suppressPackageStartupMessages(c(
library(tidyverse),
library(knitr),
library(statTarget),
library(impute),
library(cowplot),
library(proBatch),
library(pcaMethods),
library(pROC)
))
FDR <- 0.05
LOG2FC <- 0.6
# get start time
start_time <- Sys.time()Short-term administration of common anesthetics does not dramatically change the endogenous peptide profile in the rat pituitary
Project and data background
In this study, we applied a non-targeted LC–MS and LC–MS/MS-based peptidomics approach to pituitary and hypothalamus tissue peptide extract collected from rats went under “No Anesthesia”, “5% Isoflurane” and “200 mg/kg Sodium Pentobarbital” anesthesia to explore differences in the profile of peptides caused by short-term anesthetics.
Rats were separated into “No Anesthesia”, “5% Isoflurane”, or “200 mg/kg Sodium Pentobarbital” groups. For each group, animals were subjected to the indicated condition prior to rapid decapitation and pituitary isolation, after which pituitaries were flash frozen. Peptides were then extracted from pituitary samples and analyzed using an LC-MS and LC-MS/MS peptidomics workflow.
Label-free peptidomics
Total umber of samples after LC-MS: 32
No: 10 samples
Iso: 11 samples
SP: 11 samples
Total number of feature provided: 237
Three step data processing:
Batch correction
Log2 transformation
EigenMS normalization
Batch correction using package statTarget evaluates the missing values and a feature will be kept if it has non-zero value for at least 50% of samples (statTarget default is 80%) in any one group (remove 71 features). It then imputes missing values for the present features and QC-based signal correction. At last, it removes features CV% > 50% (default, removes 2 features).
pheno <- "data/meta4samples.csv"
dfile = "data/data4samples.csv"
statTarget::shiftCor(pheno, dfile, QCspan = 0.25, Frule = 0.5,
degree = 2,imputeM = "KNN", ntree=500, coCV = 50)
statTarget: Signal Correction Start... Time: Thu Aug 24 15:47:43 2023
* Step 1: Data File Checking Start..., Time: Thu Aug 24 15:47:43 2023
Data Link
metaFile: data/meta4samples.csv
profileFile: data/data4samples.csv
45 Meta Samples vs 45 Profile samples
The Meta samples list (*NA, missing data from the Profile File)
[1] "20211105_QC1" "20211105_QC2" "Pituitary_08" "Pituitary_02" "Pituitary_19"
[6] "Pituitary_29" "20211105_QC3" "Pituitary_04" "Pituitary_11" "Pituitary_34"
[11] "Pituitary_06" "20211105_QC4" "20211107_QC1" "Pituitary_18" "Pituitary_16"
[16] "Pituitary_31" "Pituitary_36" "Pituitary_07" "20211107_QC2" "Pituitary_22"
[21] "Pituitary_27" "Pituitary_25" "Pituitary_32" "Pituitary_30" "20211107_QC3"
[26] "20211108_QC1" "Pituitary_35" "Pituitary_09" "Pituitary_05" "Pituitary_10"
[31] "20211108_QC2" "Pituitary_12" "Pituitary_13" "Pituitary_28" "20211108_QC4"
[36] "20211108_QC5" "20211110_QC1" "Pituitary_03" "Pituitary_21" "Pituitary_26"
[41] "Pituitary_15" "Pituitary_24" "Pituitary_17" "Pituitary_23" "20211110_QC2"
Meta-information:
Class No.
1 Iso 11
2 No 10
3 QC 13
4 SP 11
Batch No.
1 1 12
2 2 13
3 3 11
4 4 9
Metabolic profile information:
no.
QC and samples 45
Metabolites 237
* Step 2: Evaluation of Missing Value...
The number of missing value before QC based signal correction: 2174
The number of filtered variables using the modified 50 % rule : 71
* Step 3: Imputation start...
The imputation method was set at 'KNN'
The number of missing value after imputation: 0
Imputation Finished!
* Step 4: QC-based Signal Correction Start... Time: Thu Aug 24 15:47:43 2023
The Signal Correction method was set at QC-RFSC
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Calculation of CV distribution of raw peaks (QC)...
CV<5% CV<10% CV<15% CV<20% CV<25% CV<30% CV<35%
Batch_1 4.8192771 19.879518 42.16867 59.63855 69.87952 81.32530 87.95181
Batch_2 14.4578313 32.530120 51.20482 71.68675 81.92771 86.14458 88.55422
Batch_3 7.8313253 22.891566 43.97590 59.63855 69.27711 77.71084 83.73494
Batch_4 22.2891566 39.156627 48.79518 61.44578 66.86747 72.28916 78.31325
Total 0.6024096 6.024096 17.46988 36.14458 48.79518 63.85542 71.68675
CV<40% CV<45% CV<50% CV<55% CV<60% CV<65% CV<70%
Batch_1 92.16867 95.78313 96.98795 97.59036 98.79518 99.39759 100.00000
Batch_2 90.36145 93.97590 95.78313 95.78313 96.38554 96.98795 96.98795
Batch_3 87.34940 89.15663 91.56627 93.37349 95.78313 97.59036 99.39759
Batch_4 82.53012 83.73494 85.54217 87.34940 87.34940 91.56627 93.37349
Total 78.31325 82.53012 84.93976 86.74699 87.95181 92.16867 92.16867
CV<75% CV<80% CV<85% CV<90% CV<95% CV<100%
Batch_1 100.00000 100.00000 100.00000 100.00000 100.00000 100.00000
Batch_2 98.19277 98.79518 98.79518 98.79518 98.79518 98.79518
Batch_3 99.39759 99.39759 99.39759 99.39759 99.39759 100.00000
Batch_4 93.37349 95.18072 96.38554 97.59036 98.19277 98.19277
Total 94.57831 96.38554 97.59036 98.19277 98.79518 99.39759
Calculation of CV distribution of corrected peaks (QC)...
CV<5% CV<10% CV<15% CV<20% CV<25% CV<30% CV<35%
Batch_1 13.253012 46.98795 66.86747 81.32530 90.36145 95.18072 96.98795
Batch_2 16.265060 50.00000 74.69880 84.33735 92.16867 93.37349 95.78313
Batch_3 13.253012 43.37349 68.67470 80.72289 87.34940 90.36145 93.37349
Batch_4 27.710843 49.39759 64.45783 70.48193 76.50602 81.92771 83.73494
Total 4.819277 34.33735 62.65060 78.91566 89.15663 92.77108 96.38554
CV<40% CV<45% CV<50% CV<55% CV<60% CV<65% CV<70%
Batch_1 98.19277 99.39759 99.39759 99.39759 100.00000 100.00000 100.00000
Batch_2 96.98795 96.98795 96.98795 97.59036 98.19277 98.19277 98.79518
Batch_3 94.57831 95.18072 96.38554 97.59036 99.39759 99.39759 100.00000
Batch_4 84.93976 87.34940 89.15663 89.15663 91.56627 94.57831 95.18072
Total 97.59036 98.19277 98.79518 99.39759 100.00000 100.00000 100.00000
CV<75% CV<80% CV<85% CV<90% CV<95% CV<100%
Batch_1 100.00000 100.00000 100.00000 100.00000 100.00000 100.00000
Batch_2 99.39759 99.39759 99.39759 99.39759 99.39759 99.39759
Batch_3 100.00000 100.00000 100.00000 100.00000 100.00000 100.00000
Batch_4 95.78313 95.78313 97.59036 98.19277 98.79518 98.79518
Total 100.00000 100.00000 100.00000 100.00000 100.00000 100.00000
* Step 5: Removal of the features (CV% > 50%) Thu Aug 24 15:47:45 2023
No. of removed features: 2
Feature name: FPAMPLSSLFANAVLRAQHLHQLAA SVFQELGKLTGPSNQ
Output Link: C:/Users/qiuha/Documents/repos/2022-09-short-term-anesthetics
Correction Finished! Time: Thu Aug 24 15:47:45 2023
####################################
# Software Version: statTarget 2.0 + #
# Email: luanhm@sustech.edu.cn#
####################################
fh = read.csv(file = "statTarget/shiftCor/After_shiftCor/shift_sample_cor.csv",header = TRUE, row.names = 1, stringsAsFactors = FALSE, sep = ",") %>%
t(.) %>%
as.data.frame()
labels_d1 <- as.matrix(fh[1,])
N_feature = nrow(fh[-1,])
# change row annotation for heatmap
fh_mod = read.csv(file = "statTarget/shiftCor/After_shiftCor/shift_sample_cor_mod.csv",header = TRUE, row.names = 1, stringsAsFactors = FALSE, sep = ",") %>%
t(.) %>%
as.data.frame()
feature_name = as.matrix(fh_mod[-1, "sample"]) %>%
`rownames<-`(rownames(fh_mod)[-1]) %>%
`colnames<-`("name") %>%
as.data.frame() %>%
rownames_to_column(., var = "variable")- Features = 164
Data preview (after batch correction)
#rownames(fh)[-1] == feature_name$variable
rownames(fh)[-1] = feature_name$name
# display table
fh %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")| Pituitary_08 | Pituitary_02 | Pituitary_19 | Pituitary_29 | Pituitary_04 | Pituitary_11 | Pituitary_34 | Pituitary_06 | Pituitary_18 | Pituitary_16 | Pituitary_31 | Pituitary_36 | Pituitary_07 | Pituitary_22 | Pituitary_27 | Pituitary_25 | Pituitary_32 | Pituitary_30 | Pituitary_35 | Pituitary_09 | Pituitary_05 | Pituitary_10 | Pituitary_12 | Pituitary_13 | Pituitary_28 | Pituitary_03 | Pituitary_21 | Pituitary_26 | Pituitary_15 | Pituitary_24 | Pituitary_17 | Pituitary_23 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| class | Iso | SP | SP | SP | No | SP | Iso | No | Iso | Iso | No | Iso | Iso | SP | Iso | No | No | SP | Iso | Iso | No | SP | SP | No | SP | SP | SP | Iso | No | No | Iso | No |
| DEGHDPVHESPVDTA | 1885.7614 | 315.3773 | 5940.4819 | 135.5291 | 1015.4994 | 302.0235 | 2999.2699 | 649.8108 | 1280.2935 | 722.2982 | 1153.7843 | 2001.9463 | 211.4300 | 2082.8823 | 2624.8567 | 958.5509 | 666.9202 | 858.3076 | 2244.9717 | 921.7080 | 1067.9333 | 947.9673 | 561.3494 | 641.6501 | 956.4846 | 1058.5586 | 310.0060 | 2063.2849 | 408.2306 | 2649.9505 | 1156.1560 | 849.2119 |
| DPVHESPVDT | 732.6329 | 1028.5337 | 4014.5885 | 645.3079 | 1365.0321 | 518.5349 | 1767.1760 | 931.1086 | 1093.1979 | 725.0139 | 832.0198 | 1024.3551 | 811.7260 | 2973.6974 | 3343.4003 | 1367.4623 | 562.9294 | 887.9356 | 608.4752 | 375.6075 | 395.4023 | 648.7069 | 1568.6965 | 693.4634 | 1155.6097 | 724.7612 | 573.5684 | 689.6006 | 976.6171 | 1945.9155 | 626.5572 | 1047.4822 |
| DPVHESPVDTA | 1249.1137 | 269.6404 | 6305.0354 | 314.6987 | 788.2289 | 413.4529 | 1671.1142 | 1041.6092 | 1586.0529 | 512.8198 | 728.3193 | 1046.6516 | 856.0159 | 1716.1729 | 2391.0070 | 669.6986 | 1153.6444 | 979.8788 | 719.5391 | 1025.1596 | 568.6508 | 1004.2004 | 988.5371 | 512.0745 | 1259.7007 | 591.2937 | 322.2202 | 368.7119 | 342.4587 | 1602.4915 | 306.4919 | 1318.2449 |
| ELDQLLHY | 702.2578 | 365.8359 | 4251.8036 | 1571.6784 | 818.7707 | 204.8281 | 548.8078 | 1249.4069 | 1377.3863 | 449.4381 | 1092.2277 | 1050.3928 | 405.4825 | 714.6567 | 681.3714 | 356.4057 | 910.9059 | 227.7265 | 762.3889 | 1083.0735 | 806.1698 | 941.2577 | 564.2068 | 173.3851 | 2153.8141 | 422.9277 | 195.3941 | 385.4104 | 326.4447 | 666.9212 | 535.5579 | 1164.0806 |
| FNPYFDPL | 1012.0995 | 1174.4848 | 4748.8101 | 649.8372 | 3131.5785 | 663.5226 | 3182.1233 | 2665.5744 | 617.9251 | 1866.7284 | 1063.6587 | 3638.0938 | 1151.2807 | 2023.1831 | 2827.5812 | 1936.8136 | 757.6929 | 805.6482 | 2777.2952 | 560.2295 | 3463.3673 | 2124.9813 | 1233.8437 | 633.3731 | 2823.7585 | 1153.8689 | 1207.7125 | 1833.1350 | 1781.8536 | 2423.5413 | 1930.4398 | 1636.6772 |
| GRGREPGAYPALDSRQE | 1326.0198 | 741.4886 | 2609.0841 | 371.7051 | 732.1204 | 282.7307 | 1629.1672 | 569.1655 | 1088.3462 | 452.7920 | 1202.4531 | 650.5798 | 821.9552 | 1038.5726 | 1869.4307 | 817.9926 | 1251.9436 | 673.1762 | 1175.8321 | 141.2280 | 542.9773 | 810.7972 | 951.2708 | 758.2593 | 499.8622 | 789.3013 | 534.0128 | 1089.2647 | 344.3161 | 1478.3604 | 765.8975 | 581.8446 |
| LDEGHDPV | 1352.2312 | 445.8310 | 3832.4791 | 777.0478 | 1438.5080 | 251.3568 | 1600.4040 | 843.0791 | 1442.6768 | 622.3652 | 1213.0130 | 2881.8211 | 1136.7183 | 1952.7677 | 2312.9188 | 1167.7425 | 886.9004 | 312.2281 | 2308.3925 | 855.7655 | 795.0504 | 904.3929 | 499.7565 | 476.4703 | 164.6228 | 892.1065 | 300.4715 | 1105.0993 | 355.4608 | 1349.2122 | 475.9357 | 816.5135 |
| LDEGHDPVHESPV | 1547.0438 | 650.3898 | 7679.6322 | 771.7960 | 769.8642 | 165.1002 | 3103.0268 | 865.4422 | 1929.8288 | 1084.3221 | 198.0825 | 3175.0574 | 1031.4638 | 1455.5047 | 3473.1354 | 1144.7176 | 1084.5068 | 299.9182 | 3416.9421 | 1056.1510 | 664.9774 | 683.5782 | 229.2458 | 415.9412 | 1493.6574 | 1065.8175 | 800.1504 | 2698.1815 | 202.4053 | 2331.9239 | 1048.6135 | 1158.4396 |
| LLDEGHDPVHESPVD | 1741.1565 | 1090.1588 | 3756.1918 | 884.2069 | 861.4507 | 1125.7106 | 2442.2998 | 1140.4123 | 1234.0712 | 1680.4794 | 1155.9844 | 3057.7296 | 862.6402 | 1932.7733 | 2695.8818 | 1171.8389 | 590.7727 | 682.0118 | 1817.5415 | 85.2088 | 775.4033 | 1532.0972 | 623.0253 | 1162.7772 | 1041.1613 | 581.7747 | 387.9955 | 1413.6271 | 455.1361 | 2254.0117 | 1409.1514 | 871.6563 |
| LLDEGHDPVHESPVDT | 1292.9461 | 727.8395 | 2871.5348 | 357.5666 | 763.6545 | 332.3108 | 2184.3169 | 1213.9746 | 1131.3937 | 834.4296 | 998.6953 | 2261.1455 | 127.0548 | 2493.7577 | 3070.0928 | 1385.4209 | 372.4030 | 1173.5596 | 1614.5206 | 508.1667 | 1150.9921 | 1232.7825 | 821.9707 | 703.1316 | 839.3849 | 520.8692 | 559.6842 | 1369.8564 | 595.1630 | 2825.5957 | 1593.6751 | 1192.8120 |
| LLDEGHDPVHESPVDTA | 1821.2518 | 1012.7140 | 4351.9482 | 389.2120 | 511.1829 | 441.6620 | 2658.6586 | 1128.6901 | 1375.4614 | 1111.2044 | 1383.9009 | 4918.6401 | 458.4301 | 3908.4387 | 5233.0015 | 1343.5484 | 826.4898 | 763.4186 | 2724.4591 | 320.7812 | 795.1379 | 1350.6451 | 547.7643 | 721.2797 | 984.9467 | 579.1084 | 530.2680 | 1587.3153 | 461.2161 | 2103.8119 | 1792.7832 | 866.6866 |
| NPYFDPLQWKNSDFE | 2315.831 | 1580.156 | 9217.402 | 1017.251 | 7296.730 | 3488.784 | 3609.369 | 3012.808 | 2046.736 | 8959.622 | 1404.903 | 4541.498 | 1877.622 | 14213.809 | 9541.547 | 9055.450 | 2924.962 | 8085.036 | 2842.615 | 5546.970 | 6866.857 | 4111.418 | 6228.018 | 5558.072 | 5908.644 | 4506.369 | 4051.180 | 3436.675 | 9120.101 | 7817.956 | 4476.410 | 4560.475 |
| PVHESPVDTA | 2300.77852 | 803.91908 | 2357.86381 | 309.89067 | 1539.94873 | 31.41495 | 1980.50268 | 1310.97757 | 1419.71810 | 962.12209 | 1255.38811 | 972.76220 | 992.69669 | 2217.74210 | 2617.66281 | 1061.10697 | 245.40621 | 925.20858 | 1975.95257 | 929.34994 | 929.95835 | 609.41952 | 795.22325 | 425.24704 | 116.20671 | 482.77038 | 143.83733 | 659.03649 | 369.24489 | 981.55417 | 617.42924 | 765.19008 |
| Q(-17.03)KIAEKFSQ | 648.762036 | 490.257675 | 2219.187855 | 1054.502744 | 794.742872 | 182.790861 | 1228.999414 | 1560.506553 | 1352.194640 | 377.652837 | 986.705687 | 1140.809235 | 582.222231 | 787.066333 | 1302.958552 | 820.774578 | 157.366233 | 351.245859 | 1311.887506 | 985.341772 | 594.580624 | 242.182839 | 198.696404 | 7.183386 | 466.777579 | 398.990761 | 185.164175 | 774.011911 | 201.941174 | 1120.168465 | 684.305249 | 793.271053 |
| Q(-17.03)KIAEKFSQR(-.98) | 1247.0467 | 874.1553 | 3823.9206 | 300.7102 | 1204.4845 | 173.7344 | 2323.7227 | 1619.5460 | 1351.1200 | 428.5257 | 900.4637 | 1145.8669 | 655.4747 | 1026.6448 | 1639.7122 | 583.8738 | 564.9869 | 297.1052 | 2100.7020 | 871.2698 | 1161.8278 | 1201.7380 | 716.0285 | 636.0017 | 530.8866 | 761.3176 | 374.0788 | 819.7205 | 217.3973 | 1286.5438 | 620.6442 | 304.5036 |
| SEES(+79.97)QEKEY | 1304.5048 | 708.6199 | 3776.0365 | 299.3200 | 2126.9291 | 445.1178 | 2065.6320 | 697.6933 | 1223.9372 | 1134.8902 | 806.8581 | 2186.6172 | 1045.8631 | 5564.9956 | 3006.3769 | 2835.2180 | 1741.5856 | 454.4371 | 2608.2801 | 211.5961 | 2598.1653 | 861.8914 | 1810.3212 | 1408.7141 | 144.6790 | 1436.5310 | 777.1765 | 1008.5372 | 299.7598 | 1386.0167 | 538.6565 | 593.7822 |
| PESAFSE | 1211.6938 | 695.0325 | 911.1187 | 973.4968 | 905.0314 | 322.1197 | 2035.2421 | 1405.9204 | 843.8562 | 1187.4995 | 2353.4191 | 4611.2728 | 789.0011 | 2653.9777 | 1681.2529 | 906.6757 | 843.9462 | 204.8347 | 2512.9213 | 453.3592 | 1107.8375 | 1081.1426 | 427.1291 | 454.6414 | 690.1588 | 618.7797 | 445.3988 | 820.9552 | 591.2599 | 968.1920 | 859.1903 | 1109.2531 |
| AGTQESVDSAKP | 560.4401 | 346.0885 | 678.1660 | 129.7240 | 476.1345 | 327.7289 | 361.6175 | 787.3637 | 938.1177 | 433.4915 | 1100.8896 | 2698.2095 | 671.6819 | 2331.0576 | 2923.6993 | 916.6193 | 1628.8233 | 419.6820 | 2185.6845 | 1198.0760 | 973.9220 | 835.0908 | 833.4672 | 747.6965 | 113.7638 | 1879.2355 | 583.4607 | 1507.5451 | 845.5982 | 726.5184 | 1303.1721 | 1211.9500 |
| AGTQESVDSAKPRVY | 786.65469 | 611.95098 | 1062.52653 | 234.17698 | 547.83079 | 556.20172 | 1293.35197 | 833.93562 | 16.80634 | 479.68096 | 2057.22056 | 4454.29566 | 615.69340 | 2471.48967 | 2327.05196 | 1019.29602 | 1060.08789 | 468.86056 | 2244.08867 | 165.77844 | 713.69729 | 1215.42453 | 649.38641 | 807.39464 | 488.83688 | 1187.05892 | 408.51697 | 2062.22508 | 499.52267 | 1215.00740 | 1785.69270 | 1300.91702 |
| EGFFRLT | 1230.1377 | 1958.8410 | 1031.6485 | 2342.0271 | 1202.3213 | 172.2985 | 734.5474 | 2043.2521 | 996.7602 | 121.5749 | 686.9833 | 449.8815 | 986.6367 | 539.9242 | 288.3618 | 143.8977 | 725.3037 | 543.0087 | 548.5690 | 875.9785 | 2127.9564 | 1540.6158 | 886.7717 | 309.9098 | 940.8420 | 424.0862 | 439.1154 | 227.6231 | 555.2341 | 543.3309 | 317.1612 | 557.2232 |
| ESVDSAKPRVY | 1444.9525 | 1526.0621 | 1054.1382 | 1418.0836 | 1134.9757 | 403.6071 | 918.2739 | 1753.6362 | 1075.5793 | 272.7140 | 1272.5725 | 729.4929 | 874.2181 | 2605.8687 | 822.5988 | 198.5225 | 1145.8385 | 716.9923 | 1290.5738 | 1497.3902 | 5531.0265 | 1912.5707 | 1913.4536 | 999.7725 | 1998.8271 | 953.8088 | 782.6134 | 489.1334 | 658.7417 | 2032.1677 | 488.5019 | 1838.7210 |
| GTQESVDSAKPRVY | 1673.2151 | 1786.4927 | 1253.6230 | 1771.3916 | 1532.8195 | 386.6178 | 1598.2296 | 3519.9155 | 1134.2284 | 378.3671 | 1906.5696 | 2594.3285 | 1047.6141 | 2248.8234 | 1145.9222 | 773.2307 | 1375.4317 | 413.2697 | 1653.5683 | 939.2444 | 2382.7143 | 2029.7196 | 1268.9284 | 1007.7866 | 1007.7835 | 895.6461 | 548.5253 | 641.8311 | 442.4100 | 1130.5244 | 754.5976 | 705.2057 |
| LVQLAGTQESVDSAKPRVY | 1331.9636 | 2794.0616 | 1436.0362 | 536.5265 | 1078.4603 | 696.1702 | 3033.9700 | 968.9630 | 1058.2805 | 2018.5515 | 2233.3309 | 5646.0535 | 156.4235 | 4772.1196 | 4037.9473 | 1114.8348 | 1002.0355 | 781.4616 | 3390.6480 | 180.3138 | 1873.3325 | 3046.3006 | 435.7611 | 926.3348 | 2082.0998 | 916.4442 | 402.5479 | 2343.6009 | 711.3025 | 3140.6866 | 2412.4114 | 994.5508 |
| SVDSAKPRVY | 1106.898314 | 1451.941429 | 1239.032496 | 1302.987221 | 2846.659473 | 109.074972 | 626.471318 | 2075.988969 | 82.015136 | 269.742415 | 767.384549 | 627.836624 | 2781.206096 | 1265.401987 | 303.368511 | 874.575888 | 1088.381466 | 6.524589 | 1296.060453 | 812.416729 | 2983.849972 | 1417.925507 | 2035.820461 | 720.520771 | 125.901795 | 473.919354 | 370.672050 | 325.123366 | 279.514976 | 414.564210 | 123.923495 | 193.166119 |
| TQESVDSAKPRVY | 1468.7893 | 2134.5727 | 1357.9288 | 2709.8731 | 1210.4051 | 327.3918 | 731.1437 | 2049.5472 | 1051.4123 | 213.2976 | 1087.2968 | 881.2536 | 3152.1248 | 995.9067 | 475.8964 | 570.2317 | 1677.3585 | 149.0985 | 939.3991 | 587.0811 | 3288.8471 | 1601.6319 | 1881.9470 | 629.5968 | 691.2469 | 638.5582 | 564.1372 | 547.0745 | 340.7952 | 618.3729 | 494.2948 | 281.4454 |
| VQLAGTQESVDSAKP | 1170.8995 | 1262.7347 | 1101.3112 | 528.3992 | 781.4343 | 599.8334 | 714.1240 | 1251.7847 | 863.4184 | 794.5367 | 1667.5972 | 3682.0400 | 853.1556 | 1468.3244 | 2184.4545 | 597.6338 | 943.4746 | 509.2556 | 1914.5201 | 347.5251 | 551.7294 | 1263.1699 | 711.5009 | 396.6861 | 1128.1892 | 819.5700 | 479.0980 | 1441.9008 | 565.8726 | 1878.2426 | 2670.0508 | 952.9319 |
| VQLAGTQESVDSAKPR | 97.70819 | 1510.03559 | 925.36166 | 926.30522 | 601.63389 | 475.83771 | 1686.01293 | 1104.29894 | 985.18240 | 680.49241 | 1216.58096 | 3304.83207 | 855.49834 | 2216.44518 | 3145.03069 | 612.99844 | 1375.25874 | 789.89220 | 3614.29275 | 312.42326 | 1088.62772 | 1094.92037 | 797.47840 | 1026.21252 | 956.30103 | 1598.53394 | 411.31508 | 2336.31883 | 422.34975 | 2472.77335 | 2084.57452 | 1169.91427 |
| VQLAGTQESVDSAKPRV | 784.5790 | 666.8922 | 878.6167 | 102.2969 | 738.2091 | 289.8594 | 850.5117 | 1250.4947 | 922.0996 | 839.8736 | 2515.6296 | 3589.5467 | 864.2456 | 2069.4518 | 1692.3907 | 775.3783 | 851.0527 | 606.3750 | 2078.8774 | 111.4160 | 512.4719 | 1041.2414 | 836.5499 | 717.1700 | 1390.9877 | 1072.6409 | 337.3271 | 2049.1140 | 429.4559 | 2383.5806 | 6652.8020 | 1191.7903 |
| VQLAGTQESVDSAKPRVY | 1134.43246 | 1379.15881 | 949.49222 | 415.87915 | 380.02975 | 480.14511 | 1074.23667 | 1097.40363 | 39.77226 | 789.38857 | 1737.23553 | 3274.86751 | 341.63741 | 2120.96662 | 2203.33426 | 724.83519 | 879.24004 | 557.63001 | 1814.78582 | 225.75926 | 871.93911 | 1261.15881 | 686.76286 | 682.76992 | 1013.51099 | 824.12285 | 513.83795 | 1584.03837 | 455.63557 | 1626.32931 | 3147.14733 | 1033.28305 |
| AEAFPLEF | 1788.8703 | 1346.4322 | 316.2812 | 954.2968 | 768.2545 | 315.1813 | 1306.4329 | 1452.6660 | 734.4082 | 3883.1150 | 514.9268 | 2339.0552 | 3916.9263 | 3173.0992 | 641.6193 | 599.4694 | 1987.2382 | 644.5480 | 2226.9926 | 5766.3201 | 5773.6078 | 3604.3808 | 855.8742 | 2983.2154 | 3106.8385 | 203.5269 | 774.9942 | 664.2808 | 342.3983 | 1481.5504 | 922.2651 | 2000.0931 |
| AEEETAGGDGRPEPSP | 1092.61332 | 387.92785 | 1358.01289 | 259.16276 | 783.96365 | 831.53928 | 1814.73843 | 456.26035 | 50.35417 | 894.39018 | 1182.53524 | 3305.74991 | 964.54242 | 4476.96183 | 2761.81928 | 1240.18000 | 1227.39591 | 958.62309 | 1633.71930 | 396.39063 | 1205.51994 | 692.28755 | 591.69938 | 887.11844 | 642.28669 | 1249.59876 | 944.58709 | 1452.00990 | 563.60828 | 1255.26137 | 537.06119 | 929.52899 |
| AEEETAGGDGRPEPSPR | 1574.16955 | 415.52800 | 403.27285 | 408.11565 | 929.66828 | 820.29554 | 1987.17175 | 689.25905 | 96.50598 | 850.47216 | 895.65337 | 1459.58967 | 1185.71522 | 4689.09203 | 2608.30744 | 1271.36900 | 1801.54109 | 1098.57328 | 1637.89042 | 193.25777 | 2295.31062 | 1267.75877 | 1131.80189 | 1460.94836 | 339.98263 | 965.14843 | 1031.43845 | 1139.12924 | 544.21438 | 850.59475 | 572.65393 | 558.27768 |
| AEEETAGGDGRPEPSPRE(-.98) | 1258.60009 | 436.80827 | 1097.59024 | 310.43784 | 870.81674 | 502.04478 | 2117.71058 | 531.86646 | 57.69867 | 754.15278 | 947.96980 | 1268.75600 | 1233.51278 | 5315.10102 | 2957.40687 | 1322.99808 | 1394.19186 | 995.00017 | 1258.72585 | 188.36687 | 1842.36201 | 731.44521 | 877.81923 | 1193.43963 | 330.77806 | 961.69672 | 901.25834 | 1047.76832 | 353.84769 | 699.66807 | 431.75720 | 597.81766 |
| EAFPLEF | 1639.8957 | 1585.5946 | 267.4349 | 4713.9483 | 3306.0716 | 573.9387 | 365.7458 | 5288.6401 | 4007.3421 | 2968.8946 | 1614.0220 | 1308.4198 | 4310.5163 | 15.3331 | 554.0825 | 1136.3919 | 1914.1394 | 1271.9689 | 1275.6955 | 6936.2383 | 3373.2907 | 2623.6705 | 827.8183 | 1330.4972 | 2466.4561 | 1141.2130 | 2214.8758 | 1016.1028 | 1579.4345 | 729.2176 | 641.7115 | 635.8778 |
| EEETAGGDGRPEPSPRE(-.98) | 1328.22810 | 374.46431 | 1740.49302 | 320.95330 | 1254.36871 | 639.88039 | 2185.70808 | 856.20888 | 50.27415 | 787.76024 | 1124.23105 | 1007.90928 | 1495.00298 | 5094.30033 | 3316.87292 | 1367.75517 | 1504.54289 | 1144.35307 | 928.38044 | 162.45855 | 1809.22625 | 811.78562 | 1148.85809 | 1256.66882 | 226.29333 | 1592.42097 | 835.04295 | 1249.51683 | 420.71781 | 802.27284 | 590.17772 | 799.19900 |
| EETAGGDGRPEPSPRE(-.98) | 964.447425 | 472.652860 | 1856.817118 | 116.773165 | 887.195075 | 53.007728 | 1668.512822 | 242.570742 | 7.467272 | 838.163143 | 317.895204 | 464.501467 | 233.065648 | 2876.114192 | 3096.100263 | 960.799828 | 843.711851 | 132.738253 | 584.050711 | 26.203379 | 2645.481483 | 286.662080 | 623.952897 | 985.981055 | 53.528463 | 689.728920 | 732.059206 | 165.648433 | 295.614002 | 310.592386 | 277.839007 | 554.548588 |
| ELEGEQPD | 2141.11730 | 536.02797 | 362.99339 | 1213.84991 | 1396.14968 | 13.78734 | 2210.19097 | 2096.72541 | 162.90587 | 1355.08064 | 1156.44958 | 1505.53182 | 962.67179 | 3290.43532 | 1477.03985 | 1563.49522 | 309.18790 | 988.93979 | 1721.71896 | 1063.48716 | 2992.95519 | 1654.75888 | 1099.93792 | 819.49398 | 161.90284 | 543.23006 | 609.99215 | 699.75075 | 546.00888 | 824.68414 | 543.06230 | 391.70203 |
| FMTSEKSQTP | 1196.0652 | 302.8209 | 376.2465 | 510.5442 | 1366.8117 | 590.7248 | 3802.7696 | 1491.1086 | 674.8852 | 1191.9260 | 452.2769 | 2075.0749 | 872.9097 | 1360.7285 | 1780.6104 | 666.3682 | 574.9578 | 490.2299 | 511.8672 | 149.2653 | 1812.2435 | 1403.9515 | 670.4395 | 928.8478 | 786.6103 | 318.1698 | 1067.5911 | 875.4247 | 246.7506 | 1235.4291 | 368.1579 | 381.3907 |
| GPYRVEHF | 2525.2346 | 841.7449 | 1364.3366 | 1497.5078 | 1161.2045 | 193.5744 | 1405.6974 | 1629.2526 | 990.5812 | 662.7851 | 867.3793 | 773.9364 | 979.9220 | 713.3220 | 463.6081 | 444.4921 | 836.0668 | 219.1525 | 1093.7493 | 1300.7445 | 1363.6070 | 2386.3122 | 453.0834 | 459.3762 | 1039.1320 | 411.5144 | 401.4586 | 454.0582 | 265.4576 | 687.8080 | 390.8547 | 195.8287 |
| GPYRVEHFRWGNPPKD | 2482.62165 | 1404.55170 | 934.04731 | 988.75643 | 813.02999 | 31.79927 | 1841.60231 | 138.25794 | 793.26428 | 1074.67207 | 1149.32524 | 87.26251 | 753.93905 | 90.90725 | 528.73505 | 704.46806 | 1385.59784 | 1068.58032 | 864.37126 | 365.48697 | 74.10039 | 1576.82324 | 851.61870 | 985.36985 | 727.11815 | 1829.93951 | 1880.06588 | 2179.54540 | 687.24710 | 1719.29117 | 2651.24339 | 329.39691 |
| KYVMGHF | 1451.6570 | 948.6784 | 969.8595 | 921.2255 | 1108.3420 | 359.1548 | 2115.4550 | 1418.9474 | 435.1711 | 528.0728 | 1145.1101 | 1190.0108 | 669.0182 | 641.4110 | 672.9088 | 409.4722 | 566.5036 | 203.2024 | 1267.9413 | 266.7916 | 1155.3978 | 2144.6600 | 396.4836 | 489.1483 | 595.2073 | 401.7588 | 456.9299 | 629.5165 | 297.8948 | 1160.6856 | 579.6359 | 518.8448 |
| KYVMGHFRWD | 1928.28899 | 795.05945 | 54.52181 | 368.64178 | 14.93975 | 276.57541 | 2047.60025 | 863.16898 | 59.08809 | 657.12215 | 1030.58860 | 367.39099 | 230.55954 | 208.99370 | 1129.14649 | 562.98735 | 414.78856 | 503.04144 | 1232.02056 | 296.50808 | 464.54342 | 1146.05922 | 360.60660 | 429.95402 | 698.42020 | 883.97179 | 579.75479 | 1455.18452 | 435.64658 | 2101.93453 | 2267.41833 | 418.06433 |
| R(+42.01)PVKVYPNVAENESAEAFPLEF | 997.4779 | 487.0765 | 602.0588 | 423.0528 | 130.7358 | 837.2039 | 6554.4891 | 659.2906 | 748.3384 | 3557.3633 | 1540.7474 | 1072.4529 | 1547.5307 | 3289.4445 | 1924.3251 | 7284.3099 | 3334.9107 | 991.4729 | 12816.9442 | 1931.4444 | 2200.3785 | 2569.8048 | 1980.2885 | 996.0205 | 2942.6119 | 1388.2738 | 4999.0705 | 10064.7952 | 1870.9952 | 7631.1690 | 4428.4504 | 4744.7683 |
| RAEEETAGGDGRPEPSPRE(-.98) | 692.57913 | 252.52215 | 502.07747 | 187.24536 | 332.31982 | 300.85759 | 3182.64458 | 962.75671 | 62.81772 | 746.45993 | 645.14877 | 451.88011 | 3786.44365 | 4037.65464 | 4037.65464 | 3117.86536 | 2804.32327 | 1170.02599 | 1264.21530 | 651.12160 | 1284.60687 | 1348.73542 | 1081.98911 | 2407.62061 | 210.42662 | 2115.32309 | 900.99857 | 1583.29711 | 334.14461 | 574.59093 | 429.45792 | 180.77972 |
| RPVKVYPNVAENE | 2171.58142 | 596.48588 | 1434.44313 | 2018.03369 | 1617.29850 | 164.75777 | 1624.75986 | 3261.25976 | 345.80038 | 637.12536 | 584.78013 | 703.62118 | 2250.15909 | 571.37660 | 383.71038 | 333.25246 | 365.01575 | 223.44422 | 517.75139 | 1247.85698 | 1759.24274 | 1022.35239 | 402.21560 | 258.34617 | 1029.18928 | 195.05981 | 216.54715 | 212.95797 | 81.24468 | 763.86829 | 214.02502 | 90.93107 |
| RPVKVYPNVAENES(+79.97)AEAFPLE | 2840.0727 | 856.2190 | 208.5560 | 1252.7173 | 594.7786 | 1105.5723 | 4294.8785 | 2179.5960 | 139.2318 | 4246.5707 | 1879.7018 | 2600.1837 | 1300.0918 | 4271.9063 | 2374.9409 | 1869.5284 | 1792.1812 | 1868.1211 | 1426.0755 | 1039.4052 | 3908.3056 | 3077.1275 | 831.2497 | 2706.8409 | 2332.4407 | 1231.2946 | 4110.8716 | 1986.5934 | 2063.0765 | 2810.7370 | 2444.1191 | 1476.6553 |
| RPVKVYPNVAENES(+79.97)AEAFPLEF | 2421.65156 | 748.26312 | 86.98168 | 924.75261 | 1824.00012 | 2931.42876 | 3364.16349 | 1722.70470 | 277.34162 | 8116.00476 | 2090.04527 | 5542.79355 | 3456.42921 | 757.95228 | 303.78728 | 3788.98737 | 3231.09497 | 3283.45993 | 5879.40138 | 3200.46272 | 17411.39149 | 6483.67055 | 7796.07546 | 14792.02738 | 8483.43958 | 8679.38581 | 22783.94652 | 10759.08585 | 19442.03006 | 15496.15641 | 11669.07535 | 9696.83727 |
| RPVKVYPNVAENESAEAFPLE | 2641.9716 | 1240.7481 | 274.1326 | 1425.4898 | 249.3012 | 495.1874 | 4440.0358 | 1810.1239 | 831.6797 | 1839.9635 | 1673.7284 | 1573.1440 | 1021.0049 | 1915.5234 | 1803.4833 | 1190.9838 | 1113.0322 | 1300.9318 | 1115.1564 | 520.2764 | 1618.7461 | 2419.0065 | 547.7051 | 767.1221 | 1853.5394 | 699.0785 | 1281.5981 | 989.2116 | 838.8879 | 1682.3850 | 1648.5382 | 997.4851 |
| RPVKVYPNVAENESAEAFPLEF | 1919.48534 | 883.63973 | 80.09351 | 1056.55269 | 469.80781 | 892.20382 | 2581.96592 | 1386.55334 | 116.51693 | 2924.39366 | 1264.24477 | 2017.24038 | 1382.60296 | 2450.96514 | 2236.21390 | 1628.35941 | 1085.14702 | 2063.80766 | 2876.48529 | 1006.94549 | 2548.98781 | 2992.61696 | 1610.80989 | 2204.69434 | 4015.56385 | 1834.65876 | 3922.37390 | 3012.95253 | 2501.16286 | 4789.62727 | 2498.21664 | 2473.39992 |
| RRPVKVYPNVAENESAEAFPLEF | 1717.4102 | 1108.8910 | 749.2999 | 1200.9545 | 1267.4521 | 1054.7058 | 1825.9609 | 1670.8577 | 927.7872 | 1032.0617 | 2246.7690 | 1412.4723 | 1194.4507 | 1260.2467 | 1203.0667 | 1717.0851 | 1191.1144 | 1768.1437 | 1624.2985 | 1234.0561 | 759.0524 | 2996.9964 | 1342.6011 | 1223.2796 | 2179.1850 | 1500.6163 | 775.8288 | 2077.3838 | 1235.0924 | 2172.3807 | 2291.7981 | 904.5234 |
| S(+42.01)MEHFRWGKPV(-.98) | 2414.13426 | 1504.70012 | 79.70621 | 569.33004 | 344.42896 | 129.51668 | 1088.47909 | 1352.81428 | 793.40739 | 448.15442 | 1408.97276 | 597.10736 | 428.45871 | 483.39155 | 1577.86298 | 510.75333 | 512.89719 | 328.20294 | 938.73701 | 206.37087 | 1347.73066 | 1304.56491 | 358.89967 | 508.63926 | 1159.89186 | 1135.46111 | 754.67912 | 1125.24013 | 579.48697 | 1173.29368 | 1915.03106 | 241.85134 |
| S(+42.01)YSMEHF | 1672.58536 | 1502.93742 | 82.01351 | 1162.26243 | 452.29551 | 1018.88074 | 1148.14621 | 1771.10306 | 139.83983 | 1231.85198 | 1651.30925 | 3184.47518 | 472.77208 | 1468.34887 | 1000.14414 | 421.47607 | 706.61352 | 303.51185 | 644.09442 | 553.60491 | 2927.21309 | 4168.35144 | 584.28180 | 856.63626 | 1051.32769 | 346.44472 | 1497.24054 | 433.29234 | 1077.98192 | 1585.22054 | 943.23091 | 325.93320 |
| S(+42.01)YSMEHFRWGKPV(-.98) | 1332.19172 | 1406.05582 | 90.83699 | 365.90674 | 333.95789 | 206.14995 | 1785.51924 | 1174.24858 | 36.30687 | 998.57360 | 1303.01738 | 717.62239 | 412.94762 | 795.93473 | 1694.16828 | 496.92378 | 640.11037 | 640.11037 | 671.29245 | 326.56063 | 1777.56381 | 1576.52981 | 716.23443 | 835.60684 | 1214.81470 | 990.67336 | 1404.53168 | 975.15367 | 726.60018 | 1463.87500 | 1756.13274 | 218.02944 |
| SAEAFPLEF | 1573.70324 | 780.53660 | 53.36996 | 5639.80461 | 3141.84022 | 207.11572 | 349.42454 | 5413.03302 | 5382.04813 | 261.65689 | 595.08729 | 315.99641 | 3376.39999 | 921.10576 | 269.75240 | 489.34919 | 386.62823 | 154.87222 | 533.35321 | 5612.33998 | 3261.93087 | 2413.82885 | 941.98808 | 260.45753 | 2806.93554 | 675.72435 | 438.01999 | 223.26262 | 278.28813 | 199.12396 | 132.21279 | 340.30423 |
| SMEHFRWGKPV(-.98) | 1302.15233 | 1957.45626 | 209.82418 | 931.14747 | 776.71301 | 374.04259 | 2918.27269 | 123.10303 | 800.33600 | 1376.03061 | 793.67833 | 1005.88372 | 650.31552 | 763.87319 | 1912.05526 | 736.99571 | 329.25709 | 833.86383 | 1387.59898 | 75.43282 | 825.70860 | 1851.58897 | 279.75836 | 224.28491 | 835.60228 | 389.39199 | 535.62653 | 1203.03420 | 291.06142 | 2003.54281 | 1511.44458 | 422.23786 |
| SYSMEHF | 995.7980 | 760.6201 | 1612.3022 | 682.0463 | 434.4840 | 386.9128 | 696.6442 | 1584.4842 | 921.4873 | 1059.1935 | 1026.4011 | 3766.9841 | 421.7065 | 2385.4177 | 1269.4927 | 632.6266 | 698.8279 | 651.7055 | 358.6026 | 364.5800 | 3721.7691 | 5560.2334 | 1151.4473 | 1368.7015 | 2139.9531 | 267.5529 | 847.2509 | 410.4298 | 339.8800 | 2111.6886 | 1579.0946 | 270.9689 |
| SYSMEHFRWGKPV(-.98) | 1313.79144 | 655.48909 | 409.33255 | 188.44273 | 46.68994 | 114.92907 | 1870.57577 | 546.28697 | 37.81192 | 862.81906 | 670.56357 | 433.00215 | 370.10798 | 562.20221 | 1141.40406 | 421.34809 | 639.20991 | 760.73271 | 657.25292 | 371.45080 | 1085.45442 | 1332.61456 | 634.74826 | 1070.42672 | 1140.65342 | 332.35680 | 1039.50015 | 651.36061 | 233.72671 | 2772.76599 | 2896.24950 | 292.99268 |
| TPLVTLF | 1143.77644 | 863.09511 | 33.05753 | 5427.35486 | 2203.48835 | 230.22654 | 454.31875 | 6066.31893 | 3811.87309 | 854.96642 | 287.78231 | 334.87941 | 1955.82534 | 258.60992 | 874.97682 | 466.51352 | 343.44072 | 454.92328 | 155.01942 | 3966.96812 | 2669.25028 | 3620.04891 | 360.30394 | 459.97023 | 372.37512 | 709.04621 | 360.59350 | 462.55442 | 343.15389 | 1241.21871 | 1317.56888 | 690.06096 |
| TPLVTLFKNAIIKN | 2347.03327 | 697.13859 | 1011.01342 | 3444.72716 | 876.06795 | 101.21033 | 386.92989 | 5057.00364 | 1222.76611 | 255.59277 | 289.69354 | 555.17280 | 1966.13430 | 77.13743 | 844.87211 | 243.36315 | 315.50989 | 66.83099 | 395.85395 | 2838.66112 | 1569.20558 | 1187.22791 | 584.46029 | 84.30710 | 2341.81294 | 155.61156 | 402.04497 | 102.15001 | 178.38536 | 171.14030 | 144.53192 | 76.19674 |
| Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF | 19802.06447 | 460.46038 | 77.23413 | 3509.71024 | 15004.76037 | 35699.05812 | 13620.17264 | 16049.86922 | 4818.47998 | 133732.48766 | 4546.16359 | 49334.00316 | 12920.81035 | 44435.54340 | 23181.43409 | 30047.36098 | 8511.67570 | 7476.47190 | 7114.45767 | 26814.22042 | 37054.60032 | 12977.64804 | 2977.59892 | 55044.40509 | 1469.29554 | 4367.27254 | 15206.78160 | 1957.21353 | 61882.48662 | 8193.07200 | 6335.34056 | 10908.21795 |
| Y(+42.01)GGFMTSEK | 1851.14209 | 461.16171 | 885.37677 | 5191.13414 | 1104.43253 | 107.88225 | 317.58307 | 4428.38960 | 1087.42408 | 215.70215 | 963.51848 | 128.20553 | 1415.15655 | 232.77972 | 50.71823 | 368.43943 | 206.57147 | 489.55965 | 347.54769 | 2370.47925 | 1200.37118 | 1683.75419 | 263.52704 | 54.88632 | 1574.48443 | 79.88270 | 273.36909 | 130.79156 | 174.12497 | 78.04398 | 860.44609 | 223.70365 |
| Y(+42.01)GGFMTSEKSQ | 3048.31112 | 1634.30462 | 1096.42727 | 7793.50682 | 1504.85867 | 180.53534 | 1113.04213 | 4893.61346 | 1041.59815 | 249.67572 | 461.60871 | 274.98982 | 1666.86135 | 209.85049 | 799.92512 | 390.51011 | 405.96778 | 10.92142 | 796.11758 | 781.21794 | 2428.99926 | 2914.79911 | 580.28512 | 187.61869 | 1349.91291 | 185.85351 | 495.36233 | 206.04511 | 189.79614 | 190.84358 | 70.98919 | 294.34544 |
| Y(+42.01)GGFMTSEKSQTP | 2359.5823 | 530.9060 | 354.3483 | 947.5756 | 928.2998 | 1586.3351 | 4262.0317 | 2820.6308 | 1102.6626 | 6139.9133 | 3007.4685 | 6370.4620 | 2390.4061 | 5109.9465 | 5330.2759 | 1686.3671 | 1657.0338 | 1296.1508 | 2010.2464 | 1107.5718 | 2596.0385 | 2330.8086 | 1083.4499 | 2327.8773 | 1285.1935 | 845.7526 | 2607.8376 | 1808.9810 | 1636.7229 | 1646.7610 | 1626.5965 | 1727.4186 |
| Y(+42.01)GGFMTSEKSQTPL | 1890.5524 | 890.1351 | 829.4067 | 494.7415 | 947.6413 | 2499.0895 | 3482.9431 | 3912.7606 | 1011.5112 | 4217.9946 | 2141.2533 | 4266.0922 | 532.7789 | 2479.3919 | 2874.9370 | 1726.8917 | 1155.3556 | 1325.8179 | 1561.0180 | 1143.0749 | 2384.0112 | 3095.3694 | 519.4710 | 1241.1252 | 2846.2408 | 1305.7566 | 1252.6419 | 1680.3733 | 2381.0004 | 2116.5915 | 1964.5711 | 2701.2853 |
| Y(+42.01)GGFMTSEKSQTPLV | 1679.5974 | 891.0559 | 272.7393 | 1155.6886 | 1172.4591 | 2767.4797 | 3216.7469 | 3347.3083 | 623.9381 | 4347.0892 | 1334.3863 | 5122.7979 | 795.2875 | 3853.4215 | 2894.2729 | 1271.5324 | 1291.6477 | 1808.9979 | 1769.0802 | 1147.1083 | 4148.3174 | 3587.6156 | 561.6730 | 2103.1066 | 1991.8828 | 1514.1839 | 3252.0562 | 1533.3860 | 2851.6095 | 1293.5299 | 2442.3292 | 1741.2903 |
| Y(+42.01)GGFMTSEKSQTPLVT | 2238.2991 | 933.9005 | 93.9287 | 635.0525 | 498.6180 | 2190.9864 | 2639.0331 | 2422.2990 | 286.9569 | 3317.9396 | 1736.6666 | 4918.6429 | 791.7815 | 4125.9539 | 2729.9545 | 1472.6843 | 1075.2771 | 1778.1790 | 1365.0640 | 540.3638 | 3702.0823 | 1869.0124 | 934.2013 | 1508.5352 | 3993.5044 | 1268.0500 | 2340.0106 | 1738.6443 | 2446.4184 | 4213.1632 | 2220.6881 | 2584.9512 |
| Y(+42.01)GGFMTSEKSQTPLVTL | 2526.1387 | 807.8641 | 297.6504 | 1022.6535 | 1939.8358 | 4615.7701 | 4981.1672 | 5190.5885 | 693.3660 | 11242.4899 | 3231.3855 | 6708.3664 | 1906.0279 | 8951.0141 | 5674.7451 | 4692.7936 | 4577.0315 | 5674.0060 | 4459.5530 | 1987.2440 | 11005.5246 | 12487.9014 | 2869.3512 | 7651.6032 | 8357.3145 | 8395.7620 | 16219.6104 | 12215.1838 | 18105.9961 | 11777.0431 | 11055.2243 | 15614.0797 |
| Y(+42.01)GGFMTSEKSQTPLVTLF | 20249.9011 | 2665.5482 | 135.1795 | 6224.5429 | 42098.5507 | 193727.8441 | 38131.3940 | 70039.9302 | 7508.9752 | 366238.7303 | 23909.7801 | 137130.3061 | 49619.5187 | 162121.0470 | 44095.1697 | 85682.2316 | 36959.3846 | 51400.4686 | 43793.3459 | 79788.6761 | 286978.1573 | 358578.3414 | 11989.1627 | 214757.3324 | 8880.1365 | 15189.0568 | 118388.2165 | 64654.8194 | 762528.5737 | 195106.0964 | 123152.0751 | 139064.9836 |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK | 4449.2819 | 1023.5218 | 629.4436 | 552.6407 | 512.5445 | 5225.9444 | 4654.1233 | 5392.5907 | 979.8480 | 16967.2216 | 8237.9843 | 9857.3180 | 5135.3447 | 10183.7506 | 7031.6373 | 8815.0104 | 10294.5153 | 23976.1356 | 12396.9544 | 5945.0935 | 17092.0204 | 3377.0524 | 3730.6363 | 7181.7787 | 26491.1635 | 8826.9952 | 15488.5946 | 5894.6884 | 19999.8357 | 16499.7054 | 18287.1735 | 14987.2324 |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN | 3606.5361 | 1356.6643 | 425.1727 | 668.2726 | 899.1507 | 5438.9801 | 4614.8109 | 4367.6985 | 380.6630 | 14995.8154 | 5114.8226 | 8364.1552 | 4395.2816 | 7700.9479 | 6871.8985 | 10325.3165 | 6161.8616 | 7107.1177 | 10057.1391 | 2904.3825 | 21908.5085 | 11578.5900 | 5471.4165 | 13198.2261 | 21143.5987 | 9156.8055 | 17514.6952 | 5991.8694 | 26057.9782 | 23909.5540 | 24741.6731 | 22023.4175 |
| Y(+42.01)SMEHFRWGKPV(-.98) | 2570.54781 | 922.76075 | 58.47335 | 498.77771 | 267.74553 | 329.35579 | 2864.62580 | 1363.56467 | 880.99319 | 1040.05356 | 1044.15139 | 984.05002 | 501.76300 | 634.88220 | 1619.19569 | 595.50966 | 287.07529 | 503.98760 | 921.21387 | 499.81385 | 824.58232 | 1080.66378 | 421.15262 | 305.25804 | 832.97727 | 529.22379 | 743.13020 | 1486.26041 | 377.26292 | 1637.43361 | 1631.92036 | 501.15392 |
| YGGFMTSEKSQTPLVT | 862.44418 | 306.24218 | 1468.56263 | 78.50381 | 148.58608 | 230.08968 | 610.34886 | 2030.29961 | 707.33272 | 1040.79992 | 957.70020 | 1261.13581 | 447.43594 | 3572.92826 | 1491.18080 | 588.60416 | 1269.90535 | 625.10236 | 2564.46286 | 1707.50218 | 1728.30664 | 4416.07762 | 1111.62286 | 1041.38295 | 4545.97750 | 363.51430 | 1440.54830 | 2016.00928 | 259.60368 | 1794.44360 | 1258.55771 | 491.93625 |
| YGGFMTSEKSQTPLVTL | 2217.2064 | 972.8804 | 7864.5741 | 424.6870 | 1251.2668 | 1062.5511 | 1905.4961 | 2973.3009 | 2302.5330 | 2870.4386 | 2424.7719 | 8677.0149 | 2016.0880 | 7143.2969 | 7378.2738 | 1667.8136 | 665.8644 | 767.1069 | 3797.8193 | 911.7435 | 2829.9190 | 2278.7429 | 689.7764 | 1305.2056 | 1822.0938 | 504.1923 | 509.1627 | 583.0309 | 1622.7909 | 4254.7428 | 4175.9513 | 1422.1872 |
| YGGFMTSEKSQTPLVTLF | 1166.7785 | 1300.6537 | 494.9394 | 879.9662 | 831.8420 | 2236.7307 | 2839.1868 | 1490.2617 | 985.2785 | 19522.0565 | 1729.8214 | 7920.7987 | 1632.6994 | 8964.1245 | 2136.9881 | 4173.7291 | 1591.3818 | 4065.4831 | 4179.4488 | 1602.4214 | 11154.7698 | 13816.7036 | 3001.8755 | 19980.4832 | 5543.2279 | 9098.3142 | 10916.5076 | 7342.2473 | 9829.0264 | 14099.4422 | 16113.6483 | 6033.5451 |
| YGGFMTSEKSQTPLVTLFKNAIIKN | 801.6936 | 997.8001 | 761.2405 | 998.4241 | 1014.7552 | 605.0263 | 466.1262 | 1622.8692 | 778.9066 | 6082.6686 | 1484.1961 | 1722.1758 | 676.3977 | 2355.1457 | 1062.7664 | 1273.3868 | 1039.6679 | 4275.4256 | 3246.0436 | 1417.9440 | 2867.5134 | 757.7882 | 1415.2987 | 3742.6789 | 12978.6182 | 804.7154 | 2406.3565 | 274.0186 | 606.4966 | 7816.9887 | 8148.2930 | 1387.8961 |
| LPGLLLF | 2617.5551 | 4001.9509 | 401.9000 | 1510.0287 | 10970.5040 | 516.6418 | 372.6661 | 9559.8024 | 11805.2880 | 914.7902 | 798.9089 | 398.5133 | 6130.9744 | 2384.3979 | 538.8739 | 1241.4765 | 876.6829 | 1125.4433 | 386.1405 | 13069.4573 | 14767.3217 | 2654.6208 | 5215.6111 | 2870.2262 | 627.4914 | 1425.8802 | 4726.3510 | 2034.6941 | 3409.5923 | 2278.1160 | 2239.9032 | 1996.2605 |
| LPHLPGLLLF | 2610.7415 | 3267.2142 | 816.1083 | 1103.8026 | 2848.2715 | 300.8810 | 896.2225 | 3657.7686 | 3836.6507 | 2271.6777 | 682.4394 | 255.2394 | 3666.8194 | 280.8042 | 1208.5243 | 1949.3068 | 1021.2254 | 728.9690 | 1260.0581 | 16438.0731 | 12871.4877 | 4932.3422 | 8699.6568 | 9843.1286 | 1264.3956 | 5636.6774 | 9467.5861 | 374.9963 | 5923.4349 | 7456.6194 | 1672.1938 | 3719.7781 |
| TPLPELFDRVVML | 121.40625 | 79.41163 | 3408.89619 | 27361.48209 | 1788.80935 | 79.42314 | 426.26655 | 4397.04419 | 48376.03196 | 137.44936 | 125.60843 | 254.53592 | 14826.19877 | 794.84589 | 1071.83614 | 176.46980 | 2237.50357 | 1526.62325 | 271.71916 | 13869.96078 | 2644.13063 | 6410.27723 | 2004.16002 | 2969.75404 | 16868.09413 | 9028.70706 | 1159.10809 | 4056.29251 | 3323.22917 | 6017.36341 | 8439.14554 | 1441.32837 |
| F(+42.01)PAMPLSSLFANAVLRAQHLH | 3421.3759 | 6605.7287 | 609.2966 | 4294.3793 | 3059.9351 | 3454.5207 | 4992.8880 | 5341.2528 | 2346.5428 | 6954.2496 | 1997.0283 | 2485.7921 | 10321.9558 | 3398.4541 | 377.2753 | 12404.2042 | 1798.8780 | 4063.1344 | 14962.2605 | 4950.1811 | 1976.9799 | 8989.6634 | 5739.6362 | 3201.3152 | 1865.8553 | 735.2744 | 13304.9650 | 5655.9568 | 8349.2695 | 16537.7369 | 2465.1564 | 3746.8310 |
| FPAM(+15.99)PLSSLFANAVLR | 3255.2301 | 3768.2826 | 796.7819 | 2086.8098 | 4642.3729 | 2551.5332 | 247.8049 | 3146.5518 | 1243.4994 | 5623.7333 | 1136.3719 | 2327.3740 | 9856.1390 | 2264.8202 | 887.6879 | 3616.0185 | 8155.8752 | 1190.7523 | 2359.7055 | 8776.8050 | 29673.0081 | 5150.4962 | 17466.5812 | 13560.5525 | 2936.0263 | 956.9824 | 14290.8732 | 5764.3957 | 15243.3295 | 2087.1987 | 3915.5896 | 1210.3601 |
| FPAM(+15.99)PLSSLFANAVLRAQH | 1666.5542 | 5319.6743 | 270.2873 | 2324.5532 | 979.7854 | 2551.6114 | 1429.3293 | 2260.7374 | 1209.9685 | 1885.2049 | 847.5780 | 847.5340 | 4736.5349 | 724.5100 | 421.0874 | 642.7984 | 5659.4351 | 360.5270 | 446.9430 | 4099.1815 | 8647.6293 | 3055.8494 | 6219.5315 | 5210.9589 | 593.7642 | 465.4796 | 5051.3563 | 1746.6904 | 2042.0043 | 1191.6695 | 376.1937 | 2351.3405 |
| FPAM(+15.99)PLSSLFANAVLRAQHLH | 1490.8871 | 3990.7585 | 642.1378 | 655.7635 | 1823.6623 | 2055.7784 | 209.1228 | 1140.9750 | 892.2782 | 2119.6422 | 1390.9029 | 937.0781 | 3563.8098 | 194.1980 | 379.1971 | 300.1102 | 3491.5606 | 773.5793 | 1003.4034 | 2232.3530 | 4281.8377 | 4744.1623 | 9700.0173 | 7186.0961 | 1697.1705 | 951.3213 | 6128.2791 | 426.2509 | 4194.9080 | 2002.1764 | 435.9952 | 350.1876 |
| FPAMPLS | 1068.34641 | 2456.14935 | 455.59266 | 2901.08328 | 4733.37971 | 336.30588 | 250.41095 | 3936.01730 | 1238.14279 | 213.12937 | 279.06187 | 503.40171 | 1901.19674 | 393.91739 | 170.40789 | 221.57853 | 262.55347 | 46.82605 | 537.06079 | 1467.46050 | 1965.64537 | 1181.30026 | 1231.29443 | 265.43623 | 701.17196 | 159.35975 | 636.73512 | 146.97570 | 239.63729 | 428.44533 | 172.15624 | 281.09126 |
| FPAMPLSS | 1204.8064 | 4512.9190 | 1467.8111 | 2456.2162 | 1971.9384 | 686.6081 | 536.8247 | 2574.2500 | 935.6858 | 212.8409 | 816.3777 | 1751.5270 | 1372.8184 | 852.4849 | 570.5091 | 201.2290 | 578.0527 | 141.0617 | 785.1445 | 947.3571 | 3628.0505 | 2440.6885 | 1733.2408 | 616.0395 | 579.7279 | 403.1906 | 1541.0080 | 369.9720 | 723.0883 | 1186.4724 | 590.5848 | 383.1179 |
| FPAMPLSSL | 1286.8753 | 3741.3131 | 1912.9228 | 2628.1146 | 3700.3144 | 1416.3883 | 397.5944 | 3869.8595 | 252.0009 | 761.9295 | 1089.7972 | 2281.6608 | 2119.3669 | 1033.7339 | 586.7397 | 595.1666 | 812.7680 | 262.6326 | 1082.5006 | 938.9633 | 4687.7794 | 2667.1848 | 2223.8858 | 1036.0567 | 1304.9731 | 883.4996 | 1931.5178 | 586.6091 | 1096.3368 | 1329.4168 | 1053.0381 | 671.7053 |
| FPAMPLSSLF | 1475.8811 | 3700.3976 | 571.2236 | 4350.7708 | 7425.9673 | 766.4074 | 183.6427 | 6774.5138 | 2296.7471 | 601.5102 | 903.1957 | 1201.5230 | 7045.2939 | 1211.5349 | 341.0623 | 413.7503 | 1550.4410 | 131.1912 | 640.6707 | 3313.6992 | 9217.0998 | 2727.7336 | 3850.6723 | 1746.3612 | 1070.8167 | 710.4724 | 3081.9846 | 104.6178 | 3455.3921 | 1139.0920 | 390.3502 | 610.6355 |
| FPAMPLSSLFA | 1839.5765 | 7621.1026 | 2953.3337 | 5493.7012 | 14966.9471 | 4108.8506 | 333.2089 | 7705.1075 | 1004.1974 | 3197.0367 | 3689.3573 | 6074.7502 | 16506.5626 | 6979.1583 | 1701.4549 | 1067.8184 | 7987.0361 | 806.7986 | 2227.5160 | 6232.2826 | 64671.8328 | 16868.5697 | 34593.9989 | 23367.7276 | 6447.0772 | 10152.4982 | 52947.2060 | 1497.1722 | 63981.3506 | 19024.9772 | 6643.1478 | 6042.7694 |
| FPAMPLSSLFAN | 1972.0170 | 6183.6818 | 2488.1764 | 5281.3104 | 12561.4821 | 3732.9602 | 476.9594 | 8106.5447 | 955.8985 | 2532.2926 | 2498.7523 | 5104.4835 | 11858.9011 | 7461.0492 | 1609.6429 | 1120.1124 | 7951.5861 | 854.7210 | 3012.6771 | 6001.4959 | 53646.2757 | 16250.1340 | 33508.5099 | 15148.0619 | 5195.9248 | 6056.8617 | 37456.9080 | 1269.8157 | 32799.1241 | 16383.8030 | 5362.5701 | 5494.1669 |
| FPAMPLSSLFANA | 1846.01250 | 5559.25603 | 1932.00168 | 4362.92687 | 9503.90153 | 42.37256 | 3350.72865 | 7267.55441 | 753.62693 | 8254.95926 | 2561.67665 | 6205.36247 | 14491.03270 | 422.95160 | 2389.77135 | 2076.03577 | 8536.59493 | 4305.23324 | 4028.92985 | 7068.88407 | 80335.15646 | 1661.16764 | 55610.44759 | 31384.93824 | 11463.12516 | 13658.46446 | 68060.82292 | 1350.41315 | 81073.24443 | 28432.60781 | 10865.31799 | 17855.45205 |
| FPAMPLSSLFANAVLR | 2054.9066 | 6900.3285 | 385.5306 | 5487.0119 | 4787.3505 | 2529.9699 | 335.0111 | 6051.6238 | 1349.7004 | 2629.5886 | 2828.3359 | 3624.5485 | 20894.4559 | 2511.7389 | 1026.3796 | 1245.6723 | 8655.7486 | 963.7901 | 3722.8375 | 9360.6518 | 73143.8633 | 31305.5735 | 64060.5766 | 43528.3405 | 9601.5044 | 16579.3581 | 103620.9881 | 2502.2550 | 116169.6393 | 30758.6542 | 11947.5764 | 7151.5989 |
| FPAMPLSSLFANAVLRA | 3843.25391 | 6126.92652 | 34.04890 | 6855.48239 | 4507.94879 | 816.36486 | 141.85169 | 12051.06340 | 1147.28737 | 588.46947 | 1043.21912 | 805.49705 | 8462.24429 | 257.95054 | 78.09512 | 336.04565 | 799.60764 | 57.67205 | 1544.69532 | 6284.34066 | 8801.13195 | 4151.47733 | 1266.40677 | 4601.96997 | 2127.99391 | 1392.69261 | 11732.88971 | 273.76743 | 16043.03417 | 2991.06027 | 840.93707 | 969.94446 |
| FPAMPLSSLFANAVLRAQ | 7348.76218 | 5184.63852 | 27.25108 | 13396.53853 | 10485.70871 | 4408.00494 | 742.14799 | 16737.47440 | 2013.99573 | 6626.69563 | 10947.43017 | 28493.88473 | 85032.93159 | 12786.64545 | 7390.74648 | 6386.90166 | 38875.99606 | 6745.15145 | 16978.49642 | 33203.21482 | 65090.75163 | 32348.13111 | 26365.04984 | 62096.63053 | 5220.97368 | 15596.62830 | 88354.30099 | 1832.90299 | 114082.75433 | 20086.06777 | 10061.80591 | 3078.61226 |
| FPAMPLSSLFANAVLRAQH | 1572.94797 | 6056.50325 | 96.07448 | 3938.61899 | 1568.32075 | 1298.07339 | 245.47837 | 2747.84664 | 129.05421 | 1049.45421 | 1498.52597 | 1009.60916 | 4893.86902 | 443.31375 | 345.25089 | 483.86252 | 3400.20194 | 615.45176 | 1860.83659 | 3306.39590 | 10392.65108 | 9579.43303 | 14209.23583 | 6751.19022 | 2529.69499 | 4196.47736 | 15294.28783 | 638.92959 | 13007.29310 | 8716.19477 | 3241.39669 | 1490.25189 |
| FPAMPLSSLFANAVLRAQHLH | 1677.80007 | 6386.09024 | 78.66319 | 3425.18705 | 263.93614 | 1659.62095 | 314.23344 | 2226.00063 | 293.20284 | 1030.07273 | 2107.24388 | 1268.09112 | 3871.23527 | 128.69679 | 465.75982 | 714.94906 | 5051.56727 | 942.16527 | 1863.48097 | 3409.47487 | 4991.08850 | 12767.90081 | 13159.46006 | 7589.37826 | 2973.93421 | 3621.04932 | 15259.96082 | 759.05999 | 14292.58317 | 8057.85720 | 3360.34737 | 1360.41745 |
| FPAMPLSSLFANAVLRAQHLHQ | 1851.47698 | 6709.00366 | 79.76641 | 3465.17714 | 390.25169 | 1747.15192 | 505.47521 | 2863.13081 | 713.38784 | 1510.08573 | 2189.93552 | 1533.08955 | 5729.37465 | 314.27914 | 673.13688 | 1153.94138 | 4608.16004 | 1236.52295 | 2488.14174 | 3170.72341 | 6675.37833 | 14216.50538 | 20881.90687 | 10893.67771 | 4936.68126 | 4423.28160 | 19904.76720 | 1080.73994 | 15706.83970 | 10577.65792 | 4460.16452 | 1701.19936 |
| FPAMPLSSLFANAVLRAQHLHQL | 3097.72081 | 9842.51193 | 55.57607 | 6295.07303 | 154.13812 | 3108.16978 | 554.26735 | 5644.98798 | 1100.39431 | 2951.18408 | 4737.72967 | 3078.00238 | 7802.83406 | 50.19664 | 425.75161 | 2199.12185 | 10178.47818 | 1715.76590 | 5106.23740 | 11954.02425 | 6116.39016 | 27927.66828 | 13469.29544 | 18393.55398 | 5027.28715 | 8063.29424 | 42219.56212 | 1975.20980 | 63028.19632 | 20626.68113 | 8693.89039 | 5966.39537 |
| FPAMPLSSLFANAVLRAQHLHQLA | 3894.36232 | 11711.30697 | 51.77181 | 7356.31622 | 264.35152 | 3203.82551 | 473.26927 | 5831.16087 | 1440.07922 | 3102.71614 | 5809.42087 | 3245.16949 | 9719.36334 | 94.50447 | 378.39067 | 2081.64922 | 9637.53751 | 1762.29257 | 4563.53685 | 12090.97952 | 7513.05960 | 31379.84732 | 17665.46595 | 23460.30070 | 7949.49144 | 8665.41716 | 45006.43021 | 2206.65856 | 53435.91166 | 23251.65162 | 9731.24679 | 5812.91291 |
| FPAMPLSSLFANAVLRAQHLHQLAAD | 3851.11012 | 7418.12196 | 26.70494 | 13588.79831 | 551.32902 | 1810.86929 | 475.85175 | 13179.88801 | 2061.41155 | 1725.36953 | 2106.53172 | 1639.70064 | 14719.17320 | 90.32049 | 157.22455 | 1772.13236 | 5995.57107 | 457.61650 | 4760.48970 | 16973.10640 | 9298.81520 | 27726.69036 | 17349.21298 | 23634.78941 | 7902.64721 | 4199.70303 | 36631.50932 | 2507.66037 | 40721.06928 | 15830.27010 | 5343.07142 | 3268.36815 |
| GPVQFLSRIF | 1270.05880 | 1661.25835 | 1907.34200 | 4627.03294 | 2804.10501 | 337.05932 | 503.19917 | 5745.84195 | 11837.60915 | 476.17773 | 159.38617 | 577.28363 | 3245.33790 | 743.55653 | 1071.75082 | 78.12899 | 296.42374 | 502.34763 | 246.53783 | 8204.67634 | 1212.70099 | 1127.43295 | 1885.61832 | 560.89966 | 959.21531 | 1031.93263 | 247.04607 | 534.90102 | 469.11858 | 523.05529 | 686.93031 | 200.37761 |
| PVQFLSRIF | 803.84186 | 797.84304 | 1488.46827 | 2745.17503 | 3956.88718 | 212.22355 | 378.41690 | 6840.81447 | 9764.48198 | 95.16232 | 81.80063 | 348.34423 | 2701.92300 | 398.34421 | 889.16052 | 268.93656 | 238.69654 | 386.44922 | 149.63380 | 5134.74550 | 823.13484 | 806.18794 | 961.86490 | 126.43869 | 567.04673 | 631.84604 | 264.55974 | 47.27004 | 75.71514 | 390.66403 | 572.40100 | 623.43618 |
| SPRIGQILK | 1333.28089 | 1533.70874 | 1191.90490 | 3644.61286 | 5379.92761 | 327.47783 | 55.99582 | 4263.80291 | 1655.21946 | 49.54831 | 45.28199 | 401.91185 | 2559.99428 | 579.96172 | 919.42807 | 321.82450 | 453.06657 | 310.69172 | 290.15405 | 1171.77599 | 1061.77882 | 548.94687 | 875.91694 | 211.79959 | 528.62926 | 91.23637 | 245.21666 | 49.04333 | 69.22670 | 87.89908 | 11.80359 | 428.33760 |
| SPRIGQILKQ | 810.02758 | 521.39706 | 14.06009 | 3218.90158 | 4366.04360 | 19.58892 | 31.97756 | 4776.55666 | 4473.17821 | 46.74610 | 23.24002 | 139.00431 | 1760.90366 | 11.13479 | 13.02338 | 56.24203 | 101.95233 | 156.81812 | 98.34171 | 1845.44760 | 364.51497 | 299.18114 | 374.22671 | 45.94389 | 366.26472 | 32.29326 | 41.94627 | 11.18567 | 19.10695 | 27.05409 | 316.95087 | 62.69558 |
| TDMELLRF | 325.343566 | 163.642958 | 1480.322770 | 2063.406140 | 3609.534561 | 48.778162 | 126.240561 | 3057.285131 | 6082.149249 | 49.751678 | 738.732395 | 133.194100 | 1234.476642 | 708.977888 | 1029.204997 | 103.521999 | 270.691469 | 297.816314 | 140.915796 | 832.492055 | 241.725491 | 121.666711 | 160.904318 | 14.902548 | 300.230227 | 907.135839 | 38.221790 | 10.639055 | 433.544178 | 148.463269 | 9.278954 | 29.609912 |
| ASLDKFLASVSTVLTSKYR | 1786.9180 | 12163.9599 | 584.0004 | 2140.1570 | 2473.6909 | 1889.4524 | 3221.6436 | 1865.2009 | 1062.0330 | 2973.7274 | 5117.9128 | 2446.9535 | 1333.5249 | 3506.4079 | 1809.8464 | 3679.6227 | 9881.6847 | 1649.3172 | 768.2713 | 4372.4544 | 7162.9681 | 24894.2498 | 5272.9167 | 4017.4604 | 9108.6328 | 16618.7726 | 8860.5191 | 387.9127 | 15337.2712 | 2587.2283 | 7557.9660 | 207.7931 |
| FLASVSTVLTSKYR | 913.4171 | 7313.5086 | 1214.0830 | 1946.5729 | 556.8146 | 801.8131 | 2558.2876 | 2318.1079 | 1046.5319 | 1802.6585 | 3521.0011 | 2266.6590 | 749.1031 | 1263.7660 | 273.9064 | 1274.1134 | 2978.8483 | 304.1508 | 272.6335 | 840.2629 | 4235.2849 | 5974.7769 | 1691.1817 | 621.1636 | 1886.2092 | 1199.4390 | 1348.6978 | 1145.3901 | 1316.0498 | 839.2400 | 3381.2860 | 315.0191 |
| SLDKFLA | 468.697071 | 296.403444 | 55.314391 | 2295.791994 | 3716.926388 | 25.917030 | 8.224895 | 3162.446880 | 4014.250853 | 16.126448 | 4.802543 | 17.793792 | 1054.153364 | 31.975905 | 31.936331 | 41.552847 | 105.127265 | 185.004964 | 74.238867 | 3238.709866 | 306.804755 | 177.337500 | 119.042766 | 7.345192 | 732.339845 | 24.755719 | 5.576748 | 4.769587 | 9.546823 | 155.916133 | 24.427866 | 34.466715 |
| SLDKFLASVSTVLTSKYR | 1425.26913 | 7373.78821 | 13.83642 | 2221.62272 | 98.81217 | 1653.39181 | 2026.85164 | 1394.05723 | 732.10405 | 62.60866 | 4591.08131 | 820.49871 | 2486.35973 | 30.42651 | 1488.54046 | 130.51585 | 10796.32769 | 537.76385 | 736.97589 | 4249.84519 | 18598.73608 | 27715.76357 | 9649.33533 | 3536.86664 | 6260.02782 | 6152.20270 | 8221.46313 | 738.18243 | 10618.03977 | 3176.32401 | 5953.20702 | 768.15575 |
| SVSTVLTSKYR | 812.28167 | 3570.76844 | 407.54307 | 1522.58819 | 808.82778 | 333.47201 | 76.66810 | 1409.07874 | 944.44464 | 23.89189 | 1553.86844 | 862.53433 | 2894.67302 | 984.64332 | 93.95138 | 58.26344 | 2385.43439 | 64.79215 | 500.45590 | 946.20178 | 6361.74657 | 3371.52500 | 2030.52258 | 444.64684 | 637.38233 | 675.68587 | 510.57705 | 205.29137 | 393.59597 | 389.68613 | 471.11309 | 630.11375 |
| TPAMHASLDKFLASVSTVLTSKYR | 1256.5096 | 6597.5043 | 469.4162 | 282.4691 | 1843.0427 | 2096.5146 | 2518.3276 | 3648.5225 | 595.9504 | 282.1067 | 7892.4774 | 949.1916 | 1503.3780 | 5335.1996 | 2644.6272 | 4665.3396 | 19611.3574 | 1015.1761 | 825.7665 | 313.4042 | 4177.7012 | 20722.0637 | 7291.0028 | 2762.7342 | 4233.8820 | 7895.5997 | 5213.8931 | 141.9581 | 11216.4423 | 1120.2600 | 3526.1876 | 724.0338 |
| VHLTDAEKAAVN | 1345.42034 | 2252.11666 | 1293.85744 | 1575.28971 | 1769.73769 | 466.44249 | 192.41864 | 2604.74617 | 1184.23032 | 76.91805 | 1816.95551 | 1773.27056 | 1451.14767 | 1087.44745 | 184.89833 | 140.65059 | 2188.13998 | 205.96149 | 911.88738 | 1681.09783 | 3392.31768 | 1795.44619 | 1673.27504 | 475.15902 | 804.01064 | 1098.42313 | 499.32304 | 362.34061 | 408.03963 | 772.67400 | 414.01157 | 283.38760 |
| VHLTDAEKAAVNG | 1366.0872 | 1443.4128 | 778.7936 | 1600.4869 | 1395.1824 | 189.4421 | 180.4173 | 2665.4365 | 856.0255 | 570.1055 | 1114.2584 | 944.0933 | 520.7440 | 459.8676 | 129.9189 | 106.2973 | 1647.4348 | 142.9464 | 660.4107 | 880.0270 | 2011.8550 | 2028.4819 | 997.5653 | 394.3079 | 555.1171 | 756.5446 | 298.9375 | 232.7442 | 255.7696 | 457.8061 | 242.8736 | 175.8147 |
| AAFQKVVAGVASALAHKYH | 1345.39639 | 5271.50768 | 951.17780 | 1736.02473 | 1879.32515 | 381.94601 | 25.42779 | 1921.69401 | 1001.55261 | 563.94193 | 1196.51607 | 188.66902 | 1732.22429 | 879.59833 | 943.52845 | 54.67614 | 1841.75356 | 87.28369 | 401.63251 | 1504.50058 | 1135.81986 | 3516.71681 | 1841.68471 | 387.72310 | 1273.00253 | 1429.96560 | 1031.09359 | 372.72640 | 829.68721 | 943.74914 | 1489.76297 | 277.36805 |
| AFQKVVAGVASALAHKYH | 1072.01287 | 4811.87595 | 1046.83448 | 294.11728 | 298.39487 | 382.87195 | 885.53432 | 1713.01635 | 1029.70995 | 655.22344 | 1226.24139 | 326.52633 | 1853.64291 | 14.65113 | 950.47143 | 694.70669 | 1930.27343 | 129.53019 | 327.58437 | 810.39826 | 1189.06670 | 2730.34834 | 1652.18584 | 401.44020 | 972.16534 | 1102.79711 | 642.25123 | 203.93132 | 531.46489 | 500.43086 | 710.02308 | 73.59277 |
| AQAAFQKVVAGVASALAHKYH | 1394.79626 | 1365.80159 | 844.93715 | 1120.06398 | 919.16746 | 480.92340 | 678.11152 | 614.85706 | 874.20482 | 47.39941 | 807.54847 | 272.44438 | 1599.36984 | 907.29057 | 1077.96206 | 696.63799 | 1818.10955 | 651.30104 | 87.51857 | 382.14340 | 772.86101 | 2612.00821 | 1257.74092 | 322.36217 | 1001.16243 | 1049.56760 | 444.12684 | 274.01788 | 405.09457 | 498.16353 | 712.06426 | 41.09146 |
| ASALAHKYH | 556.17282 | 984.81556 | 499.36596 | 1836.86375 | 1191.86397 | 203.75198 | 713.91839 | 1648.94633 | 1131.01618 | 627.77076 | 973.90105 | 603.50621 | 2594.17019 | 377.56383 | 956.27145 | 142.84726 | 1722.85763 | 34.45715 | 351.19204 | 718.21923 | 1611.49494 | 1272.71475 | 1213.15799 | 344.18763 | 392.48560 | 757.02717 | 690.52620 | 508.05554 | 257.44426 | 380.96544 | 217.79086 | 148.00339 |
| GVASALAHKYH | 1046.27394 | 1910.91624 | 625.68621 | 1719.27690 | 1186.73470 | 264.11539 | 115.24825 | 1912.41565 | 61.89201 | 67.14016 | 1196.92265 | 415.08324 | 2550.06298 | 494.22268 | 150.30293 | 124.22978 | 1851.42614 | 133.18957 | 445.78755 | 1230.45925 | 2246.11107 | 1522.36417 | 1518.26236 | 456.93858 | 601.23420 | 1146.61691 | 372.53684 | 262.54977 | 368.13577 | 469.55006 | 303.63514 | 126.87611 |
| QAAFQKVVAGVASALAHKYH | 1505.43318 | 5878.35813 | 1188.10679 | 1915.71450 | 475.07034 | 638.37577 | 1118.33862 | 1814.49161 | 1018.49093 | 627.49447 | 1182.01187 | 326.76981 | 2282.20187 | 91.50535 | 956.34754 | 88.37185 | 2582.24317 | 154.42325 | 165.45291 | 762.88127 | 971.54052 | 2405.71938 | 1499.19333 | 486.75108 | 911.76706 | 1045.04574 | 531.39249 | 90.27270 | 520.94797 | 520.58095 | 625.61044 | 116.67406 |
| VHLTDAEKA | 774.13534 | 2927.56765 | 411.72682 | 752.87189 | 1326.64242 | 25.33716 | 476.28259 | 666.97385 | 871.09902 | 46.98186 | 704.02985 | 713.08828 | 187.06991 | 1247.01268 | 113.72011 | 126.19024 | 155.11006 | 395.13726 | 280.37531 | 218.52956 | 4303.04004 | 479.87820 | 647.04116 | 190.68971 | 91.25183 | 871.04280 | 420.42864 | 136.38905 | 466.25627 | 299.40990 | 147.18890 | 150.96297 |
| GPNLVARSKEALA | 1144.10839 | 2577.05726 | 1011.27257 | 3558.18126 | 836.11273 | 228.96083 | 179.07913 | 2843.22351 | 1002.69628 | 67.57314 | 1036.07259 | 282.27333 | 1539.38884 | 275.69479 | 128.80311 | 64.87881 | 2135.75471 | 58.18972 | 942.48199 | 714.90559 | 2158.18599 | 2830.13653 | 1337.79885 | 482.64414 | 1243.78660 | 970.06988 | 446.03534 | 264.22746 | 457.91930 | 348.69890 | 583.44391 | 173.43782 |
| AKVAVLGA | 3120.02585 | 2028.01680 | 423.50199 | 6615.65245 | 9009.34349 | 197.74939 | 300.60587 | 6053.74806 | 957.33918 | 174.91235 | 601.21800 | 760.62751 | 3473.59169 | 478.47251 | 88.98529 | 397.25578 | 1398.23545 | 588.06151 | 411.83306 | 1472.74651 | 862.16125 | 1483.06673 | 1331.82109 | 508.29412 | 433.89512 | 259.67334 | 189.55391 | 642.78531 | 238.94778 | 171.28003 | 53.40606 | 293.79283 |
| SNRVVDLMAYMASKE | 1297.47645 | 2845.50008 | 978.63506 | 7229.27831 | 779.48424 | 557.96415 | 30.85284 | 2649.39569 | 797.36537 | 122.81796 | 1418.17526 | 588.44301 | 2037.19996 | 988.02555 | 999.66219 | 288.98050 | 2168.94547 | 840.68074 | 1045.87748 | 868.77741 | 4678.12766 | 3861.13407 | 2303.34351 | 568.92585 | 1025.60777 | 244.86089 | 924.29156 | 373.88010 | 553.33583 | 868.35216 | 343.24486 | 878.00052 |
| VKVGVNGF | 927.9235 | 1271.0619 | 1549.0529 | 3558.7906 | 1610.5104 | 473.2423 | 176.9835 | 2683.1348 | 820.7649 | 248.6979 | 906.8309 | 1482.5523 | 803.3213 | 734.4901 | 355.1159 | 321.4603 | 1056.8016 | 834.4021 | 578.2669 | 687.9629 | 1541.5131 | 1964.7975 | 1141.8634 | 396.5827 | 1649.7245 | 297.0105 | 366.7290 | 225.9843 | 331.1015 | 908.1633 | 158.6176 | 1063.6708 |
| VKVGVNGFGRIG | 1225.55561 | 2786.09643 | 569.30445 | 2407.78578 | 738.46810 | 155.89882 | 98.83911 | 2076.54935 | 889.32042 | 575.34020 | 1004.19218 | 483.60753 | 965.88280 | 491.00713 | 937.03389 | 133.71832 | 841.80701 | 607.86415 | 626.17326 | 818.78197 | 2045.08059 | 1987.47268 | 1177.82641 | 448.86677 | 1122.84602 | 253.79506 | 544.71259 | 325.11297 | 205.78439 | 1022.25509 | 304.00397 | 505.78242 |
| PHFLYPK | 1893.3365 | 754.6866 | 146.1770 | 741.2377 | 226.9641 | 339.0928 | 1946.3208 | 1393.3732 | 285.8685 | 443.4026 | 1330.0927 | 1110.2141 | 569.5254 | 698.5328 | 1393.3890 | 636.1447 | 782.6068 | 284.2704 | 1711.3915 | 314.6141 | 964.7403 | 1722.7505 | 483.0935 | 449.3893 | 1338.9285 | 888.2085 | 416.1447 | 1187.6830 | 320.5185 | 1313.7763 | 1276.2398 | 493.7489 |
| SQENPNTYSEDLDV | 3023.4467 | 1419.1393 | 1127.0380 | 1727.4749 | 3333.8159 | 2650.6924 | 2451.5527 | 1725.3994 | 934.0012 | 2925.7623 | 5201.2693 | 18238.2888 | 2641.3207 | 14280.8395 | 9825.2176 | 3513.0865 | 1463.5611 | 1773.1606 | 5302.8428 | 566.1948 | 4372.5570 | 2971.9088 | 649.6257 | 4785.9627 | 5994.5402 | 1121.2075 | 5478.8954 | 4380.1467 | 1928.3069 | 6248.7459 | 2458.0375 | 4575.5035 |
| YGGFLRKYP | 1149.7152 | 1539.1348 | 94.8125 | 387.5346 | 435.0137 | 397.4971 | 1976.0868 | 676.4533 | 867.3583 | 623.3477 | 1180.2646 | 1756.0966 | 219.9302 | 969.4790 | 1905.5276 | 498.6858 | 518.9525 | 361.7811 | 2467.9811 | 310.9131 | 846.7218 | 1278.0706 | 596.3536 | 438.9287 | 622.5176 | 521.6038 | 550.4176 | 1049.1182 | 388.7402 | 1613.2434 | 1178.6253 | 458.9272 |
| YGGFLRKYPK | 1278.0204 | 1032.0067 | 1201.7402 | 429.2760 | 436.0873 | 167.4739 | 2343.5828 | 978.1891 | 953.3156 | 236.1624 | 803.7992 | 561.4016 | 615.1331 | 558.5490 | 1848.8556 | 346.1620 | 938.8720 | 291.9937 | 2066.7880 | 169.0148 | 804.6692 | 1059.4811 | 784.5632 | 628.9084 | 234.5429 | 631.1069 | 499.5146 | 976.3925 | 286.6674 | 1391.0829 | 763.8200 | 214.5899 |
| YGGFLRRI | 1216.6279 | 1423.7135 | 951.8118 | 420.5699 | 340.5957 | 352.3116 | 1685.7508 | 705.0449 | 205.0971 | 868.0460 | 927.6019 | 1178.3795 | 419.6388 | 413.1621 | 1298.5093 | 604.5657 | 550.8467 | 527.8237 | 1996.0159 | 375.2349 | 626.8084 | 1205.4008 | 669.6316 | 568.7282 | 512.4135 | 621.4927 | 615.9726 | 1037.7396 | 462.6864 | 1549.1504 | 1668.9301 | 834.3053 |
| YGGFLRRQFKVVT | 1638.1736 | 2539.6537 | 1314.2441 | 149.2022 | 952.8939 | 474.9192 | 1898.3482 | 758.7078 | 840.3499 | 623.5917 | 801.3029 | 881.8229 | 325.9479 | 178.7835 | 1204.9876 | 541.2856 | 586.0490 | 471.7487 | 2027.8143 | 454.6111 | 724.8741 | 2053.8098 | 669.9719 | 599.3727 | 920.6274 | 600.7616 | 659.2353 | 1279.8097 | 505.2111 | 1644.4202 | 1437.1965 | 498.6738 |
| MDQLAKELT | 1582.35010 | 807.38765 | 1131.09039 | 1354.12230 | 1289.60881 | 79.28444 | 1249.88565 | 2234.97042 | 1164.64529 | 565.99584 | 418.36656 | 819.53508 | 683.34181 | 2031.86904 | 3036.95729 | 963.19453 | 275.38976 | 482.43535 | 739.49276 | 888.25674 | 1534.10409 | 981.14936 | 870.65523 | 615.74857 | 294.70211 | 224.66691 | 424.10505 | 486.82481 | 199.10695 | 1710.10612 | 303.35796 | 449.08874 |
| MDQLAKELTAE | 952.3925 | 1370.8076 | 1700.3077 | 1113.9731 | 1110.0263 | 525.6043 | 1906.5338 | 1349.4814 | 1137.2977 | 930.1319 | 732.6630 | 1157.8050 | 351.9164 | 2224.9478 | 2797.6722 | 1154.2423 | 1170.5169 | 461.4009 | 5228.9187 | 995.0905 | 1638.9800 | 1012.3564 | 815.5997 | 293.3359 | 866.8870 | 801.8041 | 588.5666 | 504.4856 | 317.1163 | 2437.5926 | 1146.2034 | 1425.1129 |
| WSRMDQLAKELT | 881.2570 | 1085.0233 | 776.5337 | 961.4227 | 1622.7023 | 166.2280 | 2677.0329 | 1184.7681 | 991.0359 | 1299.9699 | 384.0406 | 846.0860 | 818.3959 | 2310.2613 | 4005.9931 | 1201.2027 | 632.2327 | 1050.9041 | 459.7984 | 592.8583 | 1475.4890 | 806.4350 | 1064.4150 | 893.5829 | 751.9164 | 380.3741 | 690.0624 | 342.8748 | 486.9687 | 2177.4126 | 760.3663 | 363.7662 |
| WSRMDQLAKELTAE | 1730.9948 | 1118.3519 | 1835.4876 | 1145.8762 | 1165.7112 | 612.7908 | 4856.8393 | 1357.4575 | 1247.3719 | 2466.7013 | 1037.2030 | 1113.4530 | 1310.3787 | 3272.1776 | 6334.8559 | 1938.1825 | 228.3252 | 1694.4612 | 1866.9656 | 963.5517 | 2512.4439 | 1180.9427 | 1409.7068 | 1381.4184 | 1508.0508 | 1446.5260 | 1309.5499 | 1129.8078 | 945.7860 | 4192.1158 | 3399.5980 | 913.7773 |
| NQEQAEQGREHL | 1456.98449 | 1001.48831 | 1303.35183 | 1002.08526 | 2290.97643 | 84.44304 | 2768.35006 | 479.54307 | 1147.62993 | 810.87317 | 797.06831 | 670.80503 | 475.20826 | 6761.47258 | 5487.95250 | 2166.29704 | 309.77102 | 937.95208 | 505.72093 | 346.80123 | 3818.66767 | 158.28101 | 1437.17522 | 2141.48625 | 496.04160 | 458.66474 | 602.15453 | 314.82839 | 158.88735 | 905.67110 | 188.26549 | 501.93433 |
| Q(-17.03)ELGKLTGPSNQ | 1552.0647 | 1648.2301 | 1551.2115 | 1039.3340 | 1289.8616 | 197.4548 | 1627.9439 | 1092.9097 | 995.1676 | 1106.6425 | 332.4412 | 1046.5612 | 660.3100 | 1826.2799 | 3644.0852 | 862.2923 | 565.9280 | 603.0708 | 826.2617 | 869.4804 | 1912.4702 | 1083.7870 | 468.8812 | 738.6140 | 690.3552 | 523.3472 | 1182.2708 | 615.6526 | 341.4543 | 1362.4885 | 688.4342 | 505.0914 |
| YEENSRENPF | 1548.7199 | 684.6272 | 3862.4733 | 343.6947 | 1067.4420 | 157.1328 | 3441.5669 | 1501.9484 | 1359.3364 | 1475.1671 | 1432.9310 | 3422.2328 | 118.7882 | 2337.2921 | 3509.2301 | 789.6380 | 257.1651 | 1017.5596 | 1670.4373 | 215.7542 | 1582.8346 | 868.0061 | 480.1287 | 595.0426 | 720.8430 | 355.8865 | 607.3304 | 870.2789 | 311.3743 | 2789.8201 | 1154.8881 | 1314.9027 |
| YKVNEYQGPVAPSGGFFLFRPRN(-.98) | 1397.2289 | 1780.6247 | 514.8561 | 1045.6669 | 1040.5740 | 181.7562 | 2214.3245 | 992.3815 | 797.3459 | 1001.9745 | 367.7714 | 364.9192 | 257.1317 | 664.0614 | 1312.6796 | 1906.0464 | 103.7824 | 2132.3606 | 961.7503 | 942.4899 | 555.2847 | 1077.3473 | 1782.3408 | 1186.5297 | 1199.7913 | 856.0402 | 1385.2345 | 702.9548 | 1094.0188 | 2703.3670 | 1101.3148 | 668.1617 |
| Q(-17.03)EPGAPAAGM | 1353.91954 | 1097.45020 | 2418.92268 | 652.63013 | 869.32176 | 381.90204 | 2133.38087 | 971.32698 | 11.00814 | 1293.02459 | 1146.17282 | 3029.91720 | 237.75127 | 2910.37191 | 3834.84299 | 899.07723 | 307.37824 | 973.36442 | 2525.07925 | 588.41284 | 1539.37877 | 1400.76172 | 789.07747 | 760.61290 | 2012.52217 | 643.37150 | 751.41303 | 1563.20745 | 750.29848 | 2569.06018 | 1051.89866 | 1368.81684 |
| Q(-17.03)EPGAPAAGM(+15.99) | 1793.1733 | 1071.9821 | 3223.6571 | 945.2703 | 804.2836 | 601.2279 | 1820.7497 | 263.2696 | 1067.3122 | 3113.6456 | 798.6134 | 1984.3290 | 948.5801 | 2149.4112 | 2890.0867 | 1655.6275 | 1095.6339 | 789.6461 | 1408.7340 | 603.1945 | 954.6112 | 1494.4603 | 825.7174 | 1271.6258 | 861.3999 | 242.4189 | 450.6964 | 1271.1949 | 584.9811 | 1912.4549 | 761.5464 | 572.5913 |
| A(+42.01)AYKLVLIRH | 1130.6869 | 2798.7301 | 1219.9993 | 2749.8439 | 627.4309 | 483.3605 | 588.0735 | 2883.4581 | 1279.9718 | 519.1375 | 580.0286 | 347.0306 | 958.6070 | 230.4244 | 890.2429 | 167.9425 | 844.8724 | 360.7447 | 324.7101 | 582.2745 | 1592.6898 | 1128.4528 | 944.8078 | 165.7048 | 491.1466 | 675.9818 | 644.5652 | 257.3025 | 299.4548 | 478.0842 | 203.7753 | 198.6627 |
| A(+42.01)AYKLVLIRHGE | 962.94646 | 1709.87070 | 249.91770 | 3667.10306 | 762.71765 | 100.71407 | 441.56558 | 2281.96655 | 1061.06447 | 66.08384 | 369.14582 | 208.92588 | 2039.95476 | 102.81385 | 872.99697 | 193.33632 | 718.62319 | 355.78043 | 211.25818 | 2204.53106 | 1643.96711 | 1100.62205 | 1618.94183 | 354.16586 | 618.43152 | 94.74124 | 431.17528 | 78.60883 | 83.46098 | 249.53941 | 536.48024 | 166.35961 |
| SVNPYLQ(-.98) | 861.0863 | 1133.2432 | 2804.9095 | 354.3044 | 1164.2967 | 395.5912 | 1818.7159 | 2474.0911 | 1225.3680 | 543.0904 | 1095.9493 | 2759.6245 | 366.9221 | 1543.7043 | 1686.3996 | 538.3506 | 498.8378 | 835.3087 | 2630.3353 | 632.0374 | 903.7555 | 642.6705 | 615.8387 | 369.2079 | 923.5098 | 402.1357 | 427.1679 | 840.9029 | 308.9180 | 983.7623 | 239.3260 | 1084.7844 |
| SVNPYLQGKRLDNVV | 1136.7172 | 1764.9882 | 2418.5940 | 981.9184 | 721.6108 | 442.6688 | 2376.7119 | 520.3494 | 1020.8072 | 1146.3761 | 739.3344 | 1170.5527 | 454.7664 | 2256.9844 | 4059.5081 | 827.5662 | 350.1608 | 670.8309 | 930.0564 | 622.8546 | 2299.1872 | 1135.1636 | 1220.3625 | 1233.2423 | 292.4447 | 599.6983 | 934.8150 | 552.0124 | 518.1111 | 3396.9080 | 1405.0847 | 1195.0940 |
| SVNPYLQGKRLDNVVA | 1458.1754 | 1204.2235 | 3443.2102 | 965.5780 | 767.0003 | 473.4469 | 2480.5397 | 1238.9487 | 1201.9355 | 884.5478 | 783.2166 | 1602.3546 | 447.7813 | 2222.7877 | 3743.6424 | 846.5899 | 483.4516 | 738.6864 | 1663.8227 | 433.6393 | 1779.9663 | 1231.7367 | 656.2566 | 679.8930 | 821.2722 | 770.6229 | 594.8650 | 800.9041 | 345.4969 | 1544.3163 | 1377.5302 | 741.2718 |
| SVPHFSEEEKEPE | 1621.8063 | 496.6782 | 4128.4777 | 874.5051 | 601.1604 | 330.3977 | 2481.2050 | 458.7201 | 1277.4479 | 621.4519 | 1229.7060 | 3207.7861 | 891.9415 | 3110.4415 | 3024.2923 | 711.8649 | 1008.0547 | 1102.7682 | 1632.4975 | 958.2405 | 1269.6327 | 452.5820 | 508.1130 | 539.8701 | 509.6546 | 565.9836 | 609.0940 | 1178.8916 | 355.8274 | 1677.9754 | 742.1111 | 1133.2732 |
| VPHFSEEEKEPE | 556.9006 | 815.5703 | 8720.0795 | 660.3865 | 921.9266 | 506.0518 | 2589.7625 | 800.5475 | 1707.2680 | 712.4423 | 1657.4476 | 1413.9127 | 227.6488 | 2146.7127 | 1889.4620 | 524.0519 | 1634.2973 | 957.7334 | 1993.0992 | 987.7303 | 400.2419 | 1252.4576 | 687.3197 | 530.0443 | 887.6660 | 401.8406 | 488.8097 | 595.4318 | 302.0400 | 1708.7992 | 587.7350 | 1287.3465 |
| IKMALQQEGFD | 1769.57725 | 1376.33786 | 373.01578 | 10242.89287 | 47.05449 | 521.62381 | 1028.89755 | 2578.28777 | 589.45486 | 608.05417 | 891.86439 | 893.99688 | 331.97509 | 979.69020 | 917.78997 | 665.51930 | 690.54742 | 196.79723 | 1151.26506 | 866.03578 | 680.48891 | 1121.25377 | 262.25859 | 297.64989 | 1009.91150 | 696.22183 | 397.79601 | 788.95306 | 723.54486 | 1241.87742 | 792.54359 | 946.08480 |
| PMFIVNTNVPRA | 1238.39392 | 2167.18936 | 467.74943 | 7004.94315 | 1521.11314 | 348.85928 | 26.91456 | 4945.96222 | 939.99257 | 111.76479 | 911.30271 | 635.27459 | 2527.43654 | 183.62449 | 1070.51707 | 902.28613 | 2146.58056 | 1016.21528 | 255.67268 | 4754.48279 | 1765.64521 | 2490.58267 | 188.51143 | 698.70543 | 993.88141 | 888.73370 | 595.88654 | 754.56892 | 319.69722 | 241.16807 | 913.51709 | 235.38004 |
| TAYAIYMLAMAAFPKKQN | 1550.99560 | 1580.39836 | 654.24231 | 4673.15936 | 2225.38457 | 383.30202 | 175.59878 | 4130.13199 | 1620.16197 | 920.43984 | 726.17127 | 1107.45584 | 4473.79235 | 805.30726 | 64.30082 | 892.66789 | 1799.38525 | 97.78010 | 1088.80995 | 4840.61074 | 4056.55182 | 4849.86942 | 3879.14502 | 1589.50332 | 3920.44357 | 622.89010 | 2121.60320 | 1673.44524 | 1465.94551 | 528.35591 | 2301.98947 | 961.40711 |
| SAVISLEGKPL | 1178.9738 | 1891.1703 | 632.0592 | 2839.5494 | 2565.9136 | 345.5368 | 770.1815 | 4071.6439 | 166.1772 | 705.9277 | 582.1840 | 441.4797 | 1407.4899 | 389.5594 | 958.1795 | 548.0644 | 845.2002 | 549.6326 | 395.1124 | 840.7462 | 1834.9788 | 1356.2887 | 836.8128 | 372.0013 | 983.7864 | 626.9566 | 721.9012 | 159.5931 | 223.4196 | 313.0009 | 754.0227 | 427.1928 |
| FPKPEGSQD | 1243.7404 | 592.0136 | 4528.2291 | 519.7172 | 2130.1338 | 355.0223 | 2197.8866 | 1323.1802 | 1539.2217 | 864.1189 | 848.7550 | 730.3689 | 928.5868 | 2608.0392 | 2311.9915 | 1492.7083 | 1411.4765 | 135.6791 | 800.3154 | 814.8332 | 1083.1008 | 778.8010 | 768.5480 | 496.0894 | 139.3005 | 660.2700 | 535.1208 | 316.7570 | 303.3757 | 1177.1758 | 371.3297 | 524.2587 |
| FPKPEGSQDKSLHN | 974.11770 | 435.55716 | 4774.31829 | 385.20068 | 711.19095 | 310.10488 | 1998.63905 | 517.32908 | 16.81933 | 493.76752 | 1137.16490 | 624.58035 | 803.36795 | 2426.10291 | 2997.63677 | 1387.19047 | 1420.02181 | 925.34208 | 1149.92103 | 164.82184 | 1431.39886 | 770.58766 | 1132.90329 | 818.50760 | 321.60727 | 1131.50997 | 622.83260 | 800.68355 | 353.58120 | 1268.67406 | 541.30093 | 561.74068 |
| SLKPEFVDIINAKQ | 1312.4377 | 4436.9343 | 694.9876 | 6800.9496 | 1620.3174 | 204.4521 | 788.4027 | 11771.3462 | 1011.8423 | 912.8782 | 586.6355 | 433.8873 | 2043.2146 | 625.4030 | 942.6093 | 218.2236 | 2128.4289 | 698.0052 | 422.8598 | 646.3211 | 2483.8293 | 2783.3499 | 2852.8205 | 731.1159 | 1652.1821 | 254.4416 | 542.5560 | 252.8342 | 903.2799 | 551.3805 | 73.5686 | 352.4842 |
| GRTLYGFGG | 1165.1965 | 2251.5875 | 1530.6159 | 2165.0778 | 1302.6051 | 367.8827 | 927.3360 | 2962.8787 | 1131.9325 | 191.6725 | 1203.8398 | 775.1868 | 835.1908 | 619.3790 | 350.4179 | 282.7213 | 850.8640 | 78.9446 | 542.7368 | 535.1921 | 1750.8438 | 1735.6190 | 788.6543 | 411.3374 | 872.9100 | 369.7414 | 531.4833 | 250.7511 | 378.5867 | 536.0139 | 401.6746 | 313.0106 |
| RTLYGFGG | 1190.57138 | 1582.37301 | 1434.01920 | 3344.26119 | 2272.53723 | 283.73569 | 220.16955 | 3503.24741 | 858.27250 | 309.17597 | 1245.30134 | 572.59477 | 1031.65783 | 550.96299 | 276.68447 | 124.86891 | 1037.03921 | 58.99698 | 334.81521 | 537.85760 | 1811.99038 | 1738.42667 | 854.03596 | 508.91184 | 1131.98790 | 339.21395 | 322.80038 | 177.99614 | 422.14510 | 467.75947 | 395.79647 | 505.54004 |
| TLYGFGG | 397.8480 | 746.7548 | 236.9991 | 3292.0774 | 2177.5969 | 185.6250 | 185.3785 | 3105.0090 | 3188.8519 | 275.2126 | 432.9219 | 209.3927 | 951.7851 | 165.5347 | 140.7230 | 150.4470 | 465.1513 | 211.8669 | 430.5752 | 1762.9758 | 1124.6496 | 886.2080 | 443.8803 | 193.2410 | 1022.6403 | 202.3814 | 211.9018 | 149.1161 | 245.4066 | 233.8977 | 150.3373 | 391.9125 |
| MQIFVKTL | 1409.97080 | 3661.18468 | 1007.04198 | 4114.37385 | 746.43352 | 510.71767 | 474.19641 | 5188.32212 | 1220.04548 | 440.47964 | 1087.95592 | 677.15255 | 678.90064 | 409.26938 | 280.06202 | 333.44831 | 481.67868 | 94.12112 | 664.63893 | 628.80350 | 1720.88314 | 1675.34445 | 579.08156 | 352.87131 | 536.55525 | 186.22950 | 494.30596 | 204.36628 | 447.36752 | 397.15928 | 225.26378 | 511.96313 |
| LLRALASSNARAQQ | 1778.7886 | 756.7937 | 174.3052 | 918.0838 | 841.1197 | 456.0759 | 2076.9113 | 915.1195 | 926.6981 | 377.3045 | 1034.2967 | 2166.3924 | 686.0243 | 2141.3909 | 2786.1964 | 826.0816 | 743.8947 | 432.6560 | 1630.1242 | 912.3070 | 1013.5384 | 983.5076 | 573.9832 | 711.3765 | 882.2147 | 1073.6794 | 419.0634 | 898.9169 | 352.8291 | 1809.5976 | 1079.2957 | 550.6347 |
| AVDQDLGPEVPPENVL(-.98) | 1376.3918 | 1652.6405 | 2155.2448 | 1352.7600 | 2797.9135 | 857.7210 | 2476.3980 | 2487.2989 | 1123.2057 | 3644.1989 | 1127.9554 | 2682.0792 | 992.5401 | 5796.8898 | 5642.5347 | 2822.5389 | 440.2493 | 994.3272 | 1956.6939 | 1068.8221 | 3888.5722 | 1572.6688 | 831.3143 | 2215.4831 | 1523.5655 | 869.8641 | 2479.7907 | 1356.1355 | 1489.5127 | 3666.5363 | 1685.8307 | 2211.5616 |
| LENSSPQAPA | 715.9376 | 788.1330 | 1293.0311 | 281.7965 | 1522.0447 | 401.9946 | 1718.1094 | 686.8244 | 1173.1739 | 600.1111 | 544.5075 | 1663.7815 | 744.3233 | 2567.9325 | 4121.3732 | 1060.6471 | 1002.7337 | 647.3608 | 1546.9273 | 1011.3563 | 1420.6429 | 1023.4015 | 841.9960 | 893.0261 | 207.0698 | 780.1970 | 525.3939 | 662.9971 | 287.1728 | 943.7927 | 299.0774 | 683.7254 |
| LENSSPQAPARRLLPP | 1196.83394 | 1366.38541 | 2234.10338 | 92.65545 | 760.72455 | 226.47525 | 2416.45900 | 703.53945 | 1124.20015 | 815.60209 | 772.95556 | 1417.54321 | 115.89976 | 2117.78560 | 4440.23115 | 782.80994 | 445.62666 | 635.71288 | 1209.98210 | 930.45302 | 1190.38518 | 834.12602 | 815.41336 | 814.57186 | 591.07096 | 689.00990 | 588.82014 | 719.39531 | 232.75541 | 2042.11439 | 1151.75252 | 699.21997 |
| SLSAASAPLAETSTPL | 1213.5055 | 1061.8173 | 2831.8125 | 730.7903 | 1936.9790 | 958.9634 | 2291.0264 | 1445.4632 | 1213.5611 | 1336.1552 | 1008.8449 | 3216.5646 | 671.7324 | 3596.0981 | 5613.5812 | 1650.6680 | 651.5720 | 1313.7602 | 1552.6675 | 1043.4800 | 1624.8444 | 1018.5592 | 816.2730 | 1104.3693 | 1218.8215 | 842.3472 | 935.2853 | 1055.7822 | 853.7529 | 2262.6801 | 1441.5462 | 1538.8658 |
| SLSAASAPLAETSTPLRL | 1821.9411 | 939.3980 | 3076.5749 | 331.2227 | 1832.4271 | 903.0306 | 2923.5353 | 1483.2780 | 1160.2203 | 2999.2267 | 992.0293 | 4971.2105 | 282.9144 | 3032.3178 | 6610.9992 | 1665.3757 | 757.3400 | 1262.2334 | 2309.1399 | 223.6952 | 1539.8381 | 943.1508 | 690.3911 | 650.1971 | 1536.0917 | 867.5319 | 678.8528 | 1468.4405 | 698.5226 | 2382.7367 | 1843.9269 | 1412.8791 |
| SSEPEAAPAPRRL | 2330.2087 | 1475.7988 | 501.0695 | 1395.8364 | 3032.3261 | 80.2223 | 984.2112 | 4026.0427 | 977.9581 | 191.0552 | 546.2145 | 490.7833 | 2054.0189 | 878.9290 | 970.9634 | 404.0801 | 819.7928 | 209.2990 | 537.4587 | 1389.2826 | 2206.1662 | 771.3588 | 1979.6622 | 673.1648 | 334.6738 | 428.0039 | 596.8494 | 308.6340 | 219.1378 | 1145.0571 | 265.2716 | 385.5026 |
Data transformation applies a mathematical transformation on individual values themselves. For mass spec data, log transformation is a good choice, as it reduces or removes the skewness of mass spec data.
d1 <- fh[-1,]
anno = data.frame(Label = as.factor(t(fh)[, "class"]))
log2_d1 <- log2(type.convert(d1)) ## log2 transformation
# save data
#write.csv(log2_d1, file.path(WORKING_DIR, "log2_transformed.csv"))
# draw histogram
hist_log2 <- ggplot_truehist(unlist(log2_d1), "Log2 Transformed")
qq_log2 <- ggplot_carqq(unlist(log2_d1), "Log2 Transformed")
pca_log2 <- ggplot_pca(log2_d1, anno, "Label","Log2 Transformed")plot_grid(hist_log2, qq_log2, pca_log2, nrow = 1)rownames(log2_d1) = feature_name$name
# display table
log2_d1 %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")| Pituitary_08 | Pituitary_02 | Pituitary_19 | Pituitary_29 | Pituitary_04 | Pituitary_11 | Pituitary_34 | Pituitary_06 | Pituitary_18 | Pituitary_16 | Pituitary_31 | Pituitary_36 | Pituitary_07 | Pituitary_22 | Pituitary_27 | Pituitary_25 | Pituitary_32 | Pituitary_30 | Pituitary_35 | Pituitary_09 | Pituitary_05 | Pituitary_10 | Pituitary_12 | Pituitary_13 | Pituitary_28 | Pituitary_03 | Pituitary_21 | Pituitary_26 | Pituitary_15 | Pituitary_24 | Pituitary_17 | Pituitary_23 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DEGHDPVHESPVDTA | 10.881 | 8.301 | 12.536 | 7.082 | 9.988 | 8.239 | 11.550 | 9.344 | 10.322 | 9.496 | 10.172 | 10.967 | 7.724 | 11.024 | 11.358 | 9.905 | 9.381 | 9.745 | 11.132 | 9.848 | 10.061 | 9.889 | 9.133 | 9.326 | 9.902 | 10.048 | 8.276 | 11.011 | 8.673 | 11.372 | 10.175 | 9.730 |
| DPVHESPVDT | 9.517 | 10.006 | 11.971 | 9.334 | 10.415 | 9.018 | 10.787 | 9.863 | 10.094 | 9.502 | 9.700 | 10.001 | 9.665 | 11.538 | 11.707 | 10.417 | 9.137 | 9.794 | 9.249 | 8.553 | 8.627 | 9.341 | 10.615 | 9.438 | 10.174 | 9.501 | 9.164 | 9.430 | 9.932 | 10.926 | 9.291 | 10.033 |
| DPVHESPVDTA | 10.287 | 8.075 | 12.622 | 8.298 | 9.622 | 8.692 | 10.707 | 10.025 | 10.631 | 9.002 | 9.508 | 10.032 | 9.741 | 10.745 | 11.223 | 9.387 | 10.172 | 9.936 | 9.491 | 10.002 | 9.151 | 9.972 | 9.949 | 9.000 | 10.299 | 9.208 | 8.332 | 8.526 | 8.420 | 10.646 | 8.260 | 10.364 |
| ELDQLLHY | 9.456 | 8.515 | 12.054 | 10.618 | 9.677 | 7.678 | 9.100 | 10.287 | 10.428 | 8.812 | 10.093 | 10.037 | 8.663 | 9.481 | 9.412 | 8.477 | 9.831 | 7.831 | 9.574 | 10.081 | 9.655 | 9.878 | 9.140 | 7.438 | 11.073 | 8.724 | 7.610 | 8.590 | 8.351 | 9.381 | 9.065 | 10.185 |
| FNPYFDPL | 9.983 | 10.198 | 12.213 | 9.344 | 11.613 | 9.374 | 11.636 | 11.380 | 9.271 | 10.866 | 10.055 | 11.829 | 10.169 | 10.982 | 11.465 | 10.919 | 9.565 | 9.654 | 11.439 | 9.130 | 11.758 | 11.053 | 10.269 | 9.307 | 11.463 | 10.172 | 10.238 | 10.840 | 10.799 | 11.243 | 10.915 | 10.677 |
| GRGREPGAYPALDSRQE | 10.373 | 9.534 | 11.349 | 8.538 | 9.516 | 8.143 | 10.670 | 9.153 | 10.088 | 8.823 | 10.232 | 9.346 | 9.683 | 10.020 | 10.868 | 9.676 | 10.290 | 9.395 | 10.199 | 7.142 | 9.085 | 9.663 | 9.894 | 9.567 | 8.965 | 9.624 | 9.061 | 10.089 | 8.428 | 10.530 | 9.581 | 9.184 |
| LDEGHDPV | 10.401 | 8.800 | 11.904 | 9.602 | 10.490 | 7.974 | 10.644 | 9.720 | 10.495 | 9.282 | 10.244 | 11.493 | 10.151 | 10.931 | 11.175 | 10.190 | 9.793 | 8.286 | 11.173 | 9.741 | 9.635 | 9.821 | 8.965 | 8.896 | 7.363 | 9.801 | 8.231 | 10.110 | 8.474 | 10.398 | 8.895 | 9.673 |
| LDEGHDPVHESPV | 10.595 | 9.345 | 12.907 | 9.592 | 9.588 | 7.367 | 11.599 | 9.757 | 10.914 | 10.083 | 7.630 | 11.633 | 10.010 | 10.507 | 11.762 | 10.161 | 10.083 | 8.228 | 11.738 | 10.045 | 9.377 | 9.417 | 7.841 | 8.700 | 10.545 | 10.058 | 9.644 | 11.398 | 7.661 | 11.187 | 10.034 | 10.178 |
| LLDEGHDPVHESPVD | 10.766 | 10.090 | 11.875 | 9.788 | 9.751 | 10.137 | 11.254 | 10.155 | 10.269 | 10.715 | 10.175 | 11.578 | 9.753 | 10.916 | 11.397 | 10.195 | 9.206 | 9.414 | 10.828 | 6.413 | 9.599 | 10.581 | 9.283 | 10.183 | 10.024 | 9.184 | 8.600 | 10.465 | 8.830 | 11.138 | 10.461 | 9.768 |
| LLDEGHDPVHESPVDT | 10.336 | 9.507 | 11.488 | 8.482 | 9.577 | 8.376 | 11.093 | 10.246 | 10.144 | 9.705 | 9.964 | 11.143 | 6.989 | 11.284 | 11.584 | 10.436 | 8.541 | 10.197 | 10.657 | 8.989 | 10.169 | 10.268 | 9.683 | 9.458 | 9.713 | 9.025 | 9.128 | 10.420 | 9.217 | 11.464 | 10.638 | 10.220 |
| LLDEGHDPVHESPVDTA | 10.831 | 9.984 | 12.087 | 8.604 | 8.998 | 8.787 | 11.376 | 10.140 | 10.426 | 10.118 | 10.435 | 12.264 | 8.841 | 11.932 | 12.353 | 10.392 | 9.691 | 9.576 | 11.412 | 8.325 | 9.635 | 10.399 | 9.097 | 9.494 | 9.944 | 9.178 | 9.051 | 10.632 | 8.849 | 11.039 | 10.808 | 9.759 |
| NPYFDPLQWKNSDFE | 11.177 | 10.626 | 13.170 | 9.990 | 12.833 | 11.769 | 11.818 | 11.557 | 10.999 | 13.129 | 10.456 | 12.149 | 10.875 | 13.795 | 13.220 | 13.145 | 11.514 | 12.981 | 11.473 | 12.437 | 12.745 | 12.005 | 12.605 | 12.440 | 12.529 | 12.138 | 11.984 | 11.747 | 13.155 | 12.933 | 12.128 | 12.155 |
| PVHESPVDTA | 11.168 | 9.651 | 11.203 | 8.276 | 10.589 | 4.973 | 10.952 | 10.356 | 10.471 | 9.910 | 10.294 | 9.926 | 9.955 | 11.115 | 11.354 | 10.051 | 7.939 | 9.854 | 10.948 | 9.860 | 9.861 | 9.251 | 9.635 | 8.732 | 6.861 | 8.915 | 7.168 | 9.364 | 8.528 | 9.939 | 9.270 | 9.580 |
| Q(-17.03)KIAEKFSQ | 9.342 | 8.937 | 11.116 | 10.042 | 9.634 | 7.514 | 10.263 | 10.608 | 10.401 | 8.561 | 9.946 | 10.156 | 9.185 | 9.620 | 10.348 | 9.681 | 7.298 | 8.456 | 10.357 | 9.944 | 9.216 | 7.920 | 7.634 | 2.845 | 8.867 | 8.640 | 7.533 | 9.596 | 7.658 | 10.130 | 9.418 | 9.632 |
| Q(-17.03)KIAEKFSQR(-.98) | 10.284 | 9.772 | 11.901 | 8.232 | 10.234 | 7.441 | 11.182 | 10.661 | 10.400 | 8.743 | 9.815 | 10.162 | 9.356 | 10.004 | 10.679 | 9.190 | 9.142 | 8.215 | 11.037 | 9.767 | 10.182 | 10.231 | 9.484 | 9.313 | 9.052 | 9.572 | 8.547 | 9.679 | 7.764 | 10.329 | 9.278 | 8.250 |
| SEES(+79.97)QEKEY | 10.349 | 9.469 | 11.883 | 8.226 | 11.055 | 8.798 | 11.012 | 9.446 | 10.257 | 10.148 | 9.656 | 11.094 | 10.030 | 12.442 | 11.554 | 11.469 | 10.766 | 8.828 | 11.349 | 7.725 | 11.343 | 9.751 | 10.822 | 10.460 | 7.177 | 10.488 | 9.602 | 9.978 | 8.228 | 10.437 | 9.073 | 9.214 |
| PESAFSE | 10.243 | 9.441 | 9.831 | 9.927 | 9.822 | 8.331 | 10.991 | 10.457 | 9.721 | 10.214 | 11.201 | 12.171 | 9.624 | 11.374 | 10.715 | 9.824 | 9.721 | 7.678 | 11.295 | 8.825 | 10.114 | 10.078 | 8.739 | 8.829 | 9.431 | 9.273 | 8.799 | 9.681 | 9.208 | 9.919 | 9.747 | 10.115 |
| AGTQESVDSAKP | 9.130 | 8.435 | 9.405 | 7.019 | 8.895 | 8.356 | 8.498 | 9.621 | 9.874 | 8.760 | 10.104 | 11.398 | 9.392 | 11.187 | 11.514 | 9.840 | 10.670 | 8.713 | 11.094 | 10.227 | 9.928 | 9.706 | 9.703 | 9.546 | 6.830 | 10.876 | 9.188 | 10.558 | 9.724 | 9.505 | 10.348 | 10.243 |
| AGTQESVDSAKPRVY | 9.620 | 9.257 | 10.053 | 7.871 | 9.098 | 9.119 | 10.337 | 9.704 | 4.071 | 8.906 | 11.006 | 12.121 | 9.266 | 11.271 | 11.184 | 9.993 | 10.050 | 8.873 | 11.132 | 7.373 | 9.479 | 10.247 | 9.343 | 9.657 | 8.933 | 10.213 | 8.674 | 11.010 | 8.964 | 10.247 | 10.802 | 10.345 |
| EGFFRLT | 10.265 | 10.936 | 10.011 | 11.194 | 10.232 | 7.429 | 9.521 | 10.997 | 9.961 | 6.926 | 9.424 | 8.813 | 9.946 | 9.077 | 8.172 | 7.169 | 9.502 | 9.085 | 9.100 | 9.775 | 11.055 | 10.589 | 9.792 | 8.276 | 9.878 | 8.728 | 8.778 | 7.831 | 9.117 | 9.086 | 8.309 | 9.122 |
| ESVDSAKPRVY | 10.497 | 10.576 | 10.042 | 10.470 | 10.148 | 8.657 | 9.843 | 10.776 | 10.071 | 8.091 | 10.314 | 9.511 | 9.772 | 11.348 | 9.684 | 7.633 | 10.162 | 9.486 | 10.334 | 10.548 | 12.433 | 10.901 | 10.902 | 9.965 | 10.965 | 9.898 | 9.612 | 8.934 | 9.364 | 10.989 | 8.932 | 10.844 |
| GTQESVDSAKPRVY | 10.708 | 10.803 | 10.292 | 10.791 | 10.582 | 8.595 | 10.642 | 11.781 | 10.147 | 8.564 | 10.897 | 11.341 | 10.033 | 11.135 | 10.162 | 9.595 | 10.426 | 8.691 | 10.691 | 9.875 | 11.218 | 10.987 | 10.309 | 9.977 | 9.977 | 9.807 | 9.099 | 9.326 | 8.789 | 10.143 | 9.560 | 9.462 |
| LVQLAGTQESVDSAKPRVY | 10.379 | 11.448 | 10.488 | 9.068 | 10.075 | 9.443 | 11.567 | 9.920 | 10.048 | 10.979 | 11.125 | 12.463 | 7.289 | 12.220 | 11.979 | 10.123 | 9.969 | 9.610 | 11.727 | 7.494 | 10.871 | 11.573 | 8.767 | 9.855 | 11.024 | 9.840 | 8.653 | 11.195 | 9.474 | 11.617 | 11.236 | 9.958 |
| SVDSAKPRVY | 10.112 | 10.504 | 10.275 | 10.348 | 11.475 | 6.769 | 9.291 | 11.020 | 6.358 | 8.075 | 9.584 | 9.294 | 11.441 | 10.305 | 8.245 | 9.772 | 10.088 | 2.706 | 10.340 | 9.666 | 11.543 | 10.470 | 10.991 | 9.493 | 6.976 | 8.888 | 8.534 | 8.345 | 8.127 | 8.695 | 6.953 | 7.594 |
| TQESVDSAKPRVY | 10.520 | 11.060 | 10.407 | 11.404 | 10.241 | 8.355 | 9.514 | 11.001 | 10.038 | 7.737 | 10.087 | 9.783 | 11.622 | 9.960 | 8.895 | 9.155 | 10.712 | 7.220 | 9.876 | 9.197 | 11.683 | 10.645 | 10.878 | 9.298 | 9.433 | 9.319 | 9.140 | 9.096 | 8.413 | 9.272 | 8.949 | 8.137 |
| VQLAGTQESVDSAKP | 10.193 | 10.302 | 10.105 | 9.045 | 9.610 | 9.228 | 9.480 | 10.290 | 9.754 | 9.634 | 10.704 | 11.846 | 9.737 | 10.520 | 11.093 | 9.223 | 9.882 | 8.992 | 10.903 | 8.441 | 9.108 | 10.303 | 9.475 | 8.632 | 10.140 | 9.679 | 8.904 | 10.494 | 9.144 | 10.875 | 11.383 | 9.896 |
| VQLAGTQESVDSAKPR | 6.610 | 10.560 | 9.854 | 9.855 | 9.233 | 8.894 | 10.719 | 10.109 | 9.944 | 9.410 | 10.249 | 11.690 | 9.741 | 11.114 | 11.619 | 9.260 | 10.425 | 9.626 | 11.819 | 8.287 | 10.088 | 10.097 | 9.639 | 10.003 | 9.901 | 10.643 | 8.684 | 11.190 | 8.722 | 11.272 | 11.026 | 10.192 |
| VQLAGTQESVDSAKPRV | 9.616 | 9.381 | 9.779 | 6.677 | 9.528 | 8.179 | 9.732 | 10.288 | 9.849 | 9.714 | 11.297 | 11.810 | 9.755 | 11.015 | 10.725 | 9.599 | 9.733 | 9.244 | 11.022 | 6.800 | 9.001 | 10.024 | 9.708 | 9.486 | 10.442 | 10.067 | 8.398 | 11.001 | 8.746 | 11.219 | 12.700 | 10.219 |
| VQLAGTQESVDSAKPRVY | 10.148 | 10.430 | 9.891 | 8.700 | 8.570 | 8.907 | 10.069 | 10.100 | 5.314 | 9.625 | 10.763 | 11.677 | 8.416 | 11.051 | 11.105 | 9.502 | 9.780 | 9.123 | 10.826 | 7.819 | 9.768 | 10.301 | 9.424 | 9.415 | 9.985 | 9.687 | 9.005 | 10.629 | 8.832 | 10.667 | 11.620 | 10.013 |
| AEAFPLEF | 10.805 | 10.395 | 8.305 | 9.898 | 9.585 | 8.300 | 10.351 | 10.504 | 9.520 | 11.923 | 9.008 | 11.192 | 11.936 | 11.632 | 9.326 | 9.228 | 10.957 | 9.332 | 11.121 | 12.493 | 12.495 | 11.816 | 9.741 | 11.543 | 11.601 | 7.669 | 9.598 | 9.376 | 8.420 | 10.533 | 9.849 | 10.966 |
| AEEETAGGDGRPEPSP | 10.094 | 8.600 | 10.407 | 8.018 | 9.615 | 9.700 | 10.826 | 8.834 | 5.654 | 9.805 | 10.208 | 11.691 | 9.914 | 12.128 | 11.431 | 10.276 | 10.261 | 9.905 | 10.674 | 8.631 | 10.235 | 9.435 | 9.209 | 9.793 | 9.327 | 10.287 | 9.884 | 10.504 | 9.139 | 10.294 | 9.069 | 9.860 |
| AEEETAGGDGRPEPSPR | 10.620 | 8.699 | 8.656 | 8.673 | 9.861 | 9.680 | 10.957 | 9.429 | 6.593 | 9.732 | 9.807 | 10.511 | 10.212 | 12.195 | 11.349 | 10.312 | 10.815 | 10.101 | 10.678 | 7.594 | 11.164 | 10.308 | 10.144 | 10.513 | 8.409 | 9.915 | 10.010 | 10.154 | 9.088 | 9.732 | 9.162 | 9.125 |
| AEEETAGGDGRPEPSPRE(-.98) | 10.298 | 8.771 | 10.100 | 8.278 | 9.766 | 8.972 | 11.048 | 9.055 | 5.850 | 9.559 | 9.889 | 10.309 | 10.269 | 12.376 | 11.530 | 10.370 | 10.445 | 9.959 | 10.298 | 7.557 | 10.847 | 9.515 | 9.778 | 10.221 | 8.370 | 9.909 | 9.816 | 10.033 | 8.467 | 9.451 | 8.754 | 9.224 |
| EAFPLEF | 10.679 | 10.631 | 8.063 | 12.203 | 11.691 | 9.165 | 8.515 | 12.369 | 11.968 | 11.536 | 10.656 | 10.354 | 12.074 | 3.939 | 9.114 | 10.150 | 10.902 | 10.313 | 10.317 | 12.760 | 11.720 | 11.357 | 9.693 | 10.378 | 11.268 | 10.156 | 11.113 | 9.989 | 10.625 | 9.510 | 9.326 | 9.313 |
| EEETAGGDGRPEPSPRE(-.98) | 10.375 | 8.549 | 10.765 | 8.326 | 10.293 | 9.322 | 11.094 | 9.742 | 5.652 | 9.622 | 10.135 | 9.977 | 10.546 | 12.315 | 11.696 | 10.418 | 10.555 | 10.160 | 9.859 | 7.344 | 10.821 | 9.665 | 10.166 | 10.295 | 7.822 | 10.637 | 9.706 | 10.287 | 8.717 | 9.648 | 9.205 | 9.642 |
| EETAGGDGRPEPSPRE(-.98) | 9.914 | 8.885 | 10.859 | 6.868 | 9.793 | 5.728 | 10.704 | 7.922 | 2.901 | 9.711 | 8.312 | 8.860 | 7.865 | 11.490 | 11.596 | 9.908 | 9.721 | 7.052 | 9.190 | 4.712 | 11.369 | 8.163 | 9.285 | 9.945 | 5.742 | 9.430 | 9.516 | 7.372 | 8.208 | 8.279 | 8.118 | 9.115 |
| ELEGEQPD | 11.064 | 9.066 | 8.504 | 10.245 | 10.447 | 3.785 | 11.110 | 11.034 | 7.348 | 10.404 | 10.175 | 10.556 | 9.911 | 11.684 | 10.528 | 10.611 | 8.272 | 9.950 | 10.750 | 10.055 | 11.547 | 10.692 | 10.103 | 9.679 | 7.339 | 9.085 | 9.253 | 9.451 | 9.093 | 9.688 | 9.085 | 8.614 |
| FMTSEKSQTP | 10.224 | 8.242 | 8.556 | 8.996 | 10.417 | 9.206 | 11.893 | 10.542 | 9.398 | 10.219 | 8.821 | 11.019 | 9.770 | 10.410 | 10.798 | 9.380 | 9.167 | 8.937 | 9.000 | 7.222 | 10.824 | 10.455 | 9.389 | 9.859 | 9.620 | 8.314 | 10.060 | 9.774 | 7.947 | 10.271 | 8.524 | 8.575 |
| GPYRVEHF | 11.302 | 9.717 | 10.414 | 10.548 | 10.181 | 7.597 | 10.457 | 10.670 | 9.952 | 9.372 | 9.761 | 9.596 | 9.937 | 9.478 | 8.857 | 8.796 | 9.707 | 7.776 | 10.095 | 10.345 | 10.413 | 11.221 | 8.824 | 8.844 | 10.021 | 8.685 | 8.649 | 8.827 | 8.052 | 9.426 | 8.610 | 7.613 |
| GPYRVEHFRWGNPPKD | 11.278 | 10.456 | 9.867 | 9.949 | 9.667 | 4.991 | 10.847 | 7.111 | 9.632 | 10.070 | 10.167 | 6.447 | 9.558 | 6.506 | 9.046 | 9.460 | 10.436 | 10.061 | 9.756 | 8.514 | 6.211 | 10.623 | 9.734 | 9.945 | 9.506 | 10.838 | 10.877 | 11.090 | 9.425 | 10.748 | 11.372 | 8.364 |
| KYVMGHF | 10.503 | 9.890 | 9.922 | 9.847 | 10.114 | 8.488 | 11.047 | 10.471 | 8.765 | 9.045 | 10.161 | 10.217 | 9.386 | 9.325 | 9.394 | 8.678 | 9.146 | 7.667 | 10.308 | 8.060 | 10.174 | 11.067 | 8.631 | 8.934 | 9.217 | 8.650 | 8.836 | 9.298 | 8.219 | 10.181 | 9.179 | 9.019 |
| KYVMGHFRWD | 10.913 | 9.635 | 5.769 | 8.526 | 3.901 | 8.112 | 11.000 | 9.753 | 5.885 | 9.360 | 10.009 | 8.521 | 7.849 | 7.707 | 10.141 | 9.137 | 8.696 | 8.975 | 10.267 | 8.212 | 8.860 | 10.162 | 8.494 | 8.748 | 9.448 | 9.788 | 9.179 | 10.507 | 8.767 | 11.038 | 11.147 | 8.708 |
| R(+42.01)PVKVYPNVAENESAEAFPLEF | 9.962 | 8.928 | 9.234 | 8.725 | 7.031 | 9.709 | 12.678 | 9.365 | 9.548 | 11.797 | 10.589 | 10.067 | 10.596 | 11.684 | 10.910 | 12.831 | 11.703 | 9.953 | 13.646 | 10.915 | 11.104 | 11.327 | 10.951 | 9.960 | 11.523 | 10.439 | 12.287 | 13.297 | 10.870 | 12.898 | 12.113 | 12.212 |
| RAEEETAGGDGRPEPSPRE(-.98) | 9.436 | 7.980 | 8.972 | 7.549 | 8.376 | 8.233 | 11.636 | 9.911 | 5.973 | 9.544 | 9.333 | 8.820 | 11.887 | 11.979 | 11.979 | 11.606 | 11.453 | 10.192 | 10.304 | 9.347 | 10.327 | 10.397 | 10.079 | 11.233 | 7.717 | 11.047 | 9.815 | 10.629 | 8.384 | 9.166 | 8.746 | 7.498 |
| RPVKVYPNVAENE | 11.085 | 9.220 | 10.486 | 10.979 | 10.659 | 7.364 | 10.666 | 11.671 | 8.434 | 9.315 | 9.192 | 9.459 | 11.136 | 9.158 | 8.584 | 8.380 | 8.512 | 7.804 | 9.016 | 10.285 | 10.781 | 9.998 | 8.652 | 8.013 | 10.007 | 7.608 | 7.759 | 7.734 | 6.344 | 9.577 | 7.742 | 6.507 |
| RPVKVYPNVAENES(+79.97)AEAFPLE | 11.472 | 9.742 | 7.704 | 10.291 | 9.216 | 10.111 | 12.068 | 11.090 | 7.121 | 12.052 | 10.876 | 11.344 | 10.344 | 12.061 | 11.214 | 10.868 | 10.808 | 10.867 | 10.478 | 10.022 | 11.932 | 11.587 | 9.699 | 11.402 | 11.188 | 10.266 | 12.005 | 10.956 | 11.011 | 11.457 | 11.255 | 10.528 |
| RPVKVYPNVAENES(+79.97)AEAFPLEF | 11.242 | 9.547 | 6.443 | 9.853 | 10.833 | 11.517 | 11.716 | 10.750 | 8.116 | 12.987 | 11.029 | 12.436 | 11.755 | 9.566 | 8.247 | 11.888 | 11.658 | 11.681 | 12.521 | 11.644 | 14.088 | 12.663 | 12.929 | 13.853 | 13.050 | 13.083 | 14.476 | 13.393 | 14.247 | 13.920 | 13.510 | 13.243 |
| RPVKVYPNVAENESAEAFPLE | 11.367 | 10.277 | 8.099 | 10.477 | 7.962 | 8.952 | 12.116 | 10.822 | 9.700 | 10.845 | 10.709 | 10.619 | 9.996 | 10.904 | 10.817 | 10.218 | 10.120 | 10.345 | 10.123 | 9.023 | 10.661 | 11.240 | 9.097 | 9.583 | 10.856 | 9.449 | 10.324 | 9.950 | 9.712 | 10.716 | 10.687 | 9.962 |
| RPVKVYPNVAENESAEAFPLEF | 10.907 | 9.787 | 6.324 | 10.045 | 8.876 | 9.801 | 11.334 | 10.437 | 6.864 | 11.514 | 10.304 | 10.978 | 10.433 | 11.259 | 11.127 | 10.669 | 10.084 | 11.011 | 11.490 | 9.976 | 11.316 | 11.547 | 10.654 | 11.106 | 11.971 | 10.841 | 11.938 | 11.557 | 11.288 | 12.226 | 11.287 | 11.272 |
| RRPVKVYPNVAENESAEAFPLEF | 10.746 | 10.115 | 9.549 | 10.230 | 10.308 | 10.043 | 10.834 | 10.706 | 9.858 | 10.011 | 11.134 | 10.464 | 10.222 | 10.299 | 10.233 | 10.746 | 10.218 | 10.788 | 10.666 | 10.269 | 9.568 | 11.549 | 10.391 | 10.257 | 11.090 | 10.551 | 9.600 | 11.021 | 10.270 | 11.085 | 11.162 | 9.821 |
| S(+42.01)MEHFRWGKPV(-.98) | 11.237 | 10.555 | 6.317 | 9.153 | 8.428 | 7.017 | 10.088 | 10.402 | 9.632 | 8.808 | 10.460 | 9.222 | 8.743 | 8.917 | 10.624 | 8.996 | 9.003 | 8.358 | 9.875 | 7.689 | 10.396 | 10.349 | 8.487 | 8.990 | 10.180 | 10.149 | 9.560 | 10.136 | 9.179 | 10.196 | 10.903 | 7.918 |
| S(+42.01)YSMEHF | 10.708 | 10.554 | 6.358 | 10.183 | 8.821 | 9.993 | 10.165 | 10.790 | 7.128 | 10.267 | 10.689 | 11.637 | 8.885 | 10.520 | 9.966 | 8.719 | 9.465 | 8.246 | 9.331 | 9.113 | 11.515 | 12.025 | 9.191 | 9.743 | 10.038 | 8.436 | 10.548 | 8.759 | 10.074 | 10.630 | 9.881 | 8.348 |
| S(+42.01)YSMEHFRWGKPV(-.98) | 10.380 | 10.457 | 6.505 | 8.515 | 8.384 | 7.688 | 10.802 | 10.198 | 5.182 | 9.964 | 10.348 | 9.487 | 8.690 | 9.637 | 10.726 | 8.957 | 9.322 | 9.322 | 9.391 | 8.351 | 10.796 | 10.623 | 9.484 | 9.707 | 10.247 | 9.952 | 10.456 | 9.929 | 9.505 | 10.516 | 10.778 | 7.768 |
| SAEAFPLEF | 10.620 | 9.608 | 5.738 | 12.461 | 11.617 | 7.694 | 8.449 | 12.402 | 12.394 | 8.032 | 9.217 | 8.304 | 11.721 | 9.847 | 8.075 | 8.935 | 8.595 | 7.275 | 9.059 | 12.454 | 11.672 | 11.237 | 9.880 | 8.025 | 11.455 | 9.400 | 8.775 | 7.803 | 8.120 | 7.638 | 7.047 | 8.411 |
| SMEHFRWGKPV(-.98) | 10.347 | 10.935 | 7.713 | 9.863 | 9.601 | 8.547 | 11.511 | 6.944 | 9.644 | 10.426 | 9.632 | 9.974 | 9.345 | 9.577 | 10.901 | 9.526 | 8.363 | 9.704 | 10.438 | 6.237 | 9.689 | 10.855 | 8.128 | 7.809 | 9.707 | 8.605 | 9.065 | 10.232 | 8.185 | 10.968 | 10.562 | 8.722 |
| SYSMEHF | 9.960 | 9.571 | 10.655 | 9.414 | 8.763 | 8.596 | 9.444 | 10.630 | 9.848 | 10.049 | 10.003 | 11.879 | 8.720 | 11.220 | 10.310 | 9.305 | 9.449 | 9.348 | 8.486 | 8.510 | 11.862 | 12.441 | 10.169 | 10.419 | 11.063 | 8.064 | 9.727 | 8.681 | 8.409 | 11.044 | 10.625 | 8.082 |
| SYSMEHFRWGKPV(-.98) | 10.360 | 9.356 | 8.677 | 7.558 | 5.545 | 6.845 | 10.869 | 9.094 | 5.241 | 9.753 | 9.389 | 8.758 | 8.532 | 9.135 | 10.157 | 8.719 | 9.320 | 9.571 | 9.360 | 8.537 | 10.084 | 10.380 | 9.310 | 10.064 | 10.156 | 8.377 | 10.022 | 9.347 | 7.869 | 11.437 | 11.500 | 8.195 |
| TPLVTLF | 10.160 | 9.753 | 5.047 | 12.406 | 11.106 | 7.847 | 8.828 | 12.567 | 11.896 | 9.740 | 8.169 | 8.387 | 10.934 | 8.015 | 9.773 | 8.866 | 8.424 | 8.829 | 7.276 | 11.954 | 11.382 | 11.822 | 8.493 | 8.845 | 8.541 | 9.470 | 8.494 | 8.853 | 8.423 | 10.278 | 10.364 | 9.431 |
| TPLVTLFKNAIIKN | 11.197 | 9.445 | 9.982 | 11.750 | 9.775 | 6.661 | 8.596 | 12.304 | 10.256 | 7.998 | 8.178 | 9.117 | 10.941 | 6.269 | 9.723 | 7.927 | 8.302 | 6.062 | 8.629 | 11.471 | 10.616 | 10.213 | 9.191 | 6.398 | 11.193 | 7.282 | 8.651 | 6.675 | 7.479 | 7.419 | 7.175 | 6.252 |
| Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF | 14.273 | 8.847 | 6.271 | 11.777 | 13.873 | 15.124 | 13.733 | 13.970 | 12.234 | 17.029 | 12.150 | 15.590 | 13.657 | 15.439 | 14.501 | 14.875 | 13.055 | 12.868 | 12.797 | 14.711 | 15.177 | 13.664 | 11.540 | 15.748 | 10.521 | 12.093 | 13.892 | 10.935 | 15.917 | 13.000 | 12.629 | 13.413 |
| Y(+42.01)GGFMTSEK | 10.854 | 8.849 | 9.790 | 12.342 | 10.109 | 6.753 | 8.311 | 12.113 | 10.087 | 7.753 | 9.912 | 7.002 | 10.467 | 7.863 | 5.664 | 8.525 | 7.690 | 8.935 | 8.441 | 11.211 | 10.229 | 10.717 | 8.042 | 5.778 | 10.621 | 6.320 | 8.095 | 7.031 | 7.444 | 6.286 | 9.749 | 7.805 |
| Y(+42.01)GGFMTSEKSQ | 11.574 | 10.674 | 10.099 | 12.928 | 10.555 | 7.496 | 10.120 | 12.257 | 10.025 | 7.964 | 8.851 | 8.103 | 10.703 | 7.713 | 9.644 | 8.609 | 8.665 | 3.449 | 9.637 | 9.610 | 11.246 | 11.509 | 9.181 | 7.552 | 10.399 | 7.538 | 8.952 | 7.687 | 7.568 | 7.576 | 6.150 | 8.201 |
| Y(+42.01)GGFMTSEKSQTP | 11.204 | 9.052 | 8.469 | 9.888 | 9.858 | 10.631 | 12.057 | 11.462 | 10.107 | 12.584 | 11.554 | 12.637 | 11.223 | 12.319 | 12.380 | 10.720 | 10.694 | 10.340 | 10.973 | 10.113 | 11.342 | 11.187 | 10.081 | 11.185 | 10.328 | 9.724 | 11.349 | 10.821 | 10.677 | 10.685 | 10.668 | 10.754 |
| Y(+42.01)GGFMTSEKSQTPL | 10.885 | 9.798 | 9.696 | 8.951 | 9.888 | 11.287 | 11.766 | 11.934 | 9.982 | 12.042 | 11.064 | 12.059 | 9.057 | 11.276 | 11.489 | 10.754 | 10.174 | 10.373 | 10.608 | 10.159 | 11.219 | 11.596 | 9.021 | 10.277 | 11.475 | 10.351 | 10.291 | 10.715 | 11.217 | 11.048 | 10.940 | 11.399 |
| Y(+42.01)GGFMTSEKSQTPLV | 10.714 | 9.799 | 8.091 | 10.175 | 10.195 | 11.434 | 11.651 | 11.709 | 9.285 | 12.086 | 10.382 | 12.323 | 9.635 | 11.912 | 11.499 | 10.312 | 10.335 | 10.821 | 10.789 | 10.164 | 12.018 | 11.809 | 9.134 | 11.038 | 10.960 | 10.564 | 11.667 | 10.583 | 11.478 | 10.337 | 11.254 | 10.766 |
| Y(+42.01)GGFMTSEKSQTPLVT | 11.128 | 9.867 | 6.553 | 9.311 | 8.962 | 11.097 | 11.366 | 11.242 | 8.165 | 11.696 | 10.762 | 12.264 | 9.629 | 12.011 | 11.415 | 10.524 | 10.070 | 10.796 | 10.415 | 9.078 | 11.854 | 10.868 | 9.868 | 10.559 | 11.963 | 10.308 | 11.192 | 10.764 | 11.256 | 12.041 | 11.117 | 11.336 |
| Y(+42.01)GGFMTSEKSQTPLVTL | 11.303 | 9.658 | 8.217 | 9.998 | 10.922 | 12.172 | 12.282 | 12.342 | 9.437 | 13.457 | 11.658 | 12.712 | 10.896 | 13.128 | 12.470 | 12.196 | 12.160 | 12.470 | 12.123 | 10.957 | 13.426 | 13.608 | 11.487 | 12.902 | 13.029 | 13.035 | 13.985 | 13.576 | 14.144 | 13.524 | 13.432 | 13.931 |
| Y(+42.01)GGFMTSEKSQTPLVTLF | 14.306 | 11.380 | 7.079 | 12.604 | 15.361 | 17.564 | 15.219 | 16.096 | 12.874 | 18.482 | 14.545 | 17.065 | 15.599 | 17.307 | 15.428 | 16.387 | 15.174 | 15.649 | 15.418 | 16.284 | 18.131 | 18.452 | 13.549 | 17.712 | 13.116 | 13.891 | 16.853 | 15.980 | 19.540 | 17.574 | 16.910 | 17.085 |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK | 12.119 | 9.999 | 9.298 | 9.110 | 9.002 | 12.351 | 12.184 | 12.397 | 9.936 | 14.050 | 13.008 | 13.267 | 12.326 | 13.314 | 12.780 | 13.106 | 13.330 | 14.549 | 13.598 | 12.537 | 14.061 | 11.722 | 11.865 | 12.810 | 14.693 | 13.108 | 13.919 | 12.525 | 14.288 | 14.010 | 14.159 | 13.871 |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN | 11.816 | 10.406 | 8.732 | 9.384 | 9.812 | 12.409 | 12.172 | 12.093 | 8.572 | 13.872 | 12.320 | 13.030 | 12.102 | 12.911 | 12.746 | 13.334 | 12.589 | 12.795 | 13.296 | 11.504 | 14.419 | 13.499 | 12.418 | 13.688 | 14.368 | 13.161 | 14.096 | 12.549 | 14.669 | 14.545 | 14.595 | 14.427 |
| Y(+42.01)SMEHFRWGKPV(-.98) | 11.328 | 9.850 | 5.870 | 8.962 | 8.065 | 8.364 | 11.484 | 10.413 | 9.783 | 10.022 | 10.028 | 9.943 | 8.971 | 9.310 | 10.661 | 9.218 | 8.165 | 8.977 | 9.847 | 8.965 | 9.688 | 10.078 | 8.718 | 8.254 | 9.702 | 9.048 | 9.537 | 10.537 | 8.559 | 10.677 | 10.672 | 8.969 |
| YGGFMTSEKSQTPLVT | 9.752 | 8.259 | 10.520 | 6.295 | 7.215 | 7.846 | 9.253 | 10.987 | 9.466 | 10.023 | 9.903 | 10.301 | 8.806 | 11.803 | 10.542 | 9.201 | 10.311 | 9.288 | 11.324 | 10.738 | 10.755 | 12.109 | 10.118 | 10.024 | 12.150 | 8.506 | 10.492 | 10.977 | 8.020 | 10.809 | 10.298 | 8.942 |
| YGGFMTSEKSQTPLVTL | 11.115 | 9.926 | 12.941 | 8.730 | 10.289 | 10.053 | 10.896 | 11.538 | 11.169 | 11.487 | 11.244 | 13.083 | 10.977 | 12.802 | 12.849 | 10.704 | 9.379 | 9.583 | 11.891 | 9.832 | 11.467 | 11.154 | 9.430 | 10.350 | 10.831 | 8.978 | 8.992 | 9.187 | 10.664 | 12.055 | 12.028 | 10.474 |
| YGGFMTSEKSQTPLVTLF | 10.188 | 10.345 | 8.951 | 9.781 | 9.700 | 11.127 | 11.471 | 10.541 | 9.944 | 14.253 | 10.756 | 12.951 | 10.673 | 13.130 | 11.061 | 12.027 | 10.636 | 11.989 | 12.029 | 10.646 | 13.445 | 13.754 | 11.552 | 14.286 | 12.437 | 13.151 | 13.414 | 12.842 | 13.263 | 13.783 | 13.976 | 12.559 |
| YGGFMTSEKSQTPLVTLFKNAIIKN | 9.647 | 9.963 | 9.572 | 9.964 | 9.987 | 9.241 | 8.865 | 10.664 | 9.605 | 12.570 | 10.535 | 10.750 | 9.402 | 11.202 | 10.054 | 10.314 | 10.022 | 12.062 | 11.664 | 10.470 | 11.486 | 9.566 | 10.467 | 11.870 | 13.664 | 9.652 | 11.233 | 8.098 | 9.244 | 12.932 | 12.992 | 10.439 |
| LPGLLLF | 11.354 | 11.966 | 8.651 | 10.560 | 13.421 | 9.013 | 8.542 | 13.223 | 13.527 | 9.837 | 9.642 | 8.638 | 12.582 | 11.219 | 9.074 | 10.278 | 9.776 | 10.136 | 8.593 | 13.674 | 13.850 | 11.374 | 12.349 | 11.487 | 9.293 | 10.478 | 12.207 | 10.991 | 11.735 | 11.154 | 11.129 | 10.963 |
| LPHLPGLLLF | 11.350 | 11.674 | 9.673 | 10.108 | 11.476 | 8.233 | 9.808 | 11.837 | 11.906 | 11.150 | 9.415 | 7.996 | 11.840 | 8.133 | 10.239 | 10.929 | 9.996 | 9.510 | 10.299 | 14.005 | 13.652 | 12.268 | 13.087 | 13.265 | 10.304 | 12.461 | 13.209 | 8.551 | 12.532 | 12.864 | 10.708 | 11.861 |
| TPLPELFDRVVML | 6.924 | 6.311 | 11.735 | 14.740 | 10.805 | 6.311 | 8.736 | 12.102 | 15.562 | 7.103 | 6.973 | 7.992 | 13.856 | 9.635 | 10.066 | 7.463 | 11.128 | 10.576 | 8.086 | 13.760 | 11.369 | 12.646 | 10.969 | 11.536 | 14.042 | 13.140 | 10.179 | 11.986 | 11.698 | 12.555 | 13.043 | 10.493 |
| F(+42.01)PAMPLSSLFANAVLRAQHLH | 11.740 | 12.690 | 9.251 | 12.068 | 11.579 | 11.754 | 12.286 | 12.383 | 11.196 | 12.764 | 10.964 | 11.279 | 13.333 | 11.731 | 8.559 | 13.599 | 10.813 | 11.988 | 13.869 | 12.273 | 10.949 | 13.134 | 12.487 | 11.644 | 10.866 | 9.522 | 13.700 | 12.466 | 13.027 | 14.013 | 11.267 | 11.871 |
| FPAM(+15.99)PLSSLFANAVLR | 11.669 | 11.880 | 9.638 | 11.027 | 12.181 | 11.317 | 7.953 | 11.620 | 10.280 | 12.457 | 10.150 | 11.184 | 13.267 | 11.145 | 9.794 | 11.820 | 12.994 | 10.218 | 11.204 | 13.099 | 14.857 | 12.330 | 14.092 | 13.727 | 11.520 | 9.902 | 13.803 | 12.493 | 13.896 | 11.027 | 11.935 | 10.241 |
| FPAM(+15.99)PLSSLFANAVLRAQH | 10.703 | 12.377 | 8.078 | 11.183 | 9.936 | 11.317 | 10.481 | 11.143 | 10.241 | 10.881 | 9.727 | 9.727 | 12.210 | 9.501 | 8.718 | 9.328 | 12.466 | 8.494 | 8.804 | 12.001 | 13.078 | 11.577 | 12.603 | 12.347 | 9.214 | 8.863 | 12.302 | 10.770 | 10.996 | 10.219 | 8.555 | 11.199 |
| FPAM(+15.99)PLSSLFANAVLRAQHLH | 10.542 | 11.962 | 9.327 | 9.357 | 10.833 | 11.005 | 7.708 | 10.156 | 9.801 | 11.050 | 10.442 | 9.872 | 11.799 | 7.601 | 8.567 | 8.229 | 11.770 | 9.595 | 9.971 | 11.124 | 12.064 | 12.212 | 13.244 | 12.811 | 10.729 | 9.894 | 12.581 | 8.736 | 12.034 | 10.967 | 8.768 | 8.452 |
| FPAMPLS | 10.061 | 11.262 | 8.832 | 11.502 | 12.209 | 8.394 | 7.968 | 11.943 | 10.274 | 7.736 | 8.124 | 8.976 | 10.893 | 8.622 | 7.413 | 7.792 | 8.036 | 5.549 | 9.069 | 10.519 | 10.941 | 10.206 | 10.266 | 8.052 | 9.454 | 7.316 | 9.315 | 7.199 | 7.905 | 8.743 | 7.428 | 8.135 |
| FPAMPLSS | 10.235 | 12.140 | 10.519 | 11.262 | 10.945 | 9.423 | 9.068 | 11.330 | 9.870 | 7.734 | 9.673 | 10.774 | 10.423 | 9.736 | 9.156 | 7.653 | 9.175 | 7.140 | 9.617 | 9.888 | 11.825 | 11.253 | 10.759 | 9.267 | 9.179 | 8.655 | 10.590 | 8.531 | 9.498 | 10.212 | 9.206 | 8.582 |
| FPAMPLSSL | 10.330 | 11.869 | 10.902 | 11.360 | 11.853 | 10.468 | 8.635 | 11.918 | 7.977 | 9.574 | 10.090 | 11.156 | 11.049 | 10.014 | 9.197 | 9.217 | 9.667 | 8.037 | 10.080 | 9.875 | 12.195 | 11.381 | 11.119 | 10.017 | 10.350 | 9.787 | 10.916 | 9.196 | 10.098 | 10.377 | 10.040 | 9.392 |
| FPAMPLSSLF | 10.527 | 11.853 | 9.158 | 12.087 | 12.858 | 9.582 | 7.521 | 12.726 | 11.165 | 9.232 | 9.819 | 10.231 | 12.782 | 10.243 | 8.414 | 8.693 | 10.598 | 7.036 | 9.323 | 11.694 | 13.170 | 11.413 | 11.911 | 10.770 | 10.064 | 9.473 | 11.590 | 6.709 | 11.755 | 10.154 | 8.609 | 9.254 |
| FPAMPLSSLFA | 10.845 | 12.896 | 11.528 | 12.424 | 13.869 | 12.005 | 8.380 | 12.912 | 9.972 | 11.643 | 11.849 | 12.569 | 14.011 | 12.769 | 10.733 | 10.060 | 12.963 | 9.656 | 11.121 | 12.606 | 15.981 | 14.042 | 15.078 | 14.512 | 12.654 | 13.310 | 15.692 | 10.548 | 15.965 | 14.216 | 12.698 | 12.561 |
| FPAMPLSSLFAN | 10.945 | 12.594 | 11.281 | 12.367 | 13.617 | 11.866 | 8.898 | 12.985 | 9.901 | 11.306 | 11.287 | 12.318 | 13.534 | 12.865 | 10.653 | 10.129 | 12.957 | 9.739 | 11.557 | 12.551 | 15.711 | 13.988 | 15.032 | 13.887 | 12.343 | 12.564 | 15.193 | 10.310 | 15.001 | 14.000 | 12.389 | 12.424 |
| FPAMPLSSLFANA | 10.850 | 12.441 | 10.916 | 12.091 | 13.214 | 5.405 | 11.710 | 12.827 | 9.558 | 13.011 | 11.323 | 12.599 | 13.823 | 8.724 | 11.223 | 11.020 | 13.059 | 12.072 | 11.976 | 12.787 | 16.294 | 10.698 | 15.763 | 14.938 | 13.485 | 13.738 | 16.055 | 10.399 | 16.307 | 14.795 | 13.407 | 14.124 |
| FPAMPLSSLFANAVLR | 11.005 | 12.752 | 8.591 | 12.422 | 12.225 | 11.305 | 8.388 | 12.563 | 10.398 | 11.361 | 11.466 | 11.824 | 14.351 | 11.294 | 10.003 | 10.283 | 13.079 | 9.913 | 11.862 | 13.192 | 16.158 | 14.934 | 15.967 | 15.410 | 13.229 | 14.017 | 16.661 | 11.289 | 16.826 | 14.909 | 13.544 | 12.804 |
| FPAMPLSSLFANAVLRA | 11.908 | 12.581 | 5.090 | 12.743 | 12.138 | 9.673 | 7.148 | 13.557 | 10.164 | 9.201 | 10.027 | 9.654 | 13.047 | 8.011 | 6.287 | 8.393 | 9.643 | 5.850 | 10.593 | 12.618 | 13.103 | 12.019 | 10.307 | 12.168 | 11.055 | 10.444 | 13.518 | 8.097 | 13.970 | 11.546 | 9.716 | 9.922 |
| FPAMPLSSLFANAVLRAQ | 12.843 | 12.340 | 4.768 | 13.710 | 13.356 | 12.106 | 9.536 | 14.031 | 10.976 | 12.694 | 13.418 | 14.798 | 16.376 | 13.642 | 12.852 | 12.641 | 15.247 | 12.720 | 14.051 | 15.019 | 15.990 | 14.981 | 14.686 | 15.922 | 12.350 | 13.929 | 16.431 | 10.840 | 16.800 | 14.294 | 13.297 | 11.588 |
| FPAMPLSSLFANAVLRAQH | 10.619 | 12.564 | 6.586 | 11.943 | 10.615 | 10.342 | 7.939 | 11.424 | 7.012 | 10.035 | 10.549 | 9.980 | 12.257 | 8.792 | 8.432 | 8.918 | 11.731 | 9.266 | 10.862 | 11.691 | 13.343 | 13.226 | 13.795 | 12.721 | 11.305 | 12.035 | 13.901 | 9.320 | 13.667 | 13.089 | 11.662 | 10.541 |
| FPAMPLSSLFANAVLRAQHLH | 10.712 | 12.641 | 6.298 | 11.742 | 8.044 | 10.697 | 8.296 | 11.120 | 8.196 | 10.009 | 11.041 | 10.308 | 11.919 | 7.008 | 8.863 | 9.482 | 12.303 | 9.880 | 10.864 | 11.735 | 12.285 | 13.640 | 13.684 | 12.890 | 11.538 | 11.822 | 13.897 | 9.568 | 13.803 | 12.976 | 11.714 | 10.410 |
| FPAMPLSSLFANAVLRAQHLHQ | 10.854 | 12.712 | 6.318 | 11.759 | 8.608 | 10.771 | 8.981 | 11.483 | 9.479 | 10.560 | 11.097 | 10.582 | 12.484 | 8.296 | 9.395 | 10.172 | 12.170 | 10.272 | 11.281 | 11.631 | 12.705 | 13.795 | 14.350 | 13.411 | 12.269 | 12.111 | 14.281 | 10.078 | 13.939 | 13.369 | 12.123 | 10.732 |
| FPAMPLSSLFANAVLRAQHLHQL | 11.597 | 13.265 | 5.796 | 12.620 | 7.268 | 11.602 | 9.114 | 12.463 | 10.104 | 11.527 | 12.210 | 11.588 | 12.930 | 5.650 | 8.734 | 11.103 | 13.313 | 10.745 | 12.318 | 13.545 | 12.578 | 14.769 | 13.717 | 14.167 | 12.296 | 12.977 | 15.366 | 10.948 | 15.944 | 14.332 | 13.086 | 12.543 |
| FPAMPLSSLFANAVLRAQHLHQLA | 11.927 | 13.516 | 5.694 | 12.845 | 8.046 | 11.646 | 8.887 | 12.510 | 10.492 | 11.599 | 12.504 | 11.664 | 13.247 | 6.562 | 8.564 | 11.024 | 13.234 | 10.783 | 12.156 | 13.562 | 12.875 | 14.938 | 14.109 | 14.518 | 12.957 | 13.081 | 15.458 | 11.108 | 15.706 | 14.505 | 13.248 | 12.505 |
| FPAMPLSSLFANAVLRAQHLHQLAAD | 11.911 | 12.857 | 4.739 | 13.730 | 9.107 | 10.822 | 8.894 | 13.686 | 11.009 | 10.753 | 11.041 | 10.679 | 13.845 | 6.497 | 7.297 | 10.791 | 12.550 | 8.838 | 12.217 | 14.051 | 13.183 | 14.759 | 14.083 | 14.529 | 12.948 | 12.036 | 15.161 | 11.292 | 15.313 | 13.950 | 12.383 | 11.674 |
| GPVQFLSRIF | 10.311 | 10.698 | 10.897 | 12.176 | 11.453 | 8.397 | 8.975 | 12.488 | 13.531 | 8.895 | 7.316 | 9.173 | 11.664 | 9.538 | 10.066 | 6.288 | 8.212 | 8.973 | 7.946 | 13.002 | 10.244 | 10.139 | 10.881 | 9.132 | 9.906 | 10.011 | 7.949 | 9.063 | 8.874 | 9.031 | 9.424 | 7.647 |
| PVQFLSRIF | 9.651 | 9.640 | 10.540 | 11.423 | 11.950 | 7.729 | 8.564 | 12.740 | 13.253 | 6.572 | 6.354 | 8.444 | 11.400 | 8.638 | 9.796 | 8.071 | 7.899 | 8.594 | 7.225 | 12.326 | 9.685 | 9.655 | 9.910 | 6.982 | 9.147 | 9.303 | 8.047 | 5.563 | 6.243 | 8.610 | 9.161 | 9.284 |
| SPRIGQILK | 10.381 | 10.583 | 10.219 | 11.832 | 12.393 | 8.355 | 5.807 | 12.058 | 10.693 | 5.631 | 5.501 | 8.651 | 11.322 | 9.180 | 9.845 | 8.330 | 8.824 | 8.279 | 8.181 | 10.194 | 10.052 | 9.101 | 9.775 | 7.727 | 9.046 | 6.512 | 7.938 | 5.616 | 6.113 | 6.458 | 3.561 | 8.743 |
| SPRIGQILKQ | 9.662 | 9.026 | 3.814 | 11.652 | 12.092 | 4.292 | 4.999 | 12.222 | 12.127 | 5.547 | 4.539 | 7.119 | 10.782 | 3.477 | 3.703 | 5.814 | 6.672 | 7.293 | 6.620 | 10.850 | 8.510 | 8.225 | 8.548 | 5.522 | 8.517 | 5.013 | 5.390 | 3.484 | 4.256 | 4.758 | 8.308 | 5.970 |
| TDMELLRF | 8.346 | 7.354 | 10.532 | 11.011 | 11.818 | 5.608 | 6.980 | 11.578 | 12.570 | 5.637 | 9.529 | 7.057 | 10.270 | 9.470 | 10.007 | 6.694 | 8.081 | 8.218 | 7.139 | 9.701 | 7.917 | 6.927 | 7.330 | 3.897 | 8.230 | 9.825 | 5.256 | 3.411 | 8.760 | 7.214 | 3.214 | 4.888 |
| ASLDKFLASVSTVLTSKYR | 10.803 | 13.570 | 9.190 | 11.064 | 11.272 | 10.884 | 11.654 | 10.865 | 10.053 | 11.538 | 12.321 | 11.257 | 10.381 | 11.776 | 10.822 | 11.845 | 13.271 | 10.688 | 9.585 | 12.094 | 12.806 | 14.604 | 12.364 | 11.972 | 13.153 | 14.021 | 13.113 | 8.600 | 13.905 | 11.337 | 12.884 | 7.699 |
| FLASVSTVLTSKYR | 9.835 | 12.836 | 10.246 | 10.927 | 9.121 | 9.647 | 11.321 | 11.179 | 10.031 | 10.816 | 11.782 | 11.146 | 9.549 | 10.304 | 8.098 | 10.315 | 11.541 | 8.249 | 8.091 | 9.715 | 12.048 | 12.545 | 10.724 | 9.279 | 10.881 | 10.228 | 10.397 | 10.162 | 10.362 | 9.713 | 11.723 | 8.299 |
| SLDKFLA | 8.873 | 8.211 | 5.790 | 11.165 | 11.860 | 4.696 | 3.040 | 11.627 | 11.971 | 4.011 | 2.264 | 4.153 | 10.042 | 4.999 | 4.997 | 5.377 | 6.716 | 7.531 | 6.214 | 11.661 | 8.261 | 7.470 | 6.895 | 2.877 | 9.516 | 4.630 | 2.479 | 2.254 | 3.255 | 7.285 | 4.610 | 5.107 |
| SLDKFLASVSTVLTSKYR | 10.477 | 12.848 | 3.790 | 11.117 | 6.627 | 10.691 | 10.985 | 10.445 | 9.516 | 5.968 | 12.165 | 9.680 | 11.280 | 4.927 | 10.540 | 7.028 | 13.398 | 9.071 | 9.525 | 12.053 | 14.183 | 14.758 | 13.236 | 11.788 | 12.612 | 12.587 | 13.005 | 9.528 | 13.374 | 11.633 | 12.539 | 9.585 |
| SVSTVLTSKYR | 9.666 | 11.802 | 8.671 | 10.572 | 9.660 | 8.381 | 6.261 | 10.461 | 9.883 | 4.578 | 10.602 | 9.752 | 11.499 | 9.943 | 6.554 | 5.865 | 11.220 | 6.018 | 8.967 | 9.886 | 12.635 | 11.719 | 10.988 | 8.797 | 9.316 | 9.400 | 8.996 | 7.682 | 8.621 | 8.606 | 8.880 | 9.299 |
| TPAMHASLDKFLASVSTVLTSKYR | 10.295 | 12.688 | 8.875 | 8.142 | 10.848 | 11.034 | 11.298 | 11.833 | 9.219 | 8.140 | 12.946 | 9.891 | 10.554 | 12.381 | 11.369 | 12.188 | 14.259 | 9.988 | 9.690 | 8.292 | 12.028 | 14.339 | 12.832 | 11.432 | 12.048 | 12.947 | 12.348 | 7.149 | 13.453 | 10.130 | 11.784 | 9.500 |
| VHLTDAEKAAVN | 10.394 | 11.137 | 10.337 | 10.621 | 10.789 | 8.866 | 7.588 | 11.347 | 10.210 | 6.265 | 10.827 | 10.792 | 10.503 | 10.087 | 7.531 | 7.136 | 11.095 | 7.686 | 9.833 | 10.715 | 11.728 | 10.810 | 10.708 | 8.892 | 9.651 | 10.101 | 8.964 | 8.501 | 8.673 | 9.594 | 8.694 | 8.147 |
| VHLTDAEKAAVNG | 10.416 | 10.495 | 9.605 | 10.644 | 10.446 | 7.566 | 7.495 | 11.380 | 9.742 | 9.155 | 10.122 | 9.883 | 9.024 | 8.845 | 7.021 | 6.732 | 10.686 | 7.159 | 9.367 | 9.781 | 10.974 | 10.986 | 9.962 | 8.623 | 9.117 | 9.563 | 8.224 | 7.863 | 7.999 | 8.839 | 7.924 | 7.458 |
| AAFQKVVAGVASALAHKYH | 10.394 | 12.364 | 9.894 | 10.762 | 10.876 | 8.577 | 4.668 | 10.908 | 9.968 | 9.139 | 10.225 | 7.560 | 10.758 | 9.781 | 9.882 | 5.773 | 10.847 | 6.448 | 8.650 | 10.555 | 10.150 | 11.780 | 10.847 | 8.599 | 10.314 | 10.482 | 10.010 | 8.542 | 9.696 | 9.882 | 10.541 | 8.116 |
| AFQKVVAGVASALAHKYH | 10.066 | 12.232 | 10.032 | 8.200 | 8.221 | 8.581 | 9.790 | 10.742 | 10.008 | 9.356 | 10.260 | 8.351 | 10.856 | 3.873 | 9.892 | 9.440 | 10.915 | 7.017 | 8.356 | 9.662 | 10.216 | 11.415 | 10.690 | 8.649 | 9.925 | 10.107 | 9.327 | 7.672 | 9.054 | 8.967 | 9.472 | 6.201 |
| AQAAFQKVVAGVASALAHKYH | 10.446 | 10.416 | 9.723 | 10.129 | 9.844 | 8.910 | 9.405 | 9.264 | 9.772 | 5.567 | 9.657 | 8.090 | 10.643 | 9.825 | 10.074 | 9.444 | 10.828 | 9.347 | 6.452 | 8.578 | 9.594 | 11.351 | 10.297 | 8.333 | 9.967 | 10.036 | 8.795 | 8.098 | 8.662 | 8.960 | 9.476 | 5.361 |
| ASALAHKYH | 9.119 | 9.944 | 8.964 | 10.843 | 10.219 | 7.671 | 9.480 | 10.687 | 10.143 | 9.294 | 9.928 | 9.237 | 11.341 | 8.561 | 9.901 | 7.158 | 10.751 | 5.107 | 8.456 | 9.488 | 10.654 | 10.314 | 10.245 | 8.427 | 8.616 | 9.564 | 9.432 | 8.989 | 8.008 | 8.574 | 7.767 | 7.209 |
| GVASALAHKYH | 10.031 | 10.900 | 9.289 | 10.748 | 10.213 | 8.045 | 6.849 | 10.901 | 5.952 | 6.069 | 10.225 | 8.697 | 11.316 | 8.949 | 7.232 | 6.957 | 10.854 | 7.057 | 8.800 | 10.265 | 11.133 | 10.572 | 10.568 | 8.836 | 9.232 | 10.163 | 8.541 | 8.036 | 8.524 | 8.875 | 8.246 | 6.987 |
| QAAFQKVVAGVASALAHKYH | 10.556 | 12.521 | 10.214 | 10.904 | 8.892 | 9.318 | 10.127 | 10.825 | 9.992 | 9.293 | 10.207 | 8.352 | 11.156 | 6.516 | 9.901 | 6.466 | 11.334 | 7.271 | 7.370 | 9.575 | 9.924 | 11.232 | 10.550 | 8.927 | 9.833 | 10.029 | 9.054 | 6.496 | 9.025 | 9.024 | 9.289 | 6.866 |
| VHLTDAEKA | 9.596 | 11.515 | 8.686 | 9.556 | 10.374 | 4.663 | 8.896 | 9.381 | 9.767 | 5.554 | 9.459 | 9.478 | 7.547 | 10.284 | 6.829 | 6.979 | 7.277 | 8.626 | 8.131 | 7.772 | 12.071 | 8.907 | 9.338 | 7.575 | 6.512 | 9.767 | 8.716 | 7.092 | 8.865 | 8.226 | 7.202 | 7.238 |
| GPNLVARSKEALA | 10.160 | 11.332 | 9.982 | 11.797 | 9.708 | 7.839 | 7.484 | 11.473 | 9.970 | 6.078 | 10.017 | 8.141 | 10.588 | 8.107 | 7.009 | 6.020 | 11.061 | 5.863 | 9.880 | 9.482 | 11.076 | 11.467 | 10.386 | 8.915 | 10.281 | 9.922 | 8.801 | 8.046 | 8.839 | 8.446 | 9.188 | 7.438 |
| AKVAVLGA | 11.607 | 10.986 | 8.726 | 12.692 | 13.137 | 7.628 | 8.232 | 12.564 | 9.903 | 7.450 | 9.232 | 9.571 | 11.762 | 8.902 | 6.475 | 8.634 | 10.449 | 9.200 | 8.686 | 10.524 | 9.752 | 10.534 | 10.379 | 8.990 | 8.761 | 8.021 | 7.566 | 9.328 | 7.901 | 7.420 | 5.739 | 8.199 |
| SNRVVDLMAYMASKE | 10.341 | 11.474 | 9.935 | 12.820 | 9.606 | 9.124 | 4.947 | 11.371 | 9.639 | 6.940 | 10.470 | 9.201 | 10.992 | 9.948 | 9.965 | 8.175 | 11.083 | 9.715 | 10.030 | 9.763 | 12.192 | 11.915 | 11.170 | 9.152 | 10.002 | 7.936 | 9.852 | 8.546 | 9.112 | 9.762 | 8.423 | 9.778 |
| VKVGVNGF | 9.858 | 10.312 | 10.597 | 11.797 | 10.653 | 8.886 | 7.467 | 11.390 | 9.681 | 7.958 | 9.825 | 10.534 | 9.650 | 9.521 | 8.472 | 8.328 | 10.045 | 9.705 | 9.176 | 9.426 | 10.590 | 10.940 | 10.157 | 8.631 | 10.688 | 8.214 | 8.519 | 7.820 | 8.371 | 9.827 | 7.309 | 10.055 |
| VKVGVNGFGRIG | 10.259 | 11.444 | 9.153 | 11.233 | 9.528 | 7.284 | 6.627 | 11.020 | 9.797 | 9.168 | 9.972 | 8.918 | 9.916 | 8.940 | 9.872 | 7.063 | 9.717 | 9.248 | 9.290 | 9.677 | 10.998 | 10.957 | 10.202 | 8.810 | 10.133 | 7.988 | 9.089 | 8.345 | 7.685 | 9.998 | 8.248 | 8.982 |
| PHFLYPK | 10.887 | 9.560 | 7.192 | 9.534 | 7.826 | 8.406 | 10.927 | 10.444 | 8.159 | 8.792 | 10.377 | 10.117 | 9.154 | 9.448 | 10.444 | 9.313 | 9.612 | 8.151 | 10.741 | 8.297 | 9.914 | 10.750 | 8.916 | 8.812 | 10.387 | 9.795 | 8.701 | 10.214 | 8.324 | 10.360 | 10.318 | 8.948 |
| SQENPNTYSEDLDV | 11.562 | 10.471 | 10.138 | 10.754 | 11.703 | 11.372 | 11.259 | 10.753 | 9.867 | 11.515 | 12.345 | 14.155 | 11.367 | 13.802 | 13.262 | 11.779 | 10.515 | 10.792 | 12.373 | 9.145 | 12.094 | 11.537 | 9.343 | 12.225 | 12.549 | 10.131 | 12.420 | 12.097 | 10.913 | 12.609 | 11.263 | 12.160 |
| YGGFLRKYP | 10.167 | 10.588 | 6.567 | 8.598 | 8.765 | 8.635 | 10.948 | 9.402 | 9.760 | 9.284 | 10.205 | 10.778 | 7.781 | 9.921 | 10.896 | 8.962 | 9.019 | 8.499 | 11.269 | 8.280 | 9.726 | 10.320 | 9.220 | 8.778 | 9.282 | 9.027 | 9.104 | 10.035 | 8.603 | 10.656 | 10.203 | 8.842 |
| YGGFLRKYPK | 10.320 | 10.011 | 10.231 | 8.746 | 8.768 | 7.388 | 11.195 | 9.934 | 9.897 | 7.884 | 9.651 | 9.133 | 9.265 | 9.126 | 10.852 | 8.435 | 9.875 | 8.190 | 11.013 | 7.401 | 9.652 | 10.049 | 9.616 | 9.297 | 7.874 | 9.302 | 8.964 | 9.931 | 8.163 | 10.442 | 9.577 | 7.745 |
| YGGFLRRI | 10.249 | 10.475 | 9.895 | 8.716 | 8.412 | 8.461 | 10.719 | 9.462 | 7.680 | 9.762 | 9.857 | 10.203 | 8.713 | 8.691 | 10.343 | 9.240 | 9.106 | 9.044 | 10.963 | 8.552 | 9.292 | 10.235 | 9.387 | 9.152 | 9.001 | 9.280 | 9.267 | 10.019 | 8.854 | 10.597 | 10.705 | 9.704 |
| YGGFLRRQFKVVT | 10.678 | 11.310 | 10.360 | 7.221 | 9.896 | 8.892 | 10.891 | 9.567 | 9.715 | 9.284 | 9.646 | 9.784 | 8.348 | 7.482 | 10.235 | 9.080 | 9.195 | 8.882 | 10.986 | 8.828 | 9.502 | 11.004 | 9.388 | 9.227 | 9.846 | 9.231 | 9.365 | 10.322 | 8.981 | 10.683 | 10.489 | 8.962 |
| MDQLAKELT | 10.628 | 9.657 | 10.143 | 10.403 | 10.333 | 6.309 | 10.288 | 11.126 | 10.186 | 9.145 | 8.709 | 9.679 | 9.416 | 10.989 | 11.568 | 9.912 | 8.105 | 8.914 | 9.530 | 9.795 | 10.583 | 9.938 | 9.766 | 9.266 | 8.203 | 7.812 | 8.728 | 8.927 | 7.637 | 10.740 | 8.245 | 8.811 |
| MDQLAKELTAE | 9.895 | 10.421 | 10.732 | 10.121 | 10.116 | 9.038 | 10.897 | 10.398 | 10.151 | 9.861 | 9.517 | 10.177 | 8.459 | 11.120 | 11.450 | 10.173 | 10.193 | 8.850 | 12.352 | 9.959 | 10.679 | 9.984 | 9.672 | 8.196 | 9.760 | 9.647 | 9.201 | 8.979 | 8.309 | 11.251 | 10.163 | 10.477 |
| WSRMDQLAKELT | 9.783 | 10.084 | 9.601 | 9.909 | 10.664 | 7.377 | 11.386 | 10.210 | 9.953 | 10.344 | 8.585 | 9.725 | 9.677 | 11.174 | 11.968 | 10.230 | 9.304 | 10.037 | 8.845 | 9.212 | 10.527 | 9.655 | 10.056 | 9.803 | 9.554 | 8.571 | 9.431 | 8.422 | 8.928 | 11.088 | 9.571 | 8.507 |
| WSRMDQLAKELTAE | 10.757 | 10.127 | 10.842 | 10.162 | 10.187 | 9.259 | 12.246 | 10.407 | 10.285 | 11.268 | 10.018 | 10.121 | 10.356 | 11.676 | 12.629 | 10.920 | 7.835 | 10.727 | 10.866 | 9.912 | 11.295 | 10.206 | 10.461 | 10.432 | 10.558 | 10.498 | 10.355 | 10.142 | 9.885 | 12.033 | 11.731 | 9.836 |
| NQEQAEQGREHL | 10.509 | 9.968 | 10.348 | 9.969 | 11.162 | 6.400 | 11.435 | 8.906 | 10.164 | 9.663 | 9.639 | 9.390 | 8.892 | 12.723 | 12.422 | 11.081 | 8.275 | 9.873 | 8.982 | 8.438 | 11.899 | 7.306 | 10.489 | 11.064 | 8.954 | 8.841 | 9.234 | 8.298 | 7.312 | 9.823 | 7.557 | 8.971 |
| Q(-17.03)ELGKLTGPSNQ | 10.600 | 10.687 | 10.599 | 10.021 | 10.333 | 7.625 | 10.669 | 10.094 | 9.959 | 10.112 | 8.377 | 10.031 | 9.367 | 10.835 | 11.831 | 9.752 | 9.144 | 9.236 | 9.690 | 9.764 | 10.901 | 10.082 | 8.873 | 9.529 | 9.431 | 9.032 | 10.207 | 9.266 | 8.416 | 10.412 | 9.427 | 8.980 |
| YEENSRENPF | 10.597 | 9.419 | 11.915 | 8.425 | 10.060 | 7.296 | 11.749 | 10.553 | 10.409 | 10.527 | 10.485 | 11.741 | 6.892 | 11.191 | 11.777 | 9.625 | 8.007 | 9.991 | 10.706 | 7.753 | 10.628 | 9.762 | 8.907 | 9.217 | 9.494 | 8.475 | 9.246 | 9.765 | 8.283 | 11.446 | 10.174 | 10.361 |
| YKVNEYQGPVAPSGGFFLFRPRN(-.98) | 10.448 | 10.798 | 9.008 | 10.030 | 10.023 | 7.506 | 11.113 | 9.955 | 9.639 | 9.969 | 8.523 | 8.511 | 8.006 | 9.375 | 10.358 | 10.896 | 6.697 | 11.058 | 9.910 | 9.880 | 9.117 | 10.073 | 10.800 | 10.213 | 10.229 | 9.742 | 10.436 | 9.457 | 10.095 | 11.401 | 10.105 | 9.384 |
| Q(-17.03)EPGAPAAGM | 10.403 | 10.100 | 11.240 | 9.350 | 9.764 | 8.577 | 11.059 | 9.924 | 3.460 | 10.337 | 10.163 | 11.565 | 7.893 | 11.507 | 11.905 | 9.812 | 8.264 | 9.927 | 11.302 | 9.201 | 10.588 | 10.452 | 9.624 | 9.571 | 10.975 | 9.330 | 9.553 | 10.610 | 9.551 | 11.327 | 10.039 | 10.419 |
| Q(-17.03)EPGAPAAGM(+15.99) | 10.808 | 10.066 | 11.654 | 9.885 | 9.652 | 9.232 | 10.830 | 8.040 | 10.060 | 11.604 | 9.641 | 10.954 | 9.890 | 11.070 | 11.497 | 10.693 | 10.098 | 9.625 | 10.460 | 9.236 | 9.899 | 10.545 | 9.690 | 10.312 | 9.751 | 7.921 | 8.816 | 10.312 | 9.192 | 10.901 | 9.573 | 9.161 |
| A(+42.01)AYKLVLIRH | 10.143 | 11.451 | 10.253 | 11.425 | 9.293 | 8.917 | 9.200 | 11.494 | 10.322 | 9.020 | 9.180 | 8.439 | 9.905 | 7.848 | 9.798 | 7.392 | 9.723 | 8.495 | 8.343 | 9.186 | 10.637 | 10.140 | 9.884 | 7.372 | 8.940 | 9.401 | 9.332 | 8.007 | 8.226 | 8.901 | 7.671 | 7.634 |
| A(+42.01)AYKLVLIRHGE | 9.911 | 10.740 | 7.965 | 11.840 | 9.575 | 6.654 | 8.786 | 11.156 | 10.051 | 6.046 | 8.528 | 7.707 | 10.994 | 6.684 | 9.770 | 7.595 | 9.489 | 8.475 | 7.723 | 11.106 | 10.683 | 10.104 | 10.661 | 8.468 | 9.272 | 6.566 | 8.752 | 6.297 | 6.383 | 7.963 | 9.067 | 7.378 |
| SVNPYLQ(-.98) | 9.750 | 10.146 | 11.454 | 8.469 | 10.185 | 8.628 | 10.829 | 11.273 | 10.259 | 9.085 | 10.098 | 11.430 | 8.519 | 10.592 | 10.720 | 9.072 | 8.962 | 9.706 | 11.361 | 9.304 | 9.820 | 9.328 | 9.266 | 8.528 | 9.851 | 8.652 | 8.739 | 9.716 | 8.271 | 9.942 | 7.903 | 10.083 |
| SVNPYLQGKRLDNVV | 10.151 | 10.785 | 11.240 | 9.939 | 9.495 | 8.790 | 11.215 | 9.023 | 9.995 | 10.163 | 9.530 | 10.193 | 8.829 | 11.140 | 11.987 | 9.693 | 8.452 | 9.390 | 9.861 | 9.283 | 11.167 | 10.149 | 10.253 | 10.268 | 8.192 | 9.228 | 9.869 | 9.109 | 9.017 | 11.730 | 10.456 | 10.223 |
| SVNPYLQGKRLDNVVA | 10.510 | 10.234 | 11.750 | 9.915 | 9.583 | 8.887 | 11.276 | 10.275 | 10.231 | 9.789 | 9.613 | 10.646 | 8.807 | 11.118 | 11.870 | 9.726 | 8.917 | 9.529 | 10.700 | 8.760 | 10.798 | 10.266 | 9.358 | 9.409 | 9.682 | 9.590 | 9.216 | 9.645 | 8.433 | 10.593 | 10.428 | 9.534 |
| SVPHFSEEEKEPE | 10.663 | 8.956 | 12.011 | 9.772 | 9.232 | 8.368 | 11.277 | 8.841 | 10.319 | 9.279 | 10.264 | 11.647 | 9.801 | 11.603 | 11.562 | 9.475 | 9.977 | 10.107 | 10.673 | 9.904 | 10.310 | 8.822 | 8.989 | 9.076 | 8.993 | 9.145 | 9.251 | 10.203 | 8.475 | 10.713 | 9.535 | 10.146 |
| VPHFSEEEKEPE | 9.121 | 9.672 | 13.090 | 9.367 | 9.849 | 8.983 | 11.339 | 9.645 | 10.737 | 9.477 | 10.695 | 10.465 | 7.831 | 11.068 | 10.884 | 9.034 | 10.674 | 9.903 | 10.961 | 9.948 | 8.645 | 10.291 | 9.425 | 9.050 | 9.794 | 8.650 | 8.933 | 9.218 | 8.239 | 10.739 | 9.199 | 10.330 |
| IKMALQQEGFD | 10.789 | 10.427 | 8.543 | 13.322 | 5.556 | 9.027 | 10.007 | 11.332 | 9.203 | 9.248 | 9.801 | 9.804 | 8.375 | 9.936 | 9.842 | 9.378 | 9.432 | 7.621 | 10.169 | 9.758 | 9.410 | 10.131 | 8.035 | 8.217 | 9.980 | 9.443 | 8.636 | 9.624 | 9.499 | 10.278 | 9.630 | 9.886 |
| PMFIVNTNVPRA | 10.274 | 11.082 | 8.870 | 12.774 | 10.571 | 8.447 | 4.750 | 12.272 | 9.877 | 6.804 | 9.832 | 9.311 | 11.303 | 7.521 | 10.064 | 9.817 | 11.068 | 9.989 | 7.998 | 12.215 | 10.786 | 11.282 | 7.559 | 9.449 | 9.957 | 9.796 | 9.219 | 9.560 | 8.321 | 7.914 | 9.835 | 7.879 |
| TAYAIYMLAMAAFPKKQN | 10.599 | 10.626 | 9.354 | 12.190 | 11.120 | 8.582 | 7.456 | 12.012 | 10.662 | 9.846 | 9.504 | 10.113 | 12.127 | 9.653 | 6.007 | 9.802 | 10.813 | 6.611 | 10.089 | 12.241 | 11.986 | 12.244 | 11.922 | 10.634 | 11.937 | 9.283 | 11.051 | 10.709 | 10.518 | 9.045 | 11.169 | 9.909 |
| SAVISLEGKPL | 10.203 | 10.885 | 9.304 | 11.471 | 11.325 | 8.433 | 9.589 | 11.991 | 7.377 | 9.463 | 9.185 | 8.786 | 10.459 | 8.606 | 9.904 | 9.098 | 9.723 | 9.102 | 8.626 | 9.716 | 10.842 | 10.405 | 9.709 | 8.539 | 9.942 | 9.292 | 9.496 | 7.318 | 7.804 | 8.290 | 9.558 | 8.739 |
| FPKPEGSQD | 10.280 | 9.209 | 12.145 | 9.022 | 11.057 | 8.472 | 11.102 | 10.370 | 10.588 | 9.755 | 9.729 | 9.512 | 9.859 | 11.349 | 11.175 | 10.544 | 10.463 | 7.084 | 9.644 | 9.670 | 10.081 | 9.605 | 9.586 | 8.954 | 7.122 | 9.367 | 9.064 | 8.307 | 8.245 | 10.201 | 8.537 | 9.034 |
| FPKPEGSQDKSLHN | 9.928 | 8.767 | 12.221 | 8.589 | 9.474 | 8.277 | 10.965 | 9.015 | 4.072 | 8.948 | 10.151 | 9.287 | 9.650 | 11.244 | 11.550 | 10.438 | 10.472 | 9.854 | 10.167 | 7.365 | 10.483 | 9.590 | 10.146 | 9.677 | 8.329 | 10.144 | 9.283 | 9.645 | 8.466 | 10.309 | 9.080 | 9.134 |
| SLKPEFVDIINAKQ | 10.358 | 12.115 | 9.441 | 12.732 | 10.662 | 7.676 | 9.623 | 13.523 | 9.983 | 9.834 | 9.196 | 8.761 | 10.997 | 9.289 | 9.881 | 7.770 | 11.056 | 9.447 | 8.724 | 9.336 | 11.278 | 11.443 | 11.478 | 9.514 | 10.690 | 7.991 | 9.084 | 7.982 | 9.819 | 9.107 | 6.201 | 8.461 |
| GRTLYGFGG | 10.186 | 11.137 | 10.580 | 11.080 | 10.347 | 8.523 | 9.857 | 11.533 | 10.145 | 7.582 | 10.233 | 9.598 | 9.706 | 9.275 | 8.453 | 8.143 | 9.733 | 6.303 | 9.084 | 9.064 | 10.774 | 10.761 | 9.623 | 8.684 | 9.770 | 8.530 | 9.054 | 7.970 | 8.564 | 9.066 | 8.650 | 8.290 |
| RTLYGFGG | 10.217 | 10.628 | 10.486 | 11.707 | 11.150 | 8.148 | 7.782 | 11.774 | 9.745 | 8.272 | 10.282 | 9.161 | 10.011 | 9.106 | 8.112 | 6.964 | 10.018 | 5.883 | 8.387 | 9.071 | 10.823 | 10.764 | 9.738 | 8.991 | 10.145 | 8.406 | 8.334 | 7.476 | 8.722 | 8.870 | 8.629 | 8.982 |
| TLYGFGG | 8.636 | 9.544 | 7.889 | 11.685 | 11.089 | 7.536 | 7.534 | 11.600 | 11.639 | 8.104 | 8.758 | 7.710 | 9.894 | 7.371 | 7.137 | 7.233 | 8.862 | 7.727 | 8.750 | 10.784 | 10.135 | 9.792 | 8.794 | 7.594 | 9.998 | 7.661 | 7.727 | 7.220 | 7.939 | 7.870 | 7.232 | 8.614 |
| MQIFVKTL | 10.461 | 11.838 | 9.976 | 12.006 | 9.544 | 8.996 | 8.889 | 12.341 | 10.253 | 8.783 | 10.087 | 9.403 | 9.407 | 8.677 | 8.130 | 8.381 | 8.912 | 6.556 | 9.376 | 9.296 | 10.749 | 10.710 | 9.178 | 8.463 | 9.068 | 7.541 | 8.949 | 7.675 | 8.805 | 8.634 | 7.815 | 9.000 |
| LLRALASSNARAQQ | 10.797 | 9.564 | 7.445 | 9.842 | 9.716 | 8.833 | 11.020 | 9.838 | 9.856 | 8.560 | 10.014 | 11.081 | 9.422 | 11.064 | 11.444 | 9.690 | 9.539 | 8.757 | 10.671 | 9.833 | 9.985 | 9.942 | 9.165 | 9.474 | 9.785 | 10.068 | 8.711 | 9.812 | 8.463 | 10.821 | 10.076 | 9.105 |
| AVDQDLGPEVPPENVL(-.98) | 10.427 | 10.691 | 11.074 | 10.402 | 11.450 | 9.744 | 11.274 | 11.280 | 10.133 | 11.831 | 10.139 | 11.389 | 9.955 | 12.501 | 12.462 | 11.463 | 8.782 | 9.958 | 10.934 | 10.062 | 11.925 | 10.619 | 9.699 | 11.113 | 10.573 | 9.765 | 11.276 | 10.405 | 10.541 | 11.840 | 10.719 | 11.111 |
| LENSSPQAPA | 9.484 | 9.622 | 10.337 | 8.139 | 10.572 | 8.651 | 10.747 | 9.424 | 10.196 | 9.229 | 9.089 | 10.700 | 9.540 | 11.326 | 12.009 | 10.051 | 9.970 | 9.338 | 10.595 | 9.982 | 10.472 | 9.999 | 9.718 | 9.803 | 7.694 | 9.608 | 9.037 | 9.373 | 8.166 | 9.882 | 8.224 | 9.417 |
| LENSSPQAPARRLLPP | 10.225 | 10.416 | 11.125 | 6.534 | 9.571 | 7.823 | 11.239 | 9.458 | 10.135 | 9.672 | 9.594 | 10.469 | 6.857 | 11.048 | 12.116 | 9.613 | 8.800 | 9.312 | 10.241 | 9.862 | 10.217 | 9.704 | 9.671 | 9.670 | 9.207 | 9.428 | 9.202 | 9.491 | 7.863 | 10.996 | 10.170 | 9.450 |
| SLSAASAPLAETSTPL | 10.245 | 10.052 | 11.468 | 9.513 | 10.920 | 9.905 | 11.162 | 10.497 | 10.245 | 10.384 | 9.978 | 11.651 | 9.392 | 11.812 | 12.455 | 10.689 | 9.348 | 10.359 | 10.601 | 10.027 | 10.666 | 9.992 | 9.673 | 10.109 | 10.251 | 9.718 | 9.869 | 10.044 | 9.738 | 11.144 | 10.493 | 10.588 |
| SLSAASAPLAETSTPLRL | 10.831 | 9.876 | 11.587 | 8.372 | 10.840 | 9.819 | 11.513 | 10.535 | 10.180 | 11.550 | 9.954 | 12.279 | 8.144 | 11.566 | 12.691 | 10.702 | 9.565 | 10.302 | 11.173 | 7.805 | 10.589 | 9.881 | 9.431 | 9.345 | 10.585 | 9.761 | 9.407 | 10.520 | 9.448 | 11.218 | 10.849 | 10.464 |
| SSEPEAAPAPRRL | 11.186 | 10.527 | 8.969 | 10.447 | 11.566 | 6.326 | 9.943 | 11.975 | 9.934 | 7.578 | 9.093 | 8.939 | 11.004 | 9.780 | 9.923 | 8.658 | 9.679 | 7.709 | 9.070 | 10.440 | 11.107 | 9.591 | 10.951 | 9.395 | 8.387 | 8.741 | 9.221 | 8.270 | 7.776 | 10.161 | 8.051 | 8.591 |
After batch correction, missing value imputation and log transformation, the data was normalized using EigenMS to account for sample-to-sample variability. EigenMS normalization preserves the treatment group differences in the data by estimating treatment effects with an ANOVA model, then uses singular value decomposition on the model residual matrix to identify and remove the bias.
norm_d1 <- do_normalization_short(log2_d1, labels_d1)
hist_eigenms <- ggplot_truehist(unlist(norm_d1[-1,]), "log2-EigenMS")
qq_eigenms <- ggplot_carqq(unlist(norm_d1[-1,]), "log2-EigenMS")
pca_eigenms <- ggplot_pca(norm_d1[-1,], anno, "Label","log2-EigenMS")plot_grid(hist_eigenms, qq_eigenms, pca_eigenms, nrow = 1)Warning: Removed 1 rows containing missing values (`geom_point()`).
norm_d1_mod = norm_d1[-1,] %>%
as.data.frame() %>%
rownames_to_column(., var = "rowname") %>%
mutate(across(-rowname, as.numeric)) %>%
column_to_rownames(., var = "rowname")
#write.csv(norm_d1_mod, file = "after_norm_data.csv")
#rownames(norm_d1_mod) == feature_name$variable
rownames(norm_d1_mod) = feature_name$name
# display table
norm_d1_mod %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")| Pituitary_08 | Pituitary_02 | Pituitary_19 | Pituitary_29 | Pituitary_04 | Pituitary_11 | Pituitary_34 | Pituitary_06 | Pituitary_18 | Pituitary_16 | Pituitary_31 | Pituitary_36 | Pituitary_07 | Pituitary_22 | Pituitary_27 | Pituitary_25 | Pituitary_32 | Pituitary_30 | Pituitary_35 | Pituitary_09 | Pituitary_05 | Pituitary_10 | Pituitary_12 | Pituitary_13 | Pituitary_28 | Pituitary_03 | Pituitary_21 | Pituitary_26 | Pituitary_15 | Pituitary_24 | Pituitary_17 | Pituitary_23 | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DEGHDPVHESPVDTA | 10.784 | 8.534 | 10.489 | 7.977 | 9.713 | 8.756 | 10.156 | 9.492 | 11.211 | 9.471 | 9.596 | 10.321 | 9.015 | 9.000 | 9.808 | 9.156 | 9.614 | 9.553 | 10.719 | 11.543 | 10.121 | 10.278 | 9.770 | 9.788 | 10.351 | 10.277 | 9.189 | 10.841 | 9.868 | 10.996 | 10.596 | 9.609 |
| DPVHESPVDT | 9.427 | 10.133 | 10.215 | 9.694 | 9.873 | 9.347 | 9.917 | 9.788 | 10.218 | 9.613 | 9.327 | 9.690 | 10.447 | 10.237 | 10.709 | 9.878 | 9.285 | 9.625 | 9.074 | 9.521 | 8.771 | 9.785 | 11.121 | 9.907 | 10.503 | 9.750 | 10.049 | 9.406 | 10.890 | 10.841 | 9.774 | 9.927 |
| DPVHESPVDTA | 10.041 | 8.022 | 10.528 | 8.259 | 8.634 | 9.221 | 9.952 | 9.568 | 10.262 | 9.367 | 9.165 | 9.824 | 10.298 | 9.528 | 10.277 | 8.970 | 10.298 | 9.945 | 9.413 | 10.723 | 9.200 | 10.429 | 10.445 | 9.701 | 10.632 | 9.611 | 9.507 | 8.738 | 9.641 | 10.731 | 9.006 | 10.388 |
| ELDQLLHY | 8.890 | 8.001 | 10.415 | 9.771 | 8.317 | 8.604 | 8.912 | 9.150 | 9.458 | 9.580 | 9.967 | 10.039 | 8.440 | 8.949 | 8.959 | 8.655 | 9.848 | 8.421 | 9.668 | 10.016 | 9.249 | 9.909 | 9.281 | 8.290 | 11.239 | 9.272 | 8.743 | 9.275 | 9.599 | 9.687 | 9.979 | 10.615 |
| FNPYFDPL | 9.649 | 10.053 | 11.349 | 9.855 | 11.619 | 10.241 | 10.733 | 11.200 | 10.351 | 10.989 | 9.689 | 11.210 | 10.817 | 9.612 | 10.390 | 10.813 | 9.697 | 10.060 | 11.039 | 10.288 | 11.236 | 10.731 | 10.416 | 9.608 | 11.688 | 10.358 | 10.598 | 10.956 | 11.676 | 10.811 | 11.124 | 10.966 |
| GRGREPGAYPALDSRQE | 10.149 | 9.519 | 10.001 | 8.979 | 9.236 | 8.768 | 9.760 | 9.012 | 10.705 | 8.949 | 9.852 | 8.866 | 10.413 | 8.646 | 9.801 | 9.350 | 10.433 | 9.526 | 9.903 | 8.233 | 8.882 | 9.719 | 10.226 | 9.967 | 9.250 | 9.851 | 9.703 | 10.143 | 9.377 | 10.264 | 9.940 | 9.286 |
| LDEGHDPV | 9.944 | 8.561 | 9.814 | 9.585 | 9.536 | 8.945 | 9.727 | 9.054 | 10.514 | 9.765 | 9.837 | 11.082 | 10.720 | 9.428 | 9.991 | 9.943 | 9.933 | 8.643 | 10.966 | 10.689 | 9.308 | 9.949 | 9.365 | 9.684 | 7.711 | 10.276 | 9.404 | 10.477 | 9.946 | 10.331 | 9.684 | 9.940 |
| LDEGHDPVHESPV | 10.240 | 9.224 | 10.936 | 9.799 | 8.851 | 8.199 | 10.605 | 9.314 | 11.164 | 10.423 | 7.199 | 11.176 | 10.727 | 8.941 | 10.538 | 9.813 | 10.239 | 8.449 | 11.486 | 11.137 | 9.144 | 9.586 | 8.273 | 9.372 | 10.900 | 10.452 | 10.692 | 11.622 | 9.002 | 11.041 | 10.695 | 10.348 |
| LLDEGHDPVHESPVD | 10.570 | 10.173 | 10.275 | 10.539 | 9.583 | 10.806 | 10.038 | 10.170 | 11.247 | 10.750 | 9.675 | 10.933 | 10.801 | 9.127 | 10.015 | 9.696 | 9.401 | 9.463 | 10.414 | 7.915 | 9.422 | 10.687 | 9.731 | 10.589 | 10.389 | 9.400 | 9.304 | 10.410 | 9.916 | 10.735 | 10.804 | 9.813 |
| LLDEGHDPVHESPVDT | 10.191 | 9.658 | 9.950 | 9.398 | 9.560 | 8.993 | 9.796 | 10.398 | 11.324 | 9.651 | 9.437 | 10.442 | 8.154 | 9.405 | 10.139 | 9.875 | 8.750 | 10.181 | 10.195 | 10.628 | 10.024 | 10.377 | 10.151 | 9.795 | 10.090 | 9.193 | 9.755 | 10.278 | 10.246 | 10.989 | 10.900 | 10.219 |
| LLDEGHDPVHESPVDTA | 10.570 | 10.060 | 10.296 | 9.576 | 8.912 | 9.664 | 9.879 | 10.176 | 11.800 | 10.141 | 9.824 | 11.424 | 10.119 | 9.733 | 10.653 | 9.837 | 9.928 | 9.705 | 10.865 | 10.206 | 9.331 | 10.416 | 9.592 | 9.944 | 10.374 | 9.419 | 9.807 | 10.565 | 10.139 | 10.481 | 11.163 | 9.861 |
| NPYFDPLQWKNSDFE | 11.450 | 11.055 | 12.712 | 10.854 | 13.249 | 11.487 | 11.172 | 12.214 | 11.766 | 12.736 | 10.209 | 11.862 | 11.699 | 12.990 | 12.630 | 12.575 | 11.633 | 12.479 | 11.250 | 13.337 | 13.104 | 12.345 | 12.944 | 12.301 | 12.707 | 12.003 | 12.016 | 11.293 | 13.195 | 12.648 | 11.956 | 11.804 |
| PVHESPVDTA | 10.503 | 9.227 | 8.886 | 8.166 | 9.475 | 6.349 | 9.896 | 9.409 | 10.614 | 10.570 | 9.825 | 9.383 | 10.512 | 9.346 | 9.949 | 9.930 | 8.092 | 10.506 | 10.669 | 10.955 | 9.244 | 9.178 | 9.997 | 9.691 | 7.242 | 9.510 | 8.495 | 9.919 | 10.333 | 9.813 | 10.210 | 10.056 |
| Q(-17.03)KIAEKFSQ | 8.826 | 8.601 | 8.452 | 9.476 | 8.003 | 8.441 | 9.583 | 9.569 | 9.443 | 9.310 | 9.610 | 10.027 | 9.476 | 8.382 | 9.363 | 9.442 | 7.405 | 8.781 | 10.376 | 10.430 | 9.056 | 8.346 | 8.124 | 3.913 | 9.229 | 9.288 | 9.161 | 10.168 | 9.355 | 10.412 | 10.569 | 9.883 |
| Q(-17.03)KIAEKFSQR(-.98) | 9.565 | 9.219 | 10.282 | 8.003 | 9.360 | 8.879 | 10.391 | 9.661 | 10.681 | 9.405 | 9.462 | 9.647 | 9.619 | 8.614 | 9.557 | 9.352 | 9.244 | 9.083 | 10.766 | 10.591 | 9.344 | 9.837 | 9.606 | 10.120 | 9.311 | 10.097 | 9.518 | 10.306 | 9.298 | 10.164 | 10.041 | 8.873 |
| SEES(+79.97)QEKEY | 9.954 | 9.385 | 9.985 | 8.912 | 10.715 | 9.863 | 9.622 | 9.197 | 11.364 | 10.353 | 9.080 | 10.308 | 11.109 | 10.337 | 9.914 | 11.061 | 10.981 | 9.146 | 10.857 | 9.416 | 10.901 | 9.689 | 11.259 | 11.047 | 7.590 | 10.828 | 10.492 | 10.096 | 9.671 | 9.972 | 9.579 | 9.450 |
| PESAFSE | 9.732 | 9.108 | 8.885 | 10.218 | 9.638 | 9.493 | 10.120 | 9.982 | 10.715 | 10.519 | 10.841 | 11.528 | 10.116 | 9.985 | 9.610 | 9.892 | 9.840 | 8.349 | 10.895 | 9.907 | 9.358 | 9.586 | 8.809 | 9.267 | 9.647 | 9.561 | 9.263 | 9.995 | 10.289 | 9.511 | 10.089 | 10.592 |
| AGTQESVDSAKP | 9.112 | 8.548 | 9.231 | 7.708 | 9.333 | 8.616 | 7.875 | 9.915 | 10.945 | 8.569 | 9.868 | 10.958 | 9.991 | 10.334 | 10.860 | 9.638 | 10.767 | 8.736 | 10.778 | 11.121 | 9.758 | 9.542 | 9.810 | 9.485 | 6.955 | 10.825 | 9.114 | 10.377 | 9.950 | 9.102 | 10.206 | 10.259 |
| AGTQESVDSAKPRVY | 9.439 | 9.417 | 9.896 | 9.733 | 10.439 | 10.086 | 8.652 | 10.390 | 7.294 | 8.438 | 10.373 | 10.815 | 10.797 | 8.944 | 9.388 | 9.650 | 10.303 | 9.209 | 10.197 | 9.837 | 8.722 | 9.484 | 9.480 | 9.461 | 9.231 | 10.076 | 8.302 | 10.618 | 9.591 | 9.038 | 10.349 | 10.576 |
| EGFFRLT | 9.266 | 9.798 | 9.748 | 9.643 | 9.017 | 9.001 | 10.006 | 9.193 | 9.062 | 8.042 | 9.578 | 8.865 | 8.765 | 9.390 | 8.323 | 8.285 | 9.379 | 10.617 | 9.235 | 8.924 | 9.764 | 9.631 | 9.268 | 9.052 | 9.755 | 9.313 | 9.334 | 9.040 | 10.132 | 9.377 | 9.090 | 10.203 |
| ESVDSAKPRVY | 9.730 | 9.769 | 10.089 | 9.809 | 9.731 | 10.028 | 9.857 | 9.666 | 10.313 | 8.755 | 10.306 | 9.226 | 9.218 | 11.123 | 9.444 | 8.438 | 10.120 | 10.729 | 10.195 | 10.473 | 11.250 | 9.911 | 10.476 | 10.401 | 10.907 | 10.245 | 9.769 | 9.710 | 10.129 | 10.871 | 9.295 | 11.718 |
| GTQESVDSAKPRVY | 9.844 | 9.983 | 9.623 | 10.214 | 9.901 | 10.205 | 10.311 | 10.547 | 10.441 | 9.329 | 10.739 | 10.914 | 9.747 | 10.372 | 9.503 | 10.244 | 10.440 | 9.962 | 10.475 | 10.177 | 10.004 | 10.104 | 10.056 | 10.641 | 10.047 | 10.285 | 9.634 | 10.157 | 10.006 | 9.987 | 10.153 | 10.360 |
| LVQLAGTQESVDSAKPRVY | 10.098 | 11.499 | 9.366 | 10.331 | 10.524 | 10.443 | 10.015 | 10.133 | 12.153 | 10.856 | 10.512 | 11.428 | 8.612 | 9.981 | 10.244 | 9.716 | 10.206 | 9.908 | 11.024 | 9.577 | 10.307 | 11.210 | 9.084 | 10.076 | 11.392 | 9.953 | 8.966 | 11.056 | 10.541 | 10.801 | 11.294 | 10.172 |
| SVDSAKPRVY | 8.485 | 8.840 | 10.085 | 9.092 | 10.564 | 9.731 | 9.118 | 8.707 | 7.006 | 9.467 | 9.484 | 8.598 | 10.466 | 9.538 | 7.512 | 11.358 | 10.033 | 5.294 | 9.985 | 9.757 | 9.060 | 8.438 | 10.185 | 10.474 | 6.919 | 9.652 | 8.992 | 9.952 | 9.908 | 8.389 | 7.775 | 9.414 |
| TQESVDSAKPRVY | 9.408 | 9.851 | 10.199 | 10.076 | 9.228 | 10.232 | 9.755 | 9.189 | 9.704 | 8.845 | 10.149 | 9.596 | 10.601 | 9.912 | 8.759 | 10.329 | 10.620 | 8.958 | 9.846 | 8.711 | 10.123 | 9.426 | 10.306 | 10.071 | 9.339 | 9.909 | 9.613 | 10.329 | 9.579 | 9.350 | 9.675 | 9.361 |
| VQLAGTQESVDSAKP | 9.930 | 10.175 | 9.628 | 9.469 | 9.726 | 9.914 | 8.812 | 10.176 | 10.708 | 9.703 | 10.437 | 11.347 | 10.206 | 9.511 | 10.299 | 9.196 | 9.977 | 9.350 | 10.573 | 9.327 | 8.646 | 9.964 | 9.533 | 8.808 | 10.288 | 9.792 | 9.069 | 10.577 | 9.747 | 10.501 | 11.475 | 10.150 |
| VQLAGTQESVDSAKPR | 6.480 | 10.612 | 9.341 | 10.614 | 9.574 | 9.413 | 9.861 | 10.291 | 11.199 | 9.298 | 9.913 | 11.104 | 10.490 | 9.890 | 10.672 | 9.032 | 10.557 | 9.771 | 11.416 | 9.461 | 9.781 | 9.874 | 9.800 | 10.074 | 10.095 | 10.673 | 8.782 | 11.076 | 9.246 | 10.790 | 10.999 | 10.296 |
| VQLAGTQESVDSAKPRV | 9.540 | 9.545 | 9.272 | 7.818 | 10.156 | 8.707 | 8.603 | 10.710 | 11.626 | 9.447 | 10.862 | 11.038 | 10.810 | 9.445 | 9.519 | 9.236 | 9.909 | 9.316 | 10.477 | 8.382 | 8.689 | 9.769 | 9.928 | 9.466 | 10.686 | 10.031 | 8.396 | 10.736 | 9.273 | 10.545 | 12.546 | 10.270 |
| VQLAGTQESVDSAKPRVY | 9.857 | 10.408 | 9.983 | 10.193 | 9.759 | 9.979 | 8.680 | 10.518 | 8.216 | 9.315 | 10.244 | 10.499 | 9.580 | 9.100 | 9.586 | 9.412 | 9.979 | 9.673 | 9.989 | 9.879 | 8.857 | 9.381 | 9.403 | 9.261 | 10.198 | 9.596 | 8.589 | 10.425 | 9.408 | 9.579 | 11.220 | 10.392 |
| AEAFPLEF | 10.139 | 9.629 | 9.458 | 9.492 | 9.868 | 9.526 | 10.553 | 9.717 | 10.380 | 12.338 | 9.103 | 10.847 | 11.275 | 11.758 | 9.358 | 10.220 | 10.879 | 10.627 | 10.901 | 12.348 | 11.176 | 10.471 | 9.062 | 11.581 | 11.402 | 7.786 | 9.077 | 9.996 | 8.618 | 10.211 | 9.756 | 11.865 |
| AEEETAGGDGRPEPSP | 10.066 | 8.885 | 9.870 | 9.612 | 10.567 | 10.271 | 9.353 | 9.520 | 8.064 | 9.367 | 9.645 | 10.684 | 11.340 | 10.113 | 9.888 | 9.756 | 10.494 | 9.908 | 9.954 | 10.722 | 9.899 | 9.132 | 9.502 | 9.682 | 9.637 | 10.183 | 9.784 | 10.073 | 9.704 | 9.386 | 8.780 | 9.862 |
| AEEETAGGDGRPEPSPR | 10.380 | 8.683 | 8.723 | 9.918 | 10.848 | 10.570 | 9.796 | 9.779 | 9.008 | 9.474 | 9.373 | 9.531 | 11.185 | 10.566 | 10.081 | 10.233 | 10.982 | 10.555 | 9.981 | 9.314 | 10.410 | 9.548 | 10.131 | 10.386 | 8.588 | 9.840 | 9.669 | 9.982 | 9.571 | 8.827 | 8.831 | 9.438 |
| AEEETAGGDGRPEPSPRE(-.98) | 10.039 | 8.824 | 9.385 | 9.638 | 10.475 | 9.949 | 9.553 | 9.372 | 8.210 | 9.352 | 9.309 | 9.238 | 11.554 | 10.244 | 9.878 | 10.043 | 10.671 | 10.299 | 9.556 | 9.631 | 10.207 | 8.999 | 9.995 | 10.302 | 8.687 | 9.943 | 9.880 | 9.847 | 9.343 | 8.549 | 8.647 | 9.464 |
| EAFPLEF | 10.328 | 9.803 | 10.084 | 10.162 | 11.124 | 9.209 | 10.520 | 11.203 | 9.988 | 12.197 | 11.451 | 11.300 | 9.866 | 6.636 | 11.139 | 11.535 | 10.553 | 11.194 | 10.991 | 10.116 | 11.175 | 10.635 | 8.752 | 10.316 | 10.686 | 10.230 | 10.511 | 10.830 | 9.763 | 10.274 | 9.358 | 9.921 |
| EEETAGGDGRPEPSPRE(-.98) | 10.159 | 8.657 | 9.847 | 9.687 | 10.905 | 10.215 | 9.568 | 10.086 | 7.873 | 9.409 | 9.538 | 8.942 | 11.890 | 10.143 | 10.018 | 9.995 | 10.790 | 10.393 | 9.144 | 9.430 | 10.300 | 9.293 | 10.462 | 10.414 | 8.169 | 10.685 | 9.880 | 10.070 | 9.633 | 8.795 | 9.153 | 9.809 |
| EETAGGDGRPEPSPRE(-.98) | 9.258 | 8.694 | 9.685 | 8.692 | 10.668 | 7.680 | 8.419 | 8.007 | 6.510 | 9.639 | 7.419 | 7.143 | 9.645 | 8.144 | 8.981 | 9.660 | 10.053 | 7.977 | 8.024 | 7.845 | 10.017 | 7.084 | 9.498 | 10.249 | 6.219 | 9.617 | 9.727 | 7.361 | 9.844 | 6.888 | 8.118 | 9.767 |
| ELEGEQPD | 10.062 | 8.202 | 8.279 | 10.380 | 10.519 | 5.899 | 10.234 | 10.034 | 9.161 | 10.983 | 9.825 | 9.569 | 10.067 | 10.173 | 9.283 | 11.337 | 8.359 | 11.557 | 10.126 | 11.236 | 9.810 | 9.215 | 9.723 | 10.157 | 7.449 | 9.461 | 9.368 | 10.182 | 10.405 | 8.971 | 9.359 | 9.742 |
| FMTSEKSQTP | 9.757 | 7.923 | 8.130 | 9.394 | 10.553 | 10.303 | 11.118 | 10.209 | 10.669 | 10.414 | 8.513 | 10.352 | 10.201 | 9.195 | 9.828 | 9.542 | 9.268 | 9.638 | 8.565 | 8.259 | 10.000 | 9.794 | 9.337 | 10.115 | 9.768 | 8.496 | 10.208 | 10.020 | 8.763 | 9.772 | 8.657 | 9.069 |
| GPYRVEHF | 10.353 | 8.739 | 9.803 | 9.513 | 9.189 | 9.237 | 10.455 | 9.133 | 9.675 | 10.329 | 9.725 | 9.373 | 9.267 | 9.134 | 8.510 | 9.643 | 9.665 | 9.181 | 10.034 | 10.159 | 9.154 | 10.321 | 8.471 | 9.607 | 10.023 | 9.241 | 9.268 | 9.854 | 9.259 | 9.480 | 9.340 | 8.607 |
| GPYRVEHFRWGNPPKD | 11.352 | 10.481 | 10.610 | 10.076 | 10.104 | 4.866 | 11.013 | 7.313 | 9.966 | 9.912 | 10.250 | 6.439 | 9.451 | 6.798 | 9.273 | 9.592 | 10.407 | 10.084 | 9.725 | 8.408 | 6.142 | 10.407 | 9.563 | 9.682 | 9.405 | 10.686 | 10.432 | 10.993 | 9.028 | 10.641 | 11.078 | 8.373 |
| KYVMGHF | 9.777 | 9.255 | 9.372 | 9.699 | 9.801 | 9.949 | 10.498 | 9.595 | 9.554 | 9.580 | 9.929 | 9.651 | 9.411 | 8.323 | 8.564 | 9.147 | 9.199 | 8.750 | 9.975 | 8.717 | 9.064 | 10.220 | 8.446 | 9.431 | 9.322 | 9.010 | 9.195 | 9.900 | 9.297 | 9.849 | 9.575 | 9.784 |
| KYVMGHFRWD | 10.866 | 9.638 | 8.141 | 10.000 | 6.121 | 8.638 | 10.464 | 10.614 | 9.132 | 8.688 | 9.876 | 7.585 | 8.358 | 7.116 | 9.677 | 9.536 | 8.752 | 9.552 | 9.528 | 9.437 | 7.868 | 8.726 | 7.918 | 7.852 | 9.290 | 9.275 | 7.500 | 10.109 | 8.032 | 9.877 | 9.959 | 9.088 |
| R(+42.01)PVKVYPNVAENESAEAFPLEF | 10.406 | 9.500 | 10.700 | 10.491 | 9.011 | 9.330 | 11.983 | 10.798 | 12.131 | 10.826 | 10.381 | 9.389 | 11.601 | 10.982 | 10.408 | 12.482 | 11.819 | 9.566 | 13.073 | 12.253 | 11.099 | 10.907 | 10.891 | 9.053 | 11.520 | 9.849 | 11.025 | 12.444 | 10.012 | 11.984 | 11.013 | 11.923 |
| RAEEETAGGDGRPEPSPRE(-.98) | 9.233 | 7.989 | 9.176 | 8.804 | 9.432 | 9.047 | 10.534 | 10.316 | 8.388 | 9.247 | 8.926 | 7.867 | 12.830 | 10.448 | 10.789 | 11.535 | 11.612 | 10.611 | 9.621 | 11.007 | 9.605 | 9.637 | 10.044 | 11.050 | 7.874 | 10.937 | 9.395 | 10.425 | 8.764 | 8.265 | 8.360 | 7.786 |
| RPVKVYPNVAENE | 9.787 | 7.902 | 9.322 | 9.514 | 9.111 | 9.595 | 10.608 | 9.519 | 7.863 | 10.671 | 9.114 | 9.184 | 10.273 | 8.593 | 8.039 | 9.451 | 8.466 | 9.660 | 8.963 | 10.054 | 9.147 | 8.912 | 8.262 | 9.158 | 10.053 | 8.422 | 8.800 | 9.154 | 8.132 | 9.716 | 8.860 | 7.822 |
| RPVKVYPNVAENES(+79.97)AEAFPLE | 11.377 | 9.722 | 9.437 | 11.557 | 10.985 | 10.679 | 11.481 | 11.746 | 9.896 | 11.537 | 10.705 | 10.490 | 10.867 | 11.347 | 10.654 | 11.164 | 10.876 | 11.395 | 9.819 | 11.202 | 11.055 | 10.391 | 9.268 | 10.742 | 11.103 | 9.890 | 10.733 | 10.657 | 10.580 | 10.457 | 10.346 | 10.880 |
| RPVKVYPNVAENES(+79.97)AEAFPLEF | 11.792 | 9.860 | 11.333 | 11.214 | 14.099 | 10.733 | 12.428 | 12.399 | 11.047 | 11.746 | 11.441 | 12.120 | 11.472 | 10.992 | 9.371 | 12.577 | 11.525 | 11.747 | 12.119 | 11.519 | 13.607 | 11.184 | 11.879 | 12.009 | 12.453 | 11.997 | 11.415 | 12.555 | 11.657 | 12.950 | 11.399 | 13.245 |
| RPVKVYPNVAENESAEAFPLE | 11.076 | 10.051 | 8.729 | 11.014 | 8.682 | 9.712 | 11.661 | 10.830 | 11.261 | 10.787 | 10.552 | 10.031 | 10.243 | 10.237 | 10.278 | 10.519 | 10.169 | 10.961 | 9.703 | 9.792 | 9.873 | 10.392 | 8.830 | 9.442 | 10.850 | 9.395 | 9.848 | 10.016 | 9.874 | 10.138 | 10.395 | 10.387 |
| RPVKVYPNVAENESAEAFPLEF | 10.971 | 9.859 | 8.941 | 11.447 | 11.148 | 10.070 | 11.007 | 11.401 | 9.895 | 10.773 | 10.257 | 10.188 | 10.817 | 10.998 | 10.924 | 11.067 | 10.110 | 11.449 | 10.842 | 10.944 | 10.483 | 10.206 | 10.050 | 10.105 | 11.759 | 10.261 | 10.137 | 11.092 | 10.298 | 11.155 | 10.014 | 11.553 |
| RRPVKVYPNVAENESAEAFPLEF | 10.713 | 10.097 | 9.838 | 10.448 | 10.609 | 10.174 | 10.719 | 10.802 | 10.359 | 9.933 | 11.098 | 10.302 | 10.315 | 10.152 | 10.116 | 10.807 | 10.231 | 10.904 | 10.543 | 10.491 | 9.391 | 11.322 | 10.312 | 10.153 | 11.077 | 10.494 | 9.386 | 10.982 | 10.220 | 10.903 | 11.013 | 9.899 |
| S(+42.01)MEHFRWGKPV(-.98) | 10.655 | 9.958 | 7.490 | 9.321 | 9.146 | 8.253 | 9.888 | 9.977 | 11.277 | 8.988 | 10.408 | 8.599 | 8.538 | 8.532 | 10.273 | 9.789 | 8.991 | 9.541 | 9.444 | 8.153 | 9.071 | 8.954 | 7.894 | 8.888 | 10.054 | 10.164 | 8.882 | 10.528 | 9.374 | 9.586 | 10.615 | 8.737 |
| S(+42.01)YSMEHF | 10.039 | 9.850 | 8.318 | 10.576 | 10.083 | 11.465 | 9.952 | 10.452 | 9.546 | 10.350 | 10.653 | 10.803 | 8.636 | 10.138 | 9.607 | 9.765 | 9.443 | 9.726 | 8.734 | 9.731 | 9.806 | 10.124 | 8.349 | 9.419 | 9.826 | 8.338 | 9.381 | 9.148 | 10.061 | 9.746 | 9.294 | 9.369 |
| S(+42.01)YSMEHFRWGKPV(-.98) | 9.903 | 10.043 | 8.496 | 9.621 | 10.181 | 8.990 | 10.153 | 10.401 | 8.429 | 9.703 | 10.154 | 8.388 | 9.005 | 8.733 | 9.986 | 9.684 | 9.377 | 10.520 | 8.582 | 9.639 | 9.232 | 8.790 | 8.788 | 9.169 | 10.120 | 9.694 | 9.090 | 9.968 | 9.382 | 9.331 | 9.924 | 8.588 |
| SAEAFPLEF | 9.358 | 7.940 | 6.435 | 9.640 | 9.913 | 9.390 | 10.064 | 9.801 | 10.232 | 9.615 | 9.813 | 8.903 | 9.248 | 11.650 | 9.339 | 10.860 | 8.272 | 9.372 | 9.596 | 10.075 | 10.031 | 9.878 | 8.836 | 8.865 | 11.018 | 10.091 | 9.122 | 9.572 | 8.784 | 8.408 | 7.955 | 9.884 |
| SMEHFRWGKPV(-.98) | 10.129 | 10.881 | 7.581 | 10.658 | 10.154 | 9.251 | 10.674 | 7.084 | 11.233 | 10.317 | 9.314 | 9.289 | 10.015 | 8.377 | 9.963 | 9.475 | 8.483 | 10.066 | 9.961 | 7.441 | 9.134 | 10.340 | 8.141 | 7.806 | 9.852 | 8.606 | 8.946 | 10.173 | 8.648 | 10.367 | 10.423 | 8.974 |
| SYSMEHF | 9.247 | 8.959 | 10.628 | 9.595 | 8.941 | 10.125 | 8.791 | 9.971 | 11.319 | 10.421 | 9.747 | 11.126 | 8.862 | 10.113 | 9.399 | 9.842 | 9.514 | 10.520 | 8.001 | 9.419 | 10.574 | 11.313 | 9.868 | 10.707 | 11.133 | 8.301 | 9.714 | 9.176 | 9.298 | 10.469 | 10.752 | 8.903 |
| SYSMEHFRWGKPV(-.98) | 10.034 | 9.171 | 10.232 | 8.995 | 7.377 | 7.947 | 9.929 | 9.575 | 8.615 | 9.339 | 9.078 | 7.590 | 9.238 | 7.863 | 9.149 | 9.111 | 9.433 | 10.451 | 8.497 | 10.192 | 8.798 | 8.851 | 8.841 | 9.525 | 10.135 | 8.089 | 8.811 | 9.178 | 7.823 | 10.202 | 10.653 | 8.794 |
| TPLVTLF | 9.350 | 8.578 | 6.374 | 10.409 | 10.283 | 8.861 | 10.273 | 10.885 | 10.514 | 10.728 | 8.728 | 8.891 | 8.950 | 9.773 | 11.041 | 10.410 | 8.145 | 10.333 | 7.686 | 9.978 | 10.180 | 10.661 | 7.549 | 9.170 | 8.097 | 9.805 | 8.276 | 10.037 | 8.420 | 10.788 | 10.717 | 10.481 |
| TPLVTLFKNAIIKN | 9.637 | 7.612 | 9.638 | 9.027 | 7.682 | 9.019 | 9.618 | 9.349 | 8.392 | 9.830 | 8.519 | 9.383 | 8.836 | 7.118 | 10.233 | 9.761 | 8.067 | 8.456 | 8.975 | 9.760 | 8.662 | 8.780 | 8.324 | 7.643 | 10.949 | 8.221 | 9.558 | 8.649 | 8.978 | 8.046 | 8.462 | 7.941 |
| Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF | 14.631 | 9.130 | 8.671 | 12.748 | 15.697 | 14.656 | 13.897 | 15.015 | 14.012 | 16.272 | 12.285 | 15.327 | 13.763 | 15.918 | 14.891 | 15.069 | 13.023 | 12.769 | 12.512 | 14.933 | 15.016 | 12.981 | 11.093 | 14.754 | 10.266 | 11.492 | 12.313 | 10.370 | 14.599 | 12.402 | 11.483 | 13.321 |
| Y(+42.01)GGFMTSEK | 9.790 | 7.508 | 9.223 | 9.774 | 7.992 | 8.143 | 9.487 | 9.728 | 7.568 | 9.261 | 10.313 | 7.617 | 8.557 | 9.064 | 6.490 | 9.847 | 7.459 | 10.480 | 9.003 | 9.271 | 9.152 | 10.078 | 7.481 | 6.843 | 10.405 | 7.096 | 9.074 | 8.583 | 8.486 | 7.171 | 10.943 | 8.902 |
| Y(+42.01)GGFMTSEKSQ | 9.810 | 8.728 | 9.409 | 10.460 | 8.508 | 10.362 | 10.691 | 9.180 | 8.791 | 9.871 | 9.011 | 8.027 | 8.896 | 7.871 | 9.608 | 10.447 | 8.493 | 6.122 | 9.760 | 8.490 | 8.948 | 9.825 | 8.345 | 8.939 | 10.255 | 8.571 | 9.992 | 9.747 | 9.511 | 7.954 | 7.522 | 10.089 |
| Y(+42.01)GGFMTSEKSQTP | 11.121 | 9.072 | 9.012 | 10.730 | 10.752 | 11.061 | 11.474 | 11.825 | 11.778 | 12.313 | 11.351 | 12.048 | 11.742 | 11.543 | 11.777 | 10.750 | 10.775 | 10.609 | 10.536 | 11.073 | 10.860 | 10.599 | 9.964 | 10.925 | 10.367 | 9.571 | 10.840 | 10.641 | 10.686 | 10.072 | 10.264 | 10.936 |
| Y(+42.01)GGFMTSEKSQTPL | 10.968 | 10.011 | 9.804 | 9.834 | 10.597 | 11.395 | 11.138 | 12.451 | 11.292 | 11.702 | 10.836 | 11.592 | 9.735 | 10.467 | 10.877 | 10.507 | 10.275 | 10.290 | 10.256 | 11.120 | 11.114 | 11.419 | 9.110 | 10.060 | 11.578 | 10.198 | 10.009 | 10.398 | 11.233 | 10.566 | 10.625 | 11.337 |
| Y(+42.01)GGFMTSEKSQTPLV | 10.721 | 9.855 | 9.231 | 11.046 | 11.383 | 11.677 | 11.282 | 12.231 | 11.056 | 11.693 | 10.277 | 11.800 | 10.010 | 11.488 | 11.172 | 10.440 | 10.381 | 11.056 | 10.378 | 10.920 | 11.553 | 11.116 | 8.885 | 10.567 | 10.906 | 10.287 | 10.819 | 10.322 | 11.119 | 9.702 | 10.628 | 10.918 |
| Y(+42.01)GGFMTSEKSQTPLVT | 11.192 | 10.015 | 8.280 | 10.722 | 10.825 | 11.385 | 10.770 | 12.133 | 10.904 | 11.040 | 10.590 | 11.464 | 10.271 | 11.336 | 10.899 | 10.652 | 10.148 | 11.068 | 9.781 | 10.283 | 11.218 | 9.873 | 9.524 | 9.806 | 11.891 | 9.859 | 9.883 | 10.302 | 10.667 | 11.060 | 10.129 | 11.508 |
| Y(+42.01)GGFMTSEKSQTPLVTL | 11.774 | 10.166 | 10.819 | 11.803 | 13.459 | 11.729 | 11.908 | 13.921 | 12.425 | 12.346 | 11.600 | 12.041 | 11.613 | 12.934 | 12.356 | 12.157 | 12.215 | 12.252 | 11.525 | 12.025 | 13.207 | 12.775 | 11.111 | 11.658 | 12.854 | 12.263 | 12.084 | 12.685 | 12.753 | 12.484 | 11.948 | 13.750 |
| Y(+42.01)GGFMTSEKSQTPLVTLF | 14.952 | 11.903 | 11.423 | 14.427 | 18.713 | 16.737 | 15.461 | 18.018 | 16.197 | 17.091 | 14.769 | 16.549 | 15.841 | 18.102 | 16.080 | 16.722 | 15.124 | 15.473 | 14.874 | 16.765 | 17.822 | 17.197 | 12.747 | 15.901 | 12.663 | 12.795 | 13.978 | 14.940 | 17.166 | 16.452 | 14.816 | 16.920 |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK | 12.788 | 10.713 | 11.824 | 11.047 | 11.588 | 11.545 | 11.818 | 14.238 | 12.779 | 12.788 | 12.955 | 12.692 | 13.172 | 13.190 | 12.736 | 12.850 | 13.394 | 13.999 | 13.054 | 13.596 | 14.169 | 11.178 | 11.614 | 11.479 | 14.537 | 12.260 | 12.022 | 11.445 | 12.722 | 13.030 | 12.613 | 13.458 |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN | 12.300 | 10.915 | 12.041 | 11.491 | 12.906 | 12.026 | 11.767 | 13.890 | 12.266 | 12.590 | 12.272 | 12.188 | 12.860 | 12.723 | 12.635 | 13.425 | 12.642 | 12.702 | 12.554 | 12.747 | 13.984 | 12.317 | 11.869 | 12.189 | 14.125 | 12.243 | 11.728 | 11.558 | 13.004 | 13.258 | 12.790 | 14.327 |
| Y(+42.01)SMEHFRWGKPV(-.98) | 11.022 | 9.564 | 6.819 | 9.388 | 8.851 | 9.115 | 11.202 | 10.380 | 11.300 | 9.978 | 9.944 | 9.410 | 9.039 | 8.891 | 10.309 | 9.654 | 8.183 | 9.674 | 9.463 | 9.532 | 8.830 | 9.114 | 8.341 | 8.049 | 9.632 | 8.965 | 8.913 | 10.645 | 8.576 | 10.121 | 10.314 | 9.448 |
| YGGFMTSEKSQTPLVT | 9.369 | 8.006 | 10.908 | 7.052 | 7.995 | 8.870 | 8.484 | 10.983 | 11.449 | 9.974 | 9.622 | 9.493 | 9.296 | 10.672 | 9.641 | 9.452 | 10.406 | 10.017 | 10.759 | 11.921 | 9.805 | 11.150 | 9.901 | 9.954 | 12.218 | 8.494 | 10.098 | 11.053 | 8.439 | 10.066 | 10.042 | 9.448 |
| YGGFMTSEKSQTPLVTL | 10.715 | 9.784 | 11.422 | 9.274 | 10.020 | 11.075 | 9.730 | 11.249 | 12.184 | 11.702 | 10.761 | 12.382 | 11.835 | 11.019 | 11.453 | 10.447 | 9.555 | 9.973 | 11.453 | 11.259 | 10.969 | 10.980 | 9.742 | 10.857 | 11.166 | 9.280 | 9.707 | 9.347 | 11.916 | 11.631 | 12.454 | 10.758 |
| YGGFMTSEKSQTPLVTLF | 10.668 | 10.855 | 11.801 | 11.683 | 12.426 | 10.695 | 11.096 | 12.196 | 13.159 | 13.083 | 10.706 | 12.229 | 11.397 | 12.952 | 10.959 | 12.033 | 10.689 | 11.809 | 11.387 | 11.762 | 13.159 | 12.806 | 11.116 | 12.953 | 12.236 | 12.327 | 11.351 | 11.916 | 11.770 | 12.664 | 12.381 | 12.403 |
| YGGFMTSEKSQTPLVTLFKNAIIKN | 9.692 | 10.019 | 10.545 | 10.545 | 10.875 | 9.316 | 8.709 | 11.074 | 10.792 | 12.263 | 10.506 | 10.439 | 9.593 | 11.066 | 9.951 | 10.430 | 10.038 | 12.192 | 11.409 | 10.882 | 11.198 | 9.082 | 10.258 | 11.478 | 13.592 | 9.422 | 10.548 | 7.892 | 8.862 | 12.513 | 12.496 | 10.520 |
| LPGLLLF | 10.755 | 10.993 | 10.041 | 8.664 | 12.688 | 9.624 | 10.071 | 11.814 | 11.975 | 10.662 | 10.237 | 9.270 | 10.664 | 13.162 | 10.501 | 11.643 | 9.494 | 11.310 | 9.075 | 11.602 | 12.976 | 10.479 | 11.492 | 11.685 | 8.843 | 10.716 | 11.923 | 11.983 | 11.474 | 11.736 | 11.382 | 11.781 |
| LPHLPGLLLF | 10.910 | 10.862 | 12.252 | 8.922 | 11.820 | 8.722 | 11.220 | 11.036 | 11.630 | 11.537 | 10.003 | 8.340 | 10.157 | 10.041 | 11.650 | 12.350 | 9.728 | 10.673 | 10.528 | 12.336 | 12.608 | 10.939 | 12.021 | 12.939 | 9.760 | 12.380 | 12.086 | 9.212 | 11.681 | 13.003 | 10.330 | 12.659 |
| TPLPELFDRVVML | 6.582 | 5.516 | 12.778 | 12.346 | 9.515 | 6.239 | 10.748 | 10.694 | 12.665 | 7.966 | 7.743 | 9.159 | 11.642 | 12.286 | 12.060 | 8.631 | 10.788 | 11.244 | 8.945 | 10.927 | 11.150 | 12.426 | 10.284 | 11.804 | 13.561 | 13.398 | 10.206 | 12.926 | 11.197 | 13.640 | 13.493 | 10.961 |
| F(+42.01)PAMPLSSLFANAVLRAQHLH | 11.815 | 12.604 | 11.098 | 12.085 | 12.449 | 11.576 | 12.865 | 12.629 | 11.733 | 12.533 | 11.232 | 11.345 | 12.827 | 12.642 | 9.258 | 14.088 | 10.708 | 12.214 | 13.864 | 11.753 | 10.661 | 12.519 | 11.983 | 11.092 | 10.577 | 9.220 | 12.671 | 12.393 | 12.116 | 13.855 | 10.648 | 12.014 |
| FPAM(+15.99)PLSSLFANAVLR | 11.431 | 11.302 | 12.781 | 10.435 | 13.220 | 11.568 | 9.189 | 11.362 | 10.809 | 12.480 | 10.692 | 11.349 | 11.903 | 12.915 | 11.116 | 13.102 | 12.757 | 11.176 | 11.269 | 11.813 | 13.889 | 10.914 | 13.011 | 13.053 | 10.961 | 9.594 | 12.216 | 12.827 | 12.663 | 10.886 | 11.152 | 10.890 |
| FPAM(+15.99)PLSSLFANAVLRAQH | 10.285 | 11.636 | 10.515 | 10.230 | 10.388 | 11.836 | 11.678 | 10.465 | 10.251 | 11.194 | 10.232 | 9.948 | 10.753 | 11.118 | 9.910 | 10.632 | 12.234 | 9.601 | 8.944 | 10.630 | 12.046 | 10.270 | 11.611 | 12.011 | 8.724 | 8.767 | 11.200 | 11.349 | 10.225 | 10.249 | 8.149 | 11.959 |
| FPAM(+15.99)PLSSLFANAVLRAQHLH | 10.179 | 11.230 | 12.338 | 8.446 | 11.580 | 11.415 | 9.077 | 9.605 | 9.984 | 11.261 | 11.028 | 10.119 | 10.215 | 9.502 | 9.979 | 9.651 | 11.508 | 10.722 | 10.110 | 9.605 | 10.988 | 10.751 | 12.114 | 12.283 | 10.153 | 9.688 | 11.150 | 9.257 | 10.949 | 10.947 | 8.151 | 9.220 |
| FPAMPLS | 8.678 | 9.590 | 8.878 | 8.984 | 10.439 | 10.446 | 9.062 | 9.303 | 8.577 | 9.358 | 8.506 | 9.277 | 8.844 | 9.647 | 8.073 | 9.549 | 7.796 | 7.734 | 9.415 | 8.788 | 9.156 | 8.828 | 9.385 | 9.076 | 9.167 | 8.109 | 9.949 | 8.978 | 9.058 | 9.322 | 8.486 | 9.674 |
| FPAMPLSS | 9.098 | 10.865 | 10.825 | 9.924 | 10.167 | 11.338 | 9.450 | 9.533 | 9.737 | 8.809 | 9.802 | 10.573 | 9.249 | 9.901 | 9.180 | 9.002 | 9.054 | 9.013 | 9.567 | 9.282 | 10.111 | 9.799 | 10.025 | 9.908 | 9.006 | 9.179 | 10.781 | 9.783 | 10.461 | 10.225 | 9.774 | 9.897 |
| FPAMPLSSL | 9.480 | 10.912 | 11.565 | 10.558 | 11.624 | 11.955 | 8.887 | 10.707 | 8.344 | 10.272 | 10.186 | 10.886 | 10.208 | 10.118 | 9.198 | 10.309 | 9.577 | 9.526 | 9.944 | 9.552 | 10.765 | 10.065 | 10.462 | 10.340 | 10.181 | 10.090 | 10.769 | 10.073 | 10.660 | 10.222 | 10.266 | 10.433 |
| FPAMPLSSLF | 9.320 | 10.246 | 10.664 | 9.741 | 11.886 | 11.303 | 9.025 | 10.478 | 9.950 | 10.553 | 10.397 | 10.591 | 10.463 | 11.962 | 9.616 | 10.702 | 10.288 | 9.213 | 9.661 | 9.632 | 11.322 | 9.680 | 10.700 | 11.279 | 9.566 | 9.966 | 11.369 | 8.296 | 12.079 | 10.590 | 9.103 | 10.776 |
| FPAMPLSSLFA | 10.252 | 11.975 | 14.973 | 11.851 | 15.091 | 12.988 | 9.441 | 12.320 | 11.228 | 11.842 | 12.328 | 12.403 | 12.571 | 14.208 | 11.769 | 11.721 | 12.733 | 11.255 | 10.969 | 11.605 | 14.319 | 11.961 | 13.748 | 13.905 | 12.071 | 13.081 | 13.942 | 11.146 | 15.020 | 13.796 | 11.896 | 13.655 |
| FPAMPLSSLFAN | 10.276 | 11.635 | 14.339 | 11.783 | 14.655 | 13.012 | 9.800 | 12.274 | 11.136 | 11.593 | 11.695 | 12.088 | 12.194 | 14.044 | 11.484 | 11.740 | 12.751 | 11.391 | 11.374 | 11.710 | 14.004 | 11.944 | 13.778 | 13.424 | 11.823 | 12.422 | 13.661 | 10.973 | 14.318 | 13.578 | 11.734 | 13.559 |
| FPAMPLSSLFANA | 10.368 | 11.652 | 14.661 | 11.860 | 14.825 | 6.264 | 12.658 | 12.541 | 11.278 | 13.006 | 11.771 | 12.325 | 12.574 | 10.067 | 12.194 | 12.597 | 12.849 | 13.558 | 11.727 | 12.018 | 14.671 | 8.567 | 14.428 | 14.140 | 12.897 | 13.384 | 14.050 | 10.813 | 15.159 | 14.214 | 12.382 | 15.136 |
| FPAMPLSSLFANAVLR | 10.578 | 11.804 | 14.302 | 11.929 | 14.552 | 11.935 | 10.163 | 12.379 | 12.284 | 11.213 | 12.276 | 11.769 | 12.339 | 13.881 | 11.925 | 12.468 | 12.723 | 11.668 | 11.720 | 11.555 | 14.258 | 12.194 | 14.058 | 14.082 | 12.296 | 13.384 | 13.631 | 11.725 | 14.686 | 14.308 | 11.948 | 13.990 |
| FPAMPLSSLFANAVLRA | 10.856 | 10.838 | 9.845 | 10.384 | 12.662 | 11.015 | 9.723 | 11.748 | 9.783 | 10.114 | 11.096 | 10.178 | 9.802 | 11.412 | 8.779 | 11.252 | 9.141 | 8.382 | 10.955 | 9.565 | 10.802 | 9.255 | 8.217 | 11.701 | 10.042 | 10.402 | 11.498 | 9.550 | 12.654 | 11.745 | 9.127 | 11.666 |
| FPAMPLSSLFANAVLRAQ | 12.352 | 11.357 | 10.439 | 13.333 | 15.756 | 12.906 | 11.159 | 13.832 | 13.139 | 12.552 | 14.171 | 14.615 | 14.467 | 16.004 | 14.595 | 14.839 | 14.911 | 14.577 | 13.822 | 13.593 | 13.957 | 12.126 | 12.771 | 14.614 | 11.444 | 13.311 | 13.397 | 11.292 | 14.775 | 13.586 | 11.695 | 12.845 |
| FPAMPLSSLFANAVLRAQH | 10.058 | 11.531 | 11.806 | 11.422 | 12.701 | 11.249 | 9.500 | 11.044 | 8.907 | 10.026 | 11.264 | 9.819 | 10.358 | 11.019 | 10.067 | 11.074 | 11.406 | 11.148 | 10.667 | 10.272 | 11.325 | 10.482 | 11.965 | 11.595 | 10.452 | 11.527 | 11.154 | 9.869 | 11.901 | 12.470 | 10.266 | 11.820 |
| FPAMPLSSLFANAVLRAQHLH | 10.447 | 11.869 | 11.968 | 11.406 | 10.458 | 11.043 | 10.044 | 11.177 | 10.046 | 9.718 | 11.844 | 10.303 | 10.046 | 9.609 | 10.811 | 11.483 | 11.959 | 11.368 | 10.744 | 10.142 | 10.638 | 11.117 | 11.876 | 11.476 | 10.625 | 11.118 | 10.848 | 9.835 | 11.518 | 12.394 | 10.046 | 11.407 |
| FPAMPLSSLFANAVLRAQHLHQ | 10.607 | 11.988 | 11.754 | 11.501 | 10.970 | 11.110 | 10.610 | 11.575 | 11.344 | 10.258 | 11.849 | 10.544 | 10.740 | 10.728 | 11.215 | 12.070 | 11.848 | 11.690 | 11.141 | 10.175 | 11.120 | 11.367 | 12.626 | 12.042 | 11.403 | 11.426 | 11.341 | 10.310 | 11.753 | 12.776 | 10.503 | 11.683 |
| FPAMPLSSLFANAVLRAQHLHQL | 11.717 | 12.731 | 12.777 | 12.285 | 10.265 | 11.131 | 11.516 | 13.035 | 11.760 | 10.878 | 13.299 | 11.936 | 10.693 | 9.330 | 11.537 | 13.180 | 12.875 | 11.846 | 12.389 | 11.250 | 11.312 | 12.320 | 11.703 | 12.217 | 11.157 | 11.941 | 11.581 | 10.912 | 12.616 | 13.863 | 10.902 | 13.258 |
| FPAMPLSSLFANAVLRAQHLHQLA | 11.949 | 12.873 | 12.620 | 12.366 | 10.917 | 11.334 | 11.320 | 12.906 | 12.065 | 11.060 | 13.602 | 12.011 | 10.910 | 10.250 | 11.364 | 13.200 | 12.787 | 12.031 | 12.236 | 11.202 | 11.485 | 12.402 | 12.052 | 12.651 | 11.812 | 12.106 | 11.742 | 11.188 | 12.493 | 14.062 | 11.148 | 13.324 |
| FPAMPLSSLFANAVLRAQHLHQLAAD | 11.526 | 11.684 | 11.763 | 12.321 | 11.354 | 11.053 | 11.828 | 13.223 | 11.809 | 10.742 | 12.319 | 11.232 | 10.731 | 10.731 | 10.478 | 13.555 | 12.002 | 10.737 | 12.483 | 10.931 | 11.297 | 11.841 | 11.724 | 12.972 | 11.680 | 11.305 | 11.632 | 11.950 | 12.368 | 13.781 | 10.623 | 12.953 |
| GPVQFLSRIF | 9.344 | 9.443 | 10.153 | 9.508 | 9.171 | 9.556 | 10.249 | 10.143 | 10.628 | 10.394 | 7.751 | 9.937 | 9.726 | 10.892 | 11.017 | 7.500 | 7.972 | 10.320 | 8.611 | 10.892 | 9.403 | 9.748 | 10.407 | 10.220 | 9.698 | 10.791 | 9.048 | 10.570 | 9.861 | 10.058 | 10.681 | 8.606 |
| PVQFLSRIF | 8.529 | 8.273 | 8.786 | 8.410 | 8.948 | 9.115 | 9.715 | 9.980 | 9.711 | 8.372 | 6.711 | 9.276 | 9.468 | 9.715 | 10.526 | 9.190 | 7.681 | 9.993 | 7.980 | 10.203 | 8.888 | 9.525 | 9.628 | 8.480 | 9.056 | 10.330 | 9.796 | 7.293 | 7.801 | 9.848 | 10.883 | 10.289 |
| SPRIGQILK | 8.974 | 8.974 | 8.025 | 8.692 | 9.112 | 10.296 | 6.732 | 8.903 | 7.275 | 7.685 | 5.757 | 9.301 | 9.409 | 9.836 | 10.227 | 9.582 | 8.631 | 10.059 | 8.839 | 8.305 | 8.887 | 8.747 | 9.479 | 9.494 | 9.022 | 7.720 | 9.969 | 7.603 | 8.184 | 7.631 | 5.531 | 10.018 |
| SPRIGQILKQ | 8.078 | 6.759 | 4.407 | 6.927 | 8.931 | 6.048 | 7.906 | 8.367 | 7.425 | 7.937 | 5.605 | 8.597 | 6.811 | 6.902 | 6.180 | 8.428 | 6.134 | 9.827 | 7.831 | 6.503 | 6.817 | 6.980 | 7.209 | 6.858 | 7.845 | 6.065 | 6.277 | 6.043 | 4.997 | 6.458 | 9.888 | 7.758 |
| TDMELLRF | 7.105 | 6.031 | 6.862 | 7.937 | 7.885 | 7.252 | 7.535 | 8.499 | 8.474 | 7.715 | 9.609 | 7.809 | 8.828 | 9.594 | 10.004 | 7.350 | 7.969 | 9.450 | 7.893 | 8.107 | 7.356 | 7.384 | 7.547 | 5.994 | 8.435 | 11.185 | 8.084 | 5.261 | 11.306 | 8.615 | 5.601 | 5.792 |
| ASLDKFLASVSTVLTSKYR | 10.389 | 12.977 | 11.871 | 11.104 | 12.586 | 11.707 | 12.117 | 10.686 | 11.729 | 11.510 | 12.561 | 10.872 | 9.651 | 12.425 | 11.272 | 12.982 | 13.150 | 11.873 | 9.276 | 11.859 | 11.471 | 12.912 | 11.396 | 11.396 | 12.765 | 13.767 | 11.628 | 8.890 | 13.203 | 10.753 | 12.106 | 8.508 |
| FLASVSTVLTSKYR | 9.215 | 12.144 | 11.169 | 10.595 | 9.349 | 10.805 | 11.428 | 10.455 | 10.853 | 11.202 | 11.836 | 10.796 | 9.014 | 10.303 | 8.038 | 11.183 | 11.483 | 9.427 | 7.869 | 9.673 | 10.842 | 11.338 | 10.140 | 9.349 | 10.725 | 10.354 | 9.984 | 10.726 | 10.622 | 9.403 | 11.672 | 9.119 |
| SLDKFLA | 7.143 | 5.923 | 4.250 | 6.030 | 7.406 | 6.659 | 5.553 | 7.239 | 6.128 | 6.829 | 3.122 | 5.741 | 6.343 | 7.720 | 6.929 | 7.570 | 6.254 | 9.890 | 7.572 | 7.502 | 6.895 | 6.958 | 6.074 | 4.945 | 9.126 | 6.099 | 4.653 | 5.055 | 5.049 | 9.360 | 7.034 | 6.790 |
| SLDKFLASVSTVLTSKYR | 9.822 | 11.583 | 10.329 | 10.375 | 9.169 | 11.699 | 13.046 | 9.976 | 11.667 | 5.956 | 13.100 | 9.578 | 8.831 | 7.874 | 12.714 | 9.709 | 12.977 | 11.347 | 9.349 | 10.122 | 11.762 | 11.422 | 10.958 | 10.372 | 11.528 | 11.944 | 9.586 | 10.205 | 11.088 | 10.942 | 10.805 | 11.130 |
| SVSTVLTSKYR | 8.237 | 10.046 | 10.045 | 8.468 | 8.825 | 10.638 | 7.374 | 8.087 | 9.380 | 5.967 | 11.027 | 9.764 | 9.407 | 11.060 | 7.276 | 7.959 | 10.960 | 8.542 | 9.073 | 8.362 | 10.367 | 9.629 | 9.737 | 9.398 | 8.885 | 9.963 | 8.794 | 9.370 | 9.311 | 8.767 | 9.399 | 11.065 |
| TPAMHASLDKFLASVSTVLTSKYR | 9.815 | 12.188 | 10.657 | 8.644 | 12.094 | 12.154 | 11.077 | 11.727 | 11.435 | 8.093 | 12.905 | 9.158 | 10.445 | 12.037 | 11.057 | 12.999 | 14.250 | 11.129 | 9.154 | 8.906 | 10.661 | 12.762 | 12.139 | 11.057 | 11.868 | 12.794 | 11.248 | 7.364 | 13.316 | 9.324 | 11.176 | 10.284 |
| VHLTDAEKAAVN | 9.227 | 9.785 | 10.442 | 8.888 | 9.621 | 10.721 | 8.211 | 9.312 | 9.426 | 7.504 | 11.040 | 10.806 | 9.069 | 10.554 | 7.783 | 8.545 | 10.938 | 9.557 | 9.947 | 9.712 | 10.107 | 9.505 | 9.982 | 9.671 | 9.455 | 10.714 | 9.366 | 9.890 | 9.689 | 9.843 | 9.450 | 9.463 |
| VHLTDAEKAAVNG | 9.251 | 9.155 | 9.763 | 8.993 | 9.364 | 9.441 | 8.069 | 9.392 | 9.103 | 10.361 | 10.318 | 9.849 | 7.641 | 9.250 | 7.226 | 8.135 | 10.536 | 9.039 | 9.445 | 8.861 | 9.324 | 9.640 | 9.229 | 9.372 | 8.924 | 10.157 | 8.576 | 9.226 | 9.003 | 9.035 | 8.639 | 8.780 |
| AAFQKVVAGVASALAHKYH | 9.324 | 10.990 | 11.165 | 8.956 | 10.191 | 10.190 | 5.760 | 9.042 | 9.306 | 10.228 | 10.646 | 7.711 | 8.939 | 10.978 | 10.697 | 7.469 | 10.609 | 8.375 | 8.827 | 9.074 | 8.456 | 10.188 | 9.818 | 9.020 | 9.921 | 10.895 | 9.782 | 9.870 | 10.062 | 10.113 | 10.919 | 9.462 |
| AFQKVVAGVASALAHKYH | 9.299 | 11.226 | 11.280 | 6.946 | 7.918 | 9.744 | 10.639 | 9.453 | 9.714 | 10.091 | 10.596 | 8.436 | 9.489 | 4.840 | 10.559 | 10.747 | 10.731 | 8.463 | 8.458 | 8.564 | 8.916 | 10.130 | 9.858 | 8.850 | 9.597 | 10.349 | 8.967 | 8.611 | 9.173 | 9.073 | 9.622 | 7.209 |
| AQAAFQKVVAGVASALAHKYH | 9.672 | 9.576 | 9.429 | 9.135 | 9.017 | 10.195 | 9.586 | 7.957 | 9.376 | 6.374 | 9.702 | 8.002 | 9.920 | 9.801 | 9.987 | 10.232 | 10.764 | 10.525 | 6.465 | 8.193 | 8.561 | 10.582 | 9.936 | 8.924 | 9.916 | 10.477 | 9.224 | 8.977 | 9.527 | 9.072 | 10.049 | 6.192 |
| ASALAHKYH | 7.976 | 8.639 | 9.232 | 9.343 | 9.301 | 9.548 | 9.978 | 8.803 | 9.749 | 10.428 | 10.099 | 9.130 | 10.049 | 8.877 | 10.040 | 8.541 | 10.612 | 6.977 | 8.476 | 8.703 | 8.978 | 8.912 | 9.503 | 9.109 | 8.426 | 10.116 | 9.684 | 10.292 | 8.966 | 8.682 | 8.396 | 8.524 |
| GVASALAHKYH | 8.759 | 9.396 | 10.441 | 9.198 | 9.679 | 10.158 | 7.556 | 8.935 | 5.996 | 7.210 | 10.496 | 8.509 | 9.732 | 9.558 | 7.580 | 8.723 | 10.667 | 9.304 | 8.750 | 9.318 | 9.047 | 8.643 | 9.505 | 9.336 | 8.905 | 10.636 | 8.321 | 9.448 | 9.230 | 8.834 | 8.636 | 8.558 |
| QAAFQKVVAGVASALAHKYH | 9.535 | 11.255 | 10.998 | 9.234 | 8.078 | 10.881 | 10.999 | 9.033 | 9.300 | 10.358 | 10.534 | 8.461 | 9.585 | 7.405 | 10.487 | 7.942 | 11.139 | 9.031 | 7.524 | 8.336 | 8.390 | 9.865 | 9.699 | 9.440 | 9.532 | 10.481 | 9.060 | 7.751 | 9.576 | 9.259 | 9.773 | 8.100 |
| VHLTDAEKA | 8.390 | 10.293 | 8.047 | 8.439 | 9.326 | 6.807 | 8.773 | 7.536 | 9.779 | 6.693 | 9.374 | 9.074 | 6.816 | 9.694 | 6.271 | 8.050 | 7.241 | 10.444 | 7.962 | 7.740 | 10.390 | 7.651 | 8.868 | 8.473 | 6.520 | 10.428 | 9.377 | 8.339 | 10.373 | 8.163 | 8.026 | 8.522 |
| GPNLVARSKEALA | 8.783 | 9.638 | 10.905 | 9.565 | 8.562 | 9.956 | 8.606 | 9.053 | 9.022 | 7.521 | 10.433 | 8.275 | 8.522 | 9.223 | 7.736 | 7.967 | 10.806 | 8.213 | 10.082 | 7.869 | 9.031 | 9.669 | 9.278 | 9.642 | 9.898 | 10.549 | 8.879 | 9.733 | 9.647 | 8.765 | 9.878 | 9.086 |
| AKVAVLGA | 10.404 | 9.514 | 7.990 | 10.008 | 10.864 | 9.270 | 9.355 | 9.964 | 7.373 | 9.095 | 9.606 | 10.131 | 9.806 | 9.978 | 7.193 | 10.047 | 10.221 | 10.936 | 9.224 | 8.620 | 8.499 | 9.785 | 9.793 | 10.182 | 8.563 | 8.886 | 8.672 | 11.021 | 9.162 | 8.300 | 7.055 | 9.431 |
| SNRVVDLMAYMASKE | 9.290 | 10.199 | 10.504 | 11.153 | 8.696 | 10.754 | 5.734 | 9.529 | 8.927 | 8.043 | 10.758 | 9.280 | 9.483 | 10.699 | 10.444 | 9.612 | 10.901 | 11.486 | 10.171 | 8.610 | 10.652 | 10.585 | 10.367 | 9.739 | 9.737 | 8.430 | 9.978 | 9.825 | 9.796 | 9.998 | 8.982 | 11.020 |
| VKVGVNGF | 9.040 | 9.405 | 9.857 | 10.415 | 9.329 | 10.147 | 7.802 | 9.813 | 8.586 | 8.959 | 9.913 | 10.642 | 8.741 | 9.661 | 8.509 | 9.111 | 9.959 | 10.857 | 9.348 | 8.728 | 9.679 | 10.393 | 9.870 | 9.433 | 10.653 | 8.784 | 9.292 | 8.846 | 9.417 | 10.188 | 8.151 | 10.873 |
| VKVGVNGFGRIG | 9.227 | 10.254 | 9.448 | 9.835 | 8.691 | 8.966 | 7.128 | 9.302 | 9.389 | 10.201 | 10.147 | 8.848 | 8.699 | 9.297 | 10.052 | 8.338 | 9.584 | 10.946 | 9.327 | 8.901 | 9.484 | 9.683 | 9.513 | 9.419 | 9.947 | 8.483 | 9.300 | 9.534 | 8.519 | 10.116 | 8.812 | 10.175 |
| PHFLYPK | 10.374 | 9.111 | 7.961 | 10.005 | 8.579 | 9.600 | 10.410 | 10.202 | 10.033 | 8.874 | 10.198 | 9.369 | 9.306 | 8.638 | 9.776 | 9.854 | 9.658 | 9.154 | 10.222 | 9.163 | 8.725 | 9.530 | 8.501 | 8.740 | 10.362 | 9.807 | 8.170 | 10.468 | 8.673 | 9.659 | 10.054 | 9.643 |
| SQENPNTYSEDLDV | 11.483 | 10.616 | 10.050 | 12.010 | 12.613 | 11.935 | 10.158 | 11.263 | 11.976 | 11.171 | 11.932 | 13.312 | 12.395 | 12.294 | 12.102 | 11.517 | 10.683 | 10.951 | 11.766 | 10.762 | 11.655 | 11.080 | 9.450 | 12.068 | 12.745 | 10.020 | 12.157 | 11.799 | 11.276 | 11.821 | 10.941 | 12.268 |
| YGGFLRKYP | 9.811 | 10.332 | 7.065 | 9.245 | 9.511 | 9.567 | 10.319 | 9.383 | 11.561 | 9.243 | 9.979 | 10.062 | 8.153 | 8.993 | 10.152 | 9.251 | 9.093 | 9.201 | 10.766 | 9.278 | 8.825 | 9.391 | 8.972 | 8.684 | 9.316 | 9.002 | 8.676 | 10.121 | 8.921 | 9.983 | 9.937 | 9.328 |
| YGGFLRKYPK | 9.670 | 9.501 | 9.527 | 8.855 | 8.571 | 8.775 | 10.445 | 9.247 | 10.917 | 8.307 | 9.341 | 8.477 | 9.541 | 7.869 | 9.835 | 8.734 | 9.965 | 9.129 | 10.610 | 8.335 | 8.645 | 9.303 | 9.534 | 9.760 | 8.034 | 9.625 | 9.343 | 10.402 | 9.268 | 10.024 | 9.928 | 8.409 |
| YGGFLRRI | 10.039 | 10.401 | 10.044 | 9.478 | 9.071 | 9.132 | 9.998 | 9.620 | 9.298 | 9.630 | 9.590 | 9.547 | 9.277 | 7.665 | 9.539 | 9.275 | 9.205 | 9.444 | 10.499 | 9.635 | 8.697 | 9.633 | 9.319 | 9.071 | 9.097 | 9.240 | 8.999 | 9.961 | 9.175 | 9.991 | 10.483 | 9.981 |
| YGGFLRRQFKVVT | 10.415 | 11.126 | 10.274 | 7.495 | 10.082 | 9.522 | 10.459 | 9.417 | 10.562 | 9.363 | 9.479 | 9.379 | 8.588 | 6.814 | 9.700 | 9.205 | 9.249 | 9.307 | 10.716 | 9.433 | 8.992 | 10.557 | 9.319 | 9.320 | 9.913 | 9.304 | 9.351 | 10.445 | 9.381 | 10.357 | 10.499 | 9.260 |
| MDQLAKELT | 9.702 | 8.856 | 8.590 | 9.833 | 9.248 | 8.064 | 9.648 | 9.754 | 10.290 | 10.032 | 8.411 | 9.187 | 9.385 | 9.740 | 10.535 | 10.345 | 8.173 | 10.121 | 9.294 | 10.388 | 9.457 | 9.305 | 9.743 | 10.204 | 8.415 | 8.442 | 9.753 | 9.809 | 9.324 | 10.634 | 9.137 | 9.672 |
| MDQLAKELTAE | 9.430 | 10.127 | 9.460 | 10.240 | 9.647 | 10.058 | 10.102 | 9.859 | 10.683 | 10.227 | 9.178 | 9.679 | 8.906 | 9.828 | 10.424 | 10.147 | 10.305 | 9.380 | 12.062 | 10.872 | 10.118 | 9.737 | 9.841 | 8.736 | 10.000 | 9.988 | 9.887 | 9.309 | 9.451 | 11.010 | 10.650 | 10.859 |
| WSRMDQLAKELT | 9.254 | 9.684 | 8.691 | 9.921 | 10.288 | 8.488 | 10.740 | 9.585 | 10.545 | 10.747 | 8.310 | 9.236 | 9.935 | 10.082 | 11.088 | 10.391 | 9.387 | 10.736 | 8.559 | 9.965 | 9.801 | 9.202 | 10.080 | 10.288 | 9.727 | 8.894 | 9.944 | 8.829 | 9.964 | 10.830 | 9.988 | 9.004 |
| WSRMDQLAKELTAE | 10.576 | 10.117 | 10.259 | 10.796 | 10.406 | 9.845 | 11.433 | 10.469 | 11.401 | 11.233 | 9.697 | 9.565 | 11.024 | 10.493 | 11.709 | 10.744 | 7.958 | 10.939 | 10.491 | 11.001 | 10.945 | 9.970 | 10.607 | 10.566 | 10.749 | 10.573 | 10.524 | 10.104 | 10.478 | 11.600 | 11.776 | 9.987 |
| NQEQAEQGREHL | 9.888 | 9.637 | 7.969 | 10.143 | 10.229 | 7.774 | 10.162 | 8.135 | 10.664 | 10.212 | 9.088 | 8.712 | 9.694 | 10.674 | 10.807 | 10.837 | 8.465 | 10.451 | 8.603 | 9.848 | 11.302 | 7.242 | 10.916 | 11.972 | 9.383 | 9.394 | 10.523 | 8.738 | 9.143 | 9.565 | 8.422 | 9.395 |
| Q(-17.03)ELGKLTGPSNQ | 9.983 | 10.190 | 9.639 | 9.901 | 9.840 | 8.876 | 10.054 | 9.310 | 10.468 | 10.614 | 8.110 | 9.545 | 9.532 | 9.754 | 10.952 | 10.002 | 9.218 | 10.064 | 9.415 | 10.454 | 10.068 | 9.554 | 8.860 | 10.088 | 9.598 | 9.409 | 10.784 | 9.779 | 9.554 | 10.180 | 9.921 | 9.569 |
| YEENSRENPF | 10.210 | 9.409 | 9.681 | 9.335 | 9.732 | 8.421 | 10.084 | 10.389 | 11.745 | 10.688 | 9.797 | 10.822 | 8.245 | 8.699 | 9.843 | 9.056 | 8.268 | 10.241 | 10.125 | 9.793 | 10.218 | 9.777 | 9.468 | 9.856 | 9.991 | 8.834 | 10.266 | 9.815 | 9.908 | 10.889 | 10.720 | 10.551 |
| YKVNEYQGPVAPSGGFFLFRPRN(-.98) | 10.379 | 10.759 | 9.217 | 10.274 | 10.310 | 7.723 | 10.927 | 10.017 | 10.217 | 9.912 | 8.458 | 8.300 | 8.142 | 9.116 | 10.153 | 10.958 | 6.720 | 11.220 | 9.756 | 10.189 | 8.886 | 9.814 | 10.730 | 10.143 | 10.234 | 9.706 | 10.261 | 9.440 | 10.129 | 11.187 | 9.982 | 9.495 |
| Q(-17.03)EPGAPAAGM | 10.041 | 10.083 | 10.883 | 11.034 | 10.892 | 9.865 | 9.333 | 10.319 | 6.634 | 10.054 | 9.505 | 10.203 | 9.335 | 9.054 | 9.997 | 9.601 | 8.516 | 10.517 | 10.348 | 11.674 | 9.603 | 9.542 | 9.720 | 9.541 | 11.288 | 9.308 | 9.341 | 10.410 | 10.449 | 10.126 | 9.746 | 10.830 |
| Q(-17.03)EPGAPAAGM(+15.99) | 10.671 | 10.131 | 10.461 | 10.420 | 9.508 | 9.705 | 9.950 | 8.049 | 10.735 | 11.634 | 9.279 | 10.496 | 10.652 | 9.773 | 10.496 | 10.320 | 10.239 | 9.646 | 10.167 | 10.318 | 9.789 | 10.645 | 10.025 | 10.615 | 10.019 | 8.082 | 9.347 | 10.271 | 9.987 | 10.621 | 9.834 | 9.184 |
| A(+42.01)AYKLVLIRH | 9.220 | 10.393 | 9.878 | 9.891 | 8.033 | 10.339 | 9.692 | 9.767 | 9.283 | 10.096 | 9.335 | 8.548 | 8.769 | 8.189 | 9.977 | 8.407 | 9.603 | 9.881 | 8.517 | 8.310 | 9.500 | 9.336 | 9.428 | 8.144 | 8.833 | 9.973 | 9.944 | 9.155 | 9.204 | 9.245 | 8.465 | 8.614 |
| A(+42.01)AYKLVLIRHGE | 8.575 | 9.094 | 8.363 | 9.404 | 8.027 | 8.630 | 9.948 | 8.635 | 8.528 | 7.581 | 8.946 | 8.001 | 8.914 | 7.837 | 10.531 | 9.399 | 9.236 | 10.652 | 8.051 | 9.340 | 8.880 | 8.635 | 9.706 | 9.359 | 8.941 | 7.281 | 9.171 | 8.014 | 7.339 | 8.487 | 9.977 | 8.909 |
| SVNPYLQ(-.98) | 9.316 | 9.929 | 9.431 | 8.501 | 9.298 | 9.567 | 9.907 | 10.660 | 10.342 | 9.533 | 9.691 | 11.010 | 9.109 | 9.094 | 9.542 | 8.816 | 9.104 | 10.040 | 11.143 | 10.273 | 9.505 | 9.449 | 9.661 | 9.279 | 10.194 | 9.102 | 9.861 | 10.051 | 9.696 | 9.854 | 8.651 | 10.334 |
| SVNPYLQGKRLDNVV | 9.806 | 10.633 | 10.343 | 10.439 | 9.478 | 9.674 | 10.305 | 8.825 | 11.062 | 10.298 | 9.161 | 9.572 | 9.477 | 9.756 | 10.900 | 9.588 | 8.584 | 9.805 | 9.461 | 10.445 | 10.638 | 9.828 | 10.404 | 10.585 | 8.421 | 9.424 | 10.249 | 9.235 | 9.918 | 11.302 | 10.682 | 10.520 |
| SVNPYLQGKRLDNVVA | 10.065 | 10.015 | 10.235 | 10.252 | 9.164 | 9.938 | 10.248 | 9.840 | 10.995 | 10.097 | 9.181 | 10.031 | 9.497 | 9.504 | 10.600 | 9.558 | 9.069 | 9.988 | 10.329 | 9.980 | 10.271 | 10.081 | 9.628 | 9.970 | 9.989 | 9.933 | 9.982 | 9.899 | 9.699 | 10.261 | 10.925 | 9.867 |
| SVPHFSEEEKEPE | 10.435 | 8.977 | 10.152 | 10.200 | 8.703 | 9.006 | 10.225 | 8.646 | 10.746 | 9.462 | 9.817 | 11.170 | 10.664 | 10.007 | 10.327 | 9.003 | 10.148 | 10.148 | 10.391 | 11.113 | 10.218 | 9.076 | 9.467 | 9.624 | 9.355 | 9.450 | 10.179 | 10.267 | 9.656 | 10.507 | 10.065 | 10.189 |
| VPHFSEEEKEPE | 8.949 | 9.755 | 10.748 | 9.620 | 8.959 | 9.459 | 10.326 | 9.382 | 10.628 | 9.729 | 10.250 | 10.143 | 8.691 | 9.513 | 9.687 | 8.412 | 10.847 | 9.756 | 10.799 | 11.015 | 8.802 | 10.869 | 10.053 | 9.738 | 10.203 | 9.028 | 10.171 | 9.291 | 9.537 | 10.725 | 9.922 | 10.246 |
| IKMALQQEGFD | 10.327 | 9.935 | 8.989 | 13.103 | 5.635 | 9.904 | 9.992 | 10.784 | 9.780 | 9.551 | 9.799 | 9.524 | 8.067 | 9.794 | 9.691 | 9.946 | 9.405 | 8.456 | 9.996 | 9.824 | 8.557 | 9.317 | 7.672 | 8.333 | 9.905 | 9.569 | 8.454 | 10.038 | 9.807 | 10.055 | 9.662 | 10.468 |
| PMFIVNTNVPRA | 9.481 | 9.944 | 9.483 | 10.555 | 9.247 | 9.369 | 6.179 | 10.439 | 7.868 | 7.924 | 10.364 | 9.962 | 9.344 | 9.218 | 11.289 | 11.187 | 10.799 | 11.324 | 8.532 | 10.137 | 9.828 | 10.490 | 6.809 | 10.004 | 9.592 | 10.258 | 9.451 | 10.798 | 8.578 | 8.643 | 10.481 | 8.817 |
| TAYAIYMLAMAAFPKKQN | 9.792 | 9.406 | 11.493 | 10.320 | 10.771 | 9.617 | 9.039 | 10.464 | 9.754 | 10.713 | 10.137 | 10.545 | 10.015 | 11.646 | 7.452 | 11.557 | 10.504 | 8.267 | 10.426 | 10.208 | 10.575 | 10.732 | 10.753 | 10.709 | 11.385 | 9.482 | 10.352 | 11.849 | 10.172 | 9.396 | 11.222 | 11.059 |
| SAVISLEGKPL | 9.283 | 9.869 | 9.291 | 10.359 | 10.551 | 9.979 | 9.846 | 10.500 | 7.133 | 10.369 | 9.263 | 8.640 | 9.559 | 8.653 | 9.858 | 10.120 | 9.636 | 10.569 | 8.604 | 9.256 | 9.519 | 9.339 | 9.188 | 9.136 | 9.838 | 9.759 | 9.802 | 8.342 | 8.695 | 8.345 | 10.111 | 9.771 |
| FPKPEGSQD | 9.654 | 8.779 | 9.914 | 8.708 | 9.827 | 9.702 | 10.265 | 9.373 | 10.370 | 10.448 | 9.344 | 9.130 | 10.228 | 9.890 | 10.010 | 10.465 | 10.584 | 7.681 | 9.477 | 10.459 | 9.565 | 9.617 | 9.922 | 9.907 | 7.459 | 9.959 | 10.392 | 8.890 | 9.927 | 10.213 | 9.499 | 9.472 |
| FPKPEGSQDKSLHN | 9.592 | 8.801 | 11.084 | 10.049 | 10.067 | 9.452 | 9.211 | 9.262 | 6.576 | 8.797 | 9.462 | 8.082 | 11.133 | 8.716 | 9.588 | 10.025 | 10.738 | 10.246 | 9.346 | 9.741 | 9.776 | 9.091 | 10.460 | 9.892 | 8.730 | 10.256 | 9.557 | 9.493 | 9.640 | 9.342 | 9.099 | 9.414 |
| SLKPEFVDIINAKQ | 9.077 | 10.636 | 9.445 | 10.803 | 9.309 | 9.707 | 10.295 | 11.267 | 9.044 | 11.213 | 9.422 | 8.791 | 9.433 | 9.779 | 10.141 | 9.289 | 10.885 | 11.479 | 8.863 | 8.231 | 9.530 | 10.061 | 10.711 | 10.404 | 10.488 | 8.683 | 9.593 | 9.515 | 10.980 | 9.407 | 7.075 | 9.892 |
| GRTLYGFGG | 9.052 | 9.920 | 10.032 | 9.646 | 9.098 | 10.417 | 10.069 | 9.619 | 9.561 | 8.770 | 10.276 | 9.455 | 8.697 | 9.161 | 8.266 | 9.257 | 9.647 | 8.008 | 9.097 | 8.557 | 9.280 | 9.673 | 9.131 | 9.580 | 9.715 | 9.191 | 9.742 | 9.252 | 9.889 | 9.229 | 9.521 | 9.495 |
| RTLYGFGG | 8.993 | 9.236 | 10.180 | 9.835 | 9.690 | 10.084 | 8.359 | 9.578 | 8.694 | 9.629 | 10.465 | 9.207 | 8.581 | 9.467 | 8.280 | 8.330 | 9.869 | 7.764 | 8.541 | 8.058 | 9.230 | 9.574 | 9.093 | 9.933 | 9.996 | 9.116 | 9.000 | 8.950 | 9.963 | 9.208 | 9.572 | 10.310 |
| TLYGFGG | 7.745 | 8.325 | 7.751 | 9.127 | 9.166 | 8.564 | 8.950 | 9.439 | 8.993 | 9.464 | 9.263 | 8.478 | 7.874 | 8.975 | 8.284 | 8.538 | 8.598 | 9.068 | 9.397 | 8.580 | 9.263 | 9.246 | 8.188 | 8.461 | 9.708 | 8.310 | 8.462 | 8.634 | 8.586 | 8.817 | 8.243 | 9.564 |
| MQIFVKTL | 9.379 | 10.609 | 9.643 | 10.331 | 8.209 | 10.703 | 9.397 | 10.384 | 9.270 | 9.995 | 10.246 | 9.456 | 8.145 | 8.989 | 8.272 | 9.575 | 8.781 | 8.208 | 9.522 | 8.393 | 9.359 | 9.689 | 8.624 | 9.317 | 8.943 | 8.181 | 9.577 | 8.985 | 9.928 | 8.951 | 8.676 | 10.166 |
| LLRALASSNARAQQ | 10.354 | 9.205 | 7.363 | 10.050 | 9.867 | 9.814 | 10.518 | 9.468 | 10.899 | 8.767 | 9.818 | 10.555 | 9.604 | 10.244 | 10.777 | 9.981 | 9.595 | 9.476 | 10.328 | 10.529 | 9.176 | 9.238 | 9.006 | 9.656 | 9.852 | 10.214 | 8.716 | 10.093 | 9.062 | 10.415 | 10.148 | 9.609 |
| AVDQDLGPEVPPENVL(-.98) | 10.191 | 10.630 | 10.364 | 10.961 | 11.557 | 10.420 | 10.447 | 11.239 | 11.178 | 11.865 | 9.808 | 10.830 | 10.599 | 11.273 | 11.504 | 11.311 | 8.906 | 10.232 | 10.564 | 11.144 | 11.528 | 10.372 | 9.851 | 11.320 | 10.775 | 9.887 | 11.536 | 10.431 | 11.240 | 11.429 | 10.841 | 11.307 |
| LENSSPQAPA | 9.115 | 9.447 | 8.900 | 8.364 | 10.099 | 9.508 | 9.884 | 9.022 | 10.681 | 9.519 | 8.722 | 10.222 | 10.120 | 9.965 | 10.939 | 9.870 | 10.099 | 9.683 | 10.315 | 10.974 | 10.091 | 9.933 | 9.989 | 10.328 | 7.969 | 9.925 | 9.785 | 9.600 | 9.287 | 9.659 | 8.710 | 9.670 |
| LENSSPQAPARRLLPP | 9.925 | 10.410 | 9.632 | 7.370 | 9.526 | 8.733 | 9.912 | 9.415 | 11.461 | 9.732 | 9.054 | 9.678 | 7.942 | 9.083 | 10.590 | 9.212 | 9.005 | 9.556 | 9.727 | 11.540 | 9.812 | 9.584 | 10.048 | 10.076 | 9.574 | 9.656 | 9.828 | 9.491 | 9.040 | 10.461 | 10.478 | 9.630 |
| SLSAASAPLAETSTPL | 10.116 | 10.138 | 10.111 | 10.044 | 10.696 | 10.363 | 10.242 | 10.498 | 10.845 | 10.426 | 9.597 | 11.202 | 10.197 | 10.455 | 11.410 | 10.261 | 9.498 | 10.337 | 10.317 | 11.138 | 10.607 | 10.169 | 10.059 | 10.455 | 10.544 | 9.901 | 10.491 | 9.999 | 10.596 | 10.888 | 10.806 | 10.581 |
| SLSAASAPLAETSTPLRL | 10.764 | 10.153 | 9.825 | 9.518 | 10.885 | 10.351 | 10.018 | 10.858 | 11.520 | 11.399 | 9.349 | 11.506 | 9.557 | 9.433 | 11.059 | 9.954 | 9.811 | 10.124 | 10.658 | 9.704 | 10.572 | 10.129 | 10.022 | 9.671 | 11.024 | 9.907 | 10.099 | 10.255 | 10.527 | 10.682 | 11.097 | 10.351 |
| SSEPEAAPAPRRL | 9.898 | 9.141 | 8.506 | 8.878 | 10.266 | 8.494 | 10.181 | 9.843 | 9.421 | 8.893 | 9.145 | 8.740 | 9.860 | 9.658 | 9.716 | 9.958 | 9.581 | 9.679 | 9.054 | 9.896 | 9.359 | 8.275 | 10.350 | 10.357 | 8.308 | 9.462 | 9.900 | 9.708 | 9.220 | 10.293 | 8.972 | 9.980 |
EigenMS removes sample-to-sample variability.
Univariate analysis
Univariate statistic analysis will proceed for each pairs of comparison. For each pair,
Step 1, differential analysis;
t-test
Wilcoxon rank-sum test
For all statistical tests, the Benjamini-Hochberg (BH) procedure was applied to correct for multiple hypothesis testing.
Step 2, fold change, both linear and log2;
Step 3, regulation shown in volcano plot.
A feature is considered unregulated when
FC(log2)> 0.6 (orFC(lin)> 1.5);A feature is considered downregulated when
FC(log2)< -0.6 (orFC(lin)< -1.5).
d5 <- rbind.data.frame(labels_d1, norm_d1_mod)
d5_mod <- t(d5) %>%
as.data.frame(.) %>%
rownames_to_column(., var = "rowname") %>%
as_tibble() %>%
dplyr::rename(., Label = class) %>%
mutate(across(-c(Label,rowname), as.numeric)) %>%
#rename_with(str_trim)
column_to_rownames(., var = "rowname")
#colnames(d5_mod)[-1] == feature_name$variable
colnames(d5_mod)[-1] = feature_name$name
grps = as.factor(t(labels_d1))
trt= levels(grps)
combo_list = do.call("c", lapply(seq_along(time), function(i) combn(trt, 2, FUN = list))) # top 10 are unique combo
#combo_list = combo_list[1:10]
feature_meta = read.csv(file = "data/feature_meta.csv")contrast = combo_list[[1]]
df = d5_mod %>%
dplyr::filter(., Label %in% contrast ) %>%
droplevels()
temp_d <- df %>%
mutate(across(-Label, ~ 2^(.) )) %>% # d3_mod is log-scale number, this step will de-log and change data back to linear number
group_by(Label) %>%
summarise(across(everything(), mean))
print(paste("Order of Fold Change:", temp_d$Label[1], "over", temp_d$Label[2], sep = " "))[1] "Order of Fold Change: Iso over No"
uni_res <- do_univariate(df, order = c("No", "Iso"))
uni_res <- uni_res %>%
rowwise() %>%
mutate(padj = min(c(BHT, BHW))) %>%
# get the lowest padj
ungroup() %>%
mutate(`-log10padj` = -log10(padj))
uni_res_annotation = uni_res %>% left_join(., feature_meta, by = c("variable" = "Peptide"))
uni_res_annotation %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")| variable | pT | BHT | pW | BHW | FC(lin) | FC(log2) | padj | -log10padj | Accession | org_peptide_name |
|---|---|---|---|---|---|---|---|---|---|---|
| A(+42.01)AYKLVLIRH | 0.697 | 0.853 | 0.809 | 0.897 | 1.087 | 0.121 | 0.853 | 0.069 | P25113|PGAM1_RAT | A(+42.01)AYKLVLIRH |
| A(+42.01)AYKLVLIRHGE | 0.703 | 0.853 | 1.000 | 1.000 | 1.262 | 0.335 | 0.853 | 0.069 | P25113|PGAM1_RAT | A(+42.01)AYKLVLIRHGE |
| AAFQKVVAGVASALAHKYH | 0.520 | 0.714 | 0.756 | 0.874 | 0.905 | -0.143 | 0.714 | 0.146 | P02091|HBB1_RAT:P11517|HBB2_RAT | AAFQKVVAGVASALAHKYH |
| AEAFPLEF | 0.386 | 0.621 | 0.468 | 0.704 | 1.307 | 0.386 | 0.621 | 0.207 | P01194|COLI_RAT | AEAFPLEF |
| AEEETAGGDGRPEPSP | 0.982 | 0.982 | 0.705 | 0.869 | 1.144 | 0.194 | 0.869 | 0.061 | P01194|COLI_RAT | AEEETAGGDGRPEPSP |
| AEEETAGGDGRPEPSPR | 0.496 | 0.695 | 0.512 | 0.730 | 0.868 | -0.204 | 0.695 | 0.158 | P01194|COLI_RAT | AEEETAGGDGRPEPSPR |
| AEEETAGGDGRPEPSPRE(-.98) | 0.589 | 0.767 | 0.512 | 0.730 | 0.965 | -0.051 | 0.730 | 0.137 | P01194|COLI_RAT | AEEETAGGDGRPEPSPRE(-.98) |
| AFQKVVAGVASALAHKYH | 0.757 | 0.868 | 0.918 | 0.959 | 0.967 | -0.048 | 0.868 | 0.062 | P02091|HBB1_RAT:P11517|HBB2_RAT | AFQKVVAGVASALAHKYH |
| AGTQESVDSAKP | 0.476 | 0.680 | 0.152 | 0.361 | 1.397 | 0.483 | 0.361 | 0.443 | P01186|NEU2_RAT | AGTQESVDSAKP |
| AGTQESVDSAKPRVY | 0.562 | 0.744 | 0.756 | 0.874 | 0.976 | -0.035 | 0.744 | 0.129 | P01186|NEU2_RAT | AGTQESVDSAKPRVY |
| AKVAVLGA | 0.224 | 0.466 | 0.349 | 0.603 | 0.817 | -0.291 | 0.466 | 0.331 | P04636|MDHM_RAT | AKVAVLGA |
| AQAAFQKVVAGVASALAHKYH | 0.714 | 0.860 | 0.973 | 0.985 | 0.877 | -0.189 | 0.860 | 0.066 | P02091|HBB1_RAT:P11517|HBB2_RAT | AQAAFQKVVAGVASALAHKYH |
| ASALAHKYH | 0.523 | 0.714 | 0.756 | 0.874 | 1.203 | 0.267 | 0.714 | 0.146 | P02091|HBB1_RAT:P11517|HBB2_RAT | ASALAHKYH |
| ASLDKFLASVSTVLTSKYR | 0.165 | 0.370 | 0.173 | 0.384 | 0.500 | -0.999 | 0.370 | 0.432 | P01946|HBA_RAT | ASLDKFLASVSTVLTSKYR |
| AVDQDLGPEVPPENVL(-.98) | 0.775 | 0.869 | 0.197 | 0.420 | 0.881 | -0.182 | 0.420 | 0.377 | Q9QXU9|PCS1N_RAT | AVDQDLGPEVPPENVL(-.98) |
| DEGHDPVHESPVDTA | 0.040 | 0.171 | 0.061 | 0.208 | 1.611 | 0.688 | 0.171 | 0.767 | O35314|SCG1_RAT | DEGHDPVHESPVDTA |
| DPVHESPVDT | 0.849 | 0.914 | 0.756 | 0.874 | 0.929 | -0.106 | 0.874 | 0.059 | O35314|SCG1_RAT | DPVHESPVDT |
| DPVHESPVDTA | 0.531 | 0.714 | 0.605 | 0.806 | 1.107 | 0.146 | 0.714 | 0.146 | O35314|SCG1_RAT | DPVHESPVDTA |
| EAFPLEF | 0.687 | 0.847 | 0.605 | 0.806 | 0.971 | -0.042 | 0.806 | 0.093 | P01194|COLI_RAT | EAFPLEF |
| EEETAGGDGRPEPSPRE(-.98) | 0.256 | 0.507 | 0.132 | 0.355 | 0.888 | -0.171 | 0.355 | 0.450 | P01194|COLI_RAT | EEETAGGDGRPEPSPRE(-.98) |
| EETAGGDGRPEPSPRE(-.98) | 0.074 | 0.249 | 0.036 | 0.150 | 0.475 | -1.075 | 0.150 | 0.824 | P01194|COLI_RAT | EETAGGDGRPEPSPRE(-.98) |
| EGFFRLT | 0.083 | 0.259 | 0.061 | 0.208 | 0.734 | -0.446 | 0.208 | 0.681 | P01186|NEU2_RAT | EGFFRLT |
| ELDQLLHY | 0.875 | 0.921 | 0.809 | 0.897 | 0.971 | -0.042 | 0.897 | 0.047 | O35314|SCG1_RAT | ELDQLLHY |
| ELEGEQPD | 0.746 | 0.867 | 0.863 | 0.931 | 1.039 | 0.055 | 0.867 | 0.062 | P01194|COLI_RAT | ELEGEQPD |
| ESVDSAKPRVY | 0.087 | 0.259 | 0.085 | 0.262 | 0.590 | -0.762 | 0.259 | 0.587 | P01186|NEU2_RAT | ESVDSAKPRVY |
| F(+42.01)PAMPLSSLFANAVLRAQHLH | 0.751 | 0.867 | 0.973 | 0.985 | 0.843 | -0.246 | 0.867 | 0.062 | P01244|SOMA_RAT | F(+42.01)PAMPLSSLFANAVLRAQHLH |
| FLASVSTVLTSKYR | 0.542 | 0.723 | 0.705 | 0.869 | 0.905 | -0.144 | 0.723 | 0.141 | P01946|HBA_RAT | FLASVSTVLTSKYR |
| FMTSEKSQTP | 0.532 | 0.714 | 0.468 | 0.704 | 1.257 | 0.330 | 0.704 | 0.152 | P01194|COLI_RAT | FMTSEKSQTP |
| FNPYFDPL | 0.876 | 0.921 | 0.654 | 0.838 | 0.896 | -0.159 | 0.838 | 0.077 | O35314|SCG1_RAT | FNPYFDPL |
| FPAM(+15.99)PLSSLFANAVLR | 0.084 | 0.259 | 0.173 | 0.384 | 0.503 | -0.992 | 0.259 | 0.587 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLR |
| FPAM(+15.99)PLSSLFANAVLRAQH | 0.086 | 0.259 | 0.173 | 0.384 | 0.606 | -0.723 | 0.259 | 0.587 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLRAQH |
| FPAM(+15.99)PLSSLFANAVLRAQHLH | 0.025 | 0.127 | 0.051 | 0.196 | 0.483 | -1.051 | 0.127 | 0.897 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLRAQHLH |
| FPAMPLS | 0.225 | 0.466 | 0.152 | 0.361 | 0.749 | -0.417 | 0.361 | 0.443 | P01244|SOMA_RAT | FPAMPLS |
| FPAMPLSS | 0.148 | 0.344 | 0.114 | 0.324 | 0.808 | -0.308 | 0.324 | 0.490 | P01244|SOMA_RAT | FPAMPLSS |
| FPAMPLSSL | 0.015 | 0.088 | 0.010 | 0.072 | 0.623 | -0.683 | 0.072 | 1.143 | P01244|SOMA_RAT | FPAMPLSSL |
| FPAMPLSSLF | 0.000 | 0.006 | 0.001 | 0.011 | 0.405 | -1.305 | 0.006 | 2.207 | P01244|SOMA_RAT | FPAMPLSSLF |
| FPAMPLSSLFA | 0.000 | 0.006 | 0.001 | 0.011 | 0.205 | -2.286 | 0.006 | 2.207 | P01244|SOMA_RAT | FPAMPLSSLFA |
| FPAMPLSSLFAN | 0.000 | 0.006 | 0.000 | 0.006 | 0.240 | -2.058 | 0.006 | 2.253 | P01244|SOMA_RAT | FPAMPLSSLFAN |
| FPAMPLSSLFANA | 0.001 | 0.020 | 0.002 | 0.026 | 0.238 | -2.073 | 0.020 | 1.694 | P01244|SOMA_RAT | FPAMPLSSLFANA |
| FPAMPLSSLFANAVLR | 0.000 | 0.003 | 0.000 | 0.002 | 0.225 | -2.151 | 0.002 | 2.731 | P01244|SOMA_RAT | FPAMPLSSLFANAVLR |
| FPAMPLSSLFANAVLRA | 0.001 | 0.014 | 0.001 | 0.016 | 0.306 | -1.708 | 0.014 | 1.852 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRA |
| FPAMPLSSLFANAVLRAQ | 0.013 | 0.083 | 0.016 | 0.100 | 0.489 | -1.031 | 0.083 | 1.080 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQ |
| FPAMPLSSLFANAVLRAQH | 0.000 | 0.000 | 0.000 | 0.001 | 0.303 | -1.722 | 0.000 | 3.817 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQH |
| FPAMPLSSLFANAVLRAQHLH | 0.000 | 0.002 | 0.000 | 0.004 | 0.406 | -1.299 | 0.002 | 2.652 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLH |
| FPAMPLSSLFANAVLRAQHLHQ | 0.000 | 0.002 | 0.000 | 0.006 | 0.459 | -1.122 | 0.002 | 2.652 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQ |
| FPAMPLSSLFANAVLRAQHLHQL | 0.008 | 0.070 | 0.008 | 0.059 | 0.387 | -1.370 | 0.059 | 1.227 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQL |
| FPAMPLSSLFANAVLRAQHLHQLA | 0.002 | 0.030 | 0.003 | 0.030 | 0.375 | -1.414 | 0.030 | 1.525 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLA |
| FPAMPLSSLFANAVLRAQHLHQLAAD | 0.001 | 0.023 | 0.002 | 0.026 | 0.391 | -1.356 | 0.023 | 1.646 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLAAD |
| FPKPEGSQD | 0.962 | 0.982 | 0.918 | 0.959 | 1.012 | 0.018 | 0.959 | 0.018 | P47868|SCG3_RAT | FPKPEGSQD |
| FPKPEGSQDKSLHN | 0.120 | 0.323 | 0.072 | 0.232 | 0.796 | -0.329 | 0.232 | 0.635 | P47868|SCG3_RAT | FPKPEGSQDKSLHN |
| GPNLVARSKEALA | 0.149 | 0.344 | 0.152 | 0.361 | 0.677 | -0.564 | 0.344 | 0.464 | P02770|ALBU_RAT | GPNLVARSKEALA |
| GPVQFLSRIF | 0.012 | 0.081 | 0.008 | 0.059 | 1.946 | 0.960 | 0.059 | 1.227 | P01244|SOMA_RAT | GPVQFLSRIF |
| GPYRVEHF | 0.067 | 0.245 | 0.043 | 0.168 | 1.394 | 0.479 | 0.168 | 0.775 | P01194|COLI_RAT | GPYRVEHF |
| GPYRVEHFRWGNPPKD | 0.334 | 0.589 | 0.314 | 0.560 | 1.536 | 0.619 | 0.560 | 0.252 | P01194|COLI_RAT | GPYRVEHFRWGNPPKD |
| GRGREPGAYPALDSRQE | 0.600 | 0.774 | 0.654 | 0.838 | 1.156 | 0.209 | 0.774 | 0.111 | O35314|SCG1_RAT | GRGREPGAYPALDSRQE |
| GRTLYGFGG | 0.044 | 0.186 | 0.036 | 0.150 | 0.772 | -0.374 | 0.150 | 0.824 | P62804|H4_RAT | GRTLYGFGG |
| GTQESVDSAKPRVY | 0.271 | 0.517 | 0.349 | 0.603 | 0.899 | -0.154 | 0.517 | 0.286 | P01186|NEU2_RAT | GTQESVDSAKPRVY |
| GVASALAHKYH | 0.021 | 0.117 | 0.043 | 0.168 | 0.540 | -0.888 | 0.117 | 0.933 | P02091|HBB1_RAT:P11517|HBB2_RAT | GVASALAHKYH |
| IKMALQQEGFD | 0.445 | 0.669 | 0.973 | 0.985 | 1.028 | 0.040 | 0.669 | 0.175 | P28841|NEC2_RAT | IKMALQQEGFD |
| KYVMGHF | 0.782 | 0.869 | 0.756 | 0.874 | 1.079 | 0.110 | 0.869 | 0.061 | P01194|COLI_RAT | KYVMGHF |
| KYVMGHFRWD | 0.202 | 0.437 | 0.282 | 0.531 | 1.391 | 0.476 | 0.437 | 0.360 | P01194|COLI_RAT | KYVMGHFRWD |
| LDEGHDPV | 0.009 | 0.071 | 0.020 | 0.104 | 1.532 | 0.615 | 0.071 | 1.147 | O35314|SCG1_RAT | LDEGHDPV |
| LDEGHDPVHESPV | 0.002 | 0.023 | 0.000 | 0.007 | 2.336 | 1.224 | 0.007 | 2.156 | O35314|SCG1_RAT | LDEGHDPVHESPV |
| LENSSPQAPA | 0.256 | 0.507 | 0.282 | 0.531 | 1.320 | 0.401 | 0.507 | 0.295 | Q9QXU9|PCS1N_RAT | LENSSPQAPA |
| LENSSPQAPARRLLPP | 0.142 | 0.340 | 0.061 | 0.208 | 1.660 | 0.731 | 0.208 | 0.681 | Q9QXU9|PCS1N_RAT | LENSSPQAPARRLLPP |
| LLDEGHDPVHESPVD | 0.157 | 0.358 | 0.020 | 0.104 | 1.472 | 0.558 | 0.104 | 0.983 | O35314|SCG1_RAT | LLDEGHDPVHESPVD |
| LLDEGHDPVHESPVDT | 0.479 | 0.680 | 0.314 | 0.560 | 1.220 | 0.287 | 0.560 | 0.252 | O35314|SCG1_RAT | LLDEGHDPVHESPVDT |
| LLDEGHDPVHESPVDTA | 0.002 | 0.025 | 0.001 | 0.016 | 1.855 | 0.891 | 0.016 | 1.785 | O35314|SCG1_RAT | LLDEGHDPVHESPVDTA |
| LLRALASSNARAQQ | 0.019 | 0.106 | 0.013 | 0.083 | 1.532 | 0.616 | 0.083 | 1.079 | Q792G6|GNAS3_RAT | LLRALASSNARAQQ |
| LPGLLLF | 0.074 | 0.249 | 0.085 | 0.262 | 0.561 | -0.833 | 0.249 | 0.604 | P01230|LSHB_RAT | LPGLLLF |
| LPHLPGLLLF | 0.051 | 0.206 | 0.036 | 0.150 | 0.479 | -1.061 | 0.150 | 0.824 | P01230|LSHB_RAT | LPHLPGLLLF |
| LVQLAGTQESVDSAKPRVY | 0.390 | 0.621 | 0.387 | 0.634 | 1.442 | 0.528 | 0.621 | 0.207 | P01186|NEU2_RAT | LVQLAGTQESVDSAKPRVY |
| MDQLAKELT | 0.419 | 0.648 | 0.654 | 0.838 | 1.102 | 0.140 | 0.648 | 0.188 | P10354|CMGA_RAT | MDQLAKELT |
| MDQLAKELTAE | 0.428 | 0.655 | 0.557 | 0.781 | 1.313 | 0.393 | 0.655 | 0.183 | P10354|CMGA_RAT | MDQLAKELTAE |
| MQIFVKTL | 0.137 | 0.340 | 0.197 | 0.420 | 0.715 | -0.485 | 0.340 | 0.468 | P62982|RS27A_RAT:P62986|RL40_RAT:P0CG51|UBB_RAT:Q63429|UBC_RAT | MQIFVKTL |
| NPYFDPLQWKNSDFE | 0.317 | 0.578 | 0.223 | 0.463 | 0.751 | -0.413 | 0.463 | 0.334 | O35314|SCG1_RAT | NPYFDPLQWKNSDFE |
| NQEQAEQGREHL | 0.678 | 0.842 | 0.809 | 0.897 | 0.715 | -0.484 | 0.842 | 0.075 | P10362|SCG2_RAT | NQEQAEQGREHL |
| PESAFSE | 0.134 | 0.340 | 0.114 | 0.324 | 1.317 | 0.397 | 0.324 | 0.490 | P01179|NEU1_RAT | PESAFSE |
| PHFLYPK | 0.123 | 0.325 | 0.099 | 0.294 | 1.317 | 0.397 | 0.294 | 0.532 | P05371|CLUS_RAT | PHFLYPK |
| PMFIVNTNVPRA | 0.354 | 0.605 | 0.512 | 0.730 | 0.868 | -0.204 | 0.605 | 0.219 | P30904|MIF_RAT | PMFIVNTNVPRA |
| PVHESPVDTA | 0.009 | 0.073 | 0.006 | 0.059 | 1.587 | 0.666 | 0.059 | 1.227 | O35314|SCG1_RAT | PVHESPVDTA |
| PVQFLSRIF | 0.335 | 0.589 | 0.387 | 0.634 | 1.399 | 0.485 | 0.589 | 0.230 | P01244|SOMA_RAT | PVQFLSRIF |
| Q(-17.03)ELGKLTGPSNQ | 0.073 | 0.249 | 0.223 | 0.463 | 1.368 | 0.452 | 0.249 | 0.604 | P10362|SCG2_RAT | Q(-17.03)ELGKLTGPSNQ |
| Q(-17.03)EPGAPAAGM | 0.750 | 0.867 | 0.863 | 0.931 | 1.042 | 0.059 | 0.867 | 0.062 | P15087|CBPE_RAT | Q(-17.03)EPGAPAAGM |
| Q(-17.03)EPGAPAAGM(+15.99) | 0.026 | 0.128 | 0.029 | 0.142 | 1.549 | 0.632 | 0.128 | 0.892 | P15087|CBPE_RAT | Q(-17.03)EPGAPAAGM(+15.99) |
| Q(-17.03)KIAEKFSQ | 0.101 | 0.292 | 0.114 | 0.324 | 1.524 | 0.608 | 0.292 | 0.535 | O35314|SCG1_RAT | Q(-17.03)KIAEKFSQ |
| Q(-17.03)KIAEKFSQR(-.98) | 0.011 | 0.074 | 0.008 | 0.059 | 1.510 | 0.595 | 0.059 | 1.227 | O35314|SCG1_RAT | Q(-17.03)KIAEKFSQR(-.98) |
| QAAFQKVVAGVASALAHKYH | 0.785 | 0.869 | 0.705 | 0.869 | 1.083 | 0.115 | 0.869 | 0.061 | P02091|HBB1_RAT:P11517|HBB2_RAT | QAAFQKVVAGVASALAHKYH |
| R(+42.01)PVKVYPNVAENESAEAFPLEF | 0.291 | 0.542 | 0.282 | 0.531 | 1.400 | 0.486 | 0.531 | 0.275 | P01194|COLI_RAT | R(+42.01)PVKVYPNVAENESAEAFPLEF |
| RAEEETAGGDGRPEPSPRE(-.98) | 0.851 | 0.914 | 0.918 | 0.959 | 1.235 | 0.304 | 0.914 | 0.039 | P01194|COLI_RAT | RAEEETAGGDGRPEPSPRE(-.98) |
| RPVKVYPNVAENE | 0.224 | 0.466 | 0.282 | 0.531 | 1.518 | 0.602 | 0.466 | 0.331 | P01194|COLI_RAT | RPVKVYPNVAENE |
| RPVKVYPNVAENES(+79.97)AEAFPLE | 0.460 | 0.676 | 0.512 | 0.730 | 0.935 | -0.097 | 0.676 | 0.170 | P01194|COLI_RAT | RPVKVYPNVAENES(+79.97)AEAFPLE |
| RPVKVYPNVAENES(+79.97)AEAFPLEF | 0.025 | 0.127 | 0.043 | 0.168 | 0.487 | -1.039 | 0.127 | 0.897 | P01194|COLI_RAT | RPVKVYPNVAENES(+79.97)AEAFPLEF |
| RPVKVYPNVAENESAEAFPLE | 0.135 | 0.340 | 0.314 | 0.560 | 1.375 | 0.459 | 0.340 | 0.468 | P01194|COLI_RAT | RPVKVYPNVAENESAEAFPLE |
| RPVKVYPNVAENESAEAFPLEF | 0.723 | 0.860 | 0.426 | 0.679 | 0.918 | -0.124 | 0.679 | 0.168 | P01194|COLI_RAT | RPVKVYPNVAENESAEAFPLEF |
| RRPVKVYPNVAENESAEAFPLEF | 0.661 | 0.828 | 0.809 | 0.897 | 1.030 | 0.043 | 0.828 | 0.082 | P01194|COLI_RAT | RRPVKVYPNVAENESAEAFPLEF |
| RTLYGFGG | 0.003 | 0.036 | 0.003 | 0.030 | 0.546 | -0.873 | 0.030 | 1.520 | P62804|H4_RAT | RTLYGFGG |
| S(+42.01)MEHFRWGKPV(-.98) | 0.374 | 0.618 | 0.512 | 0.730 | 1.461 | 0.547 | 0.618 | 0.209 | P01194|COLI_RAT | S(+42.01)MEHFRWGKPV(-.98) |
| S(+42.01)YSMEHF | 0.299 | 0.552 | 0.282 | 0.531 | 0.881 | -0.182 | 0.531 | 0.275 | P01194|COLI_RAT | S(+42.01)YSMEHF |
| S(+42.01)YSMEHFRWGKPV(-.98) | 0.652 | 0.828 | 0.705 | 0.869 | 0.941 | -0.088 | 0.828 | 0.082 | P01194|COLI_RAT | S(+42.01)YSMEHFRWGKPV(-.98) |
| SAEAFPLEF | 0.970 | 0.982 | 1.000 | 1.000 | 0.926 | -0.111 | 0.982 | 0.008 | P01194|COLI_RAT | SAEAFPLEF |
| SAVISLEGKPL | 0.321 | 0.579 | 0.426 | 0.679 | 0.816 | -0.294 | 0.579 | 0.238 | P45592|COF1_RAT | SAVISLEGKPL |
| SEES(+79.97)QEKEY | 0.936 | 0.971 | 0.918 | 0.959 | 0.980 | -0.030 | 0.959 | 0.018 | O35314|SCG1_RAT | SEES(+79.97)QEKEY |
| SLDKFLA | 0.913 | 0.954 | 0.973 | 0.985 | 0.684 | -0.547 | 0.954 | 0.021 | P01946|HBA_RAT | SLDKFLA |
| SLDKFLASVSTVLTSKYR | 0.263 | 0.507 | 0.251 | 0.509 | 0.757 | -0.402 | 0.507 | 0.295 | P01946|HBA_RAT | SLDKFLASVSTVLTSKYR |
| SLKPEFVDIINAKQ | 0.069 | 0.247 | 0.072 | 0.232 | 0.649 | -0.624 | 0.232 | 0.635 | P48500|TPIS_RAT | SLKPEFVDIINAKQ |
| SLSAASAPLAETSTPL | 0.260 | 0.507 | 0.654 | 0.838 | 1.197 | 0.260 | 0.507 | 0.295 | Q9QXU9|PCS1N_RAT | SLSAASAPLAETSTPL |
| SLSAASAPLAETSTPLRL | 0.142 | 0.340 | 0.152 | 0.361 | 1.398 | 0.484 | 0.340 | 0.468 | Q9QXU9|PCS1N_RAT | SLSAASAPLAETSTPLRL |
| SMEHFRWGKPV(-.98) | 0.028 | 0.130 | 0.024 | 0.124 | 1.941 | 0.957 | 0.124 | 0.907 | P01194|COLI_RAT | SMEHFRWGKPV(-.98) |
| SNRVVDLMAYMASKE | 0.028 | 0.130 | 0.020 | 0.104 | 0.538 | -0.895 | 0.104 | 0.983 | P04797|G3P_RAT | SNRVVDLMAYMASKE |
| SPRIGQILK | 0.436 | 0.662 | 0.387 | 0.634 | 0.822 | -0.283 | 0.634 | 0.198 | P01244|SOMA_RAT | SPRIGQILK |
| SPRIGQILKQ | 0.338 | 0.589 | 0.468 | 0.704 | 1.394 | 0.479 | 0.589 | 0.230 | P01244|SOMA_RAT | SPRIGQILKQ |
| SQENPNTYSEDLDV | 0.789 | 0.869 | 0.756 | 0.874 | 1.044 | 0.062 | 0.869 | 0.061 | P06300|PDYN_RAT | SQENPNTYSEDLDV |
| SSEPEAAPAPRRL | 0.143 | 0.340 | 0.132 | 0.355 | 0.811 | -0.303 | 0.340 | 0.468 | Q9QXU9|PCS1N_RAT | SSEPEAAPAPRRL |
| SVDSAKPRVY | 0.083 | 0.259 | 0.132 | 0.355 | 0.605 | -0.725 | 0.259 | 0.587 | P01186|NEU2_RAT | SVDSAKPRVY |
| SVNPYLQ(-.98) | 0.359 | 0.607 | 0.349 | 0.603 | 1.284 | 0.360 | 0.603 | 0.220 | P27682|7B2_RAT | SVNPYLQ(-.98) |
| SVNPYLQGKRLDNVV | 0.466 | 0.676 | 0.605 | 0.806 | 1.100 | 0.137 | 0.676 | 0.170 | P27682|7B2_RAT | SVNPYLQGKRLDNVV |
| SVNPYLQGKRLDNVVA | 0.010 | 0.074 | 0.013 | 0.083 | 1.475 | 0.560 | 0.074 | 1.130 | P27682|7B2_RAT | SVNPYLQGKRLDNVVA |
| SVPHFSEEEKEPE | 0.007 | 0.064 | 0.005 | 0.049 | 1.665 | 0.736 | 0.049 | 1.309 | P27682|7B2_RAT | SVPHFSEEEKEPE |
| SVSTVLTSKYR | 0.056 | 0.215 | 0.197 | 0.420 | 0.452 | -1.145 | 0.215 | 0.667 | P01946|HBA_RAT | SVSTVLTSKYR |
| SYSMEHF | 0.769 | 0.869 | 0.605 | 0.806 | 1.084 | 0.116 | 0.806 | 0.093 | P01194|COLI_RAT | SYSMEHF |
| SYSMEHFRWGKPV(-.98) | 0.377 | 0.618 | 0.468 | 0.704 | 1.290 | 0.367 | 0.618 | 0.209 | P01194|COLI_RAT | SYSMEHFRWGKPV(-.98) |
| TAYAIYMLAMAAFPKKQN | 0.279 | 0.526 | 0.314 | 0.560 | 0.874 | -0.194 | 0.526 | 0.279 | P35171|CX7A2_RAT | TAYAIYMLAMAAFPKKQN |
| TDMELLRF | 0.579 | 0.759 | 0.654 | 0.838 | 0.581 | -0.784 | 0.759 | 0.120 | P01244|SOMA_RAT | TDMELLRF |
| TLYGFGG | 0.104 | 0.295 | 0.152 | 0.361 | 0.801 | -0.320 | 0.295 | 0.530 | P62804|H4_RAT | TLYGFGG |
| TPAMHASLDKFLASVSTVLTSKYR | 0.004 | 0.045 | 0.008 | 0.059 | 0.212 | -2.240 | 0.045 | 1.346 | P01946|HBA_RAT | TPAMHASLDKFLASVSTVLTSKYR |
| TPLPELFDRVVML | 0.968 | 0.982 | 0.863 | 0.931 | 1.257 | 0.331 | 0.931 | 0.031 | P01237|PRL_RAT | TPLPELFDRVVML |
| TPLVTLF | 0.852 | 0.914 | 0.918 | 0.959 | 1.047 | 0.067 | 0.914 | 0.039 | P01194|COLI_RAT | TPLVTLF |
| TPLVTLFKNAIIKN | 0.015 | 0.091 | 0.029 | 0.142 | 1.663 | 0.734 | 0.091 | 1.042 | P01194|COLI_RAT | TPLVTLFKNAIIKN |
| TQESVDSAKPRVY | 0.354 | 0.605 | 0.605 | 0.806 | 0.870 | -0.201 | 0.605 | 0.219 | P01186|NEU2_RAT | TQESVDSAKPRVY |
| VHLTDAEKA | 0.125 | 0.327 | 0.152 | 0.361 | 0.575 | -0.799 | 0.327 | 0.486 | P02091|HBB1_RAT:P11517|HBB2_RAT | VHLTDAEKA |
| VHLTDAEKAAVN | 0.110 | 0.303 | 0.152 | 0.361 | 0.692 | -0.531 | 0.303 | 0.519 | P02091|HBB1_RAT | VHLTDAEKAAVN |
| VHLTDAEKAAVNG | 0.227 | 0.466 | 0.314 | 0.560 | 0.785 | -0.350 | 0.466 | 0.331 | P02091|HBB1_RAT | VHLTDAEKAAVNG |
| VKVGVNGF | 0.003 | 0.036 | 0.001 | 0.016 | 0.572 | -0.807 | 0.016 | 1.785 | P04797|G3P_RAT | VKVGVNGF |
| VKVGVNGFGRIG | 0.409 | 0.640 | 0.557 | 0.781 | 0.851 | -0.233 | 0.640 | 0.193 | P04797|G3P_RAT | VKVGVNGFGRIG |
| VPHFSEEEKEPE | 0.503 | 0.699 | 0.605 | 0.806 | 1.149 | 0.200 | 0.699 | 0.155 | P27682|7B2_RAT | VPHFSEEEKEPE |
| VQLAGTQESVDSAKP | 0.111 | 0.303 | 0.099 | 0.294 | 1.520 | 0.604 | 0.294 | 0.532 | P01186|NEU2_RAT | VQLAGTQESVDSAKP |
| VQLAGTQESVDSAKPR | 0.627 | 0.803 | 0.173 | 0.384 | 1.450 | 0.536 | 0.384 | 0.415 | P01186|NEU2_RAT | VQLAGTQESVDSAKPR |
| VQLAGTQESVDSAKPRV | 0.464 | 0.676 | 0.468 | 0.704 | 1.619 | 0.695 | 0.676 | 0.170 | P01186|NEU2_RAT | VQLAGTQESVDSAKPRV |
| VQLAGTQESVDSAKPRVY | 0.977 | 0.982 | 0.809 | 0.897 | 1.096 | 0.132 | 0.897 | 0.047 | P01186|NEU2_RAT | VQLAGTQESVDSAKPRVY |
| WSRMDQLAKELT | 0.746 | 0.867 | 0.756 | 0.874 | 1.123 | 0.168 | 0.867 | 0.062 | P10354|CMGA_RAT | WSRMDQLAKELT |
| WSRMDQLAKELTAE | 0.096 | 0.282 | 0.061 | 0.208 | 1.475 | 0.561 | 0.208 | 0.681 | P10354|CMGA_RAT | WSRMDQLAKELTAE |
| Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF | 0.662 | 0.828 | 0.756 | 0.874 | 1.017 | 0.024 | 0.828 | 0.082 | P01194|COLI_RAT | Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF |
| Y(+42.01)GGFMTSEK | 0.723 | 0.860 | 0.705 | 0.869 | 1.160 | 0.214 | 0.860 | 0.066 | P01194|COLI_RAT | Y(+42.01)GGFMTSEK |
| Y(+42.01)GGFMTSEKSQ | 0.803 | 0.878 | 0.863 | 0.931 | 1.119 | 0.163 | 0.878 | 0.057 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQ |
| Y(+42.01)GGFMTSEKSQTP | 0.085 | 0.259 | 0.173 | 0.384 | 1.428 | 0.514 | 0.259 | 0.587 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTP |
| Y(+42.01)GGFMTSEKSQTPL | 0.956 | 0.982 | 0.756 | 0.874 | 0.944 | -0.083 | 0.874 | 0.059 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPL |
| Y(+42.01)GGFMTSEKSQTPLV | 0.863 | 0.919 | 0.809 | 0.897 | 0.983 | -0.025 | 0.897 | 0.047 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLV |
| Y(+42.01)GGFMTSEKSQTPLVT | 0.410 | 0.640 | 0.512 | 0.730 | 0.823 | -0.282 | 0.640 | 0.193 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVT |
| Y(+42.01)GGFMTSEKSQTPLVTL | 0.039 | 0.171 | 0.061 | 0.208 | 0.561 | -0.835 | 0.171 | 0.767 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTL |
| Y(+42.01)GGFMTSEKSQTPLVTLF | 0.053 | 0.207 | 0.072 | 0.232 | 0.429 | -1.222 | 0.207 | 0.684 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLF |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK | 0.383 | 0.621 | 0.251 | 0.509 | 0.732 | -0.450 | 0.509 | 0.294 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN | 0.008 | 0.071 | 0.008 | 0.059 | 0.531 | -0.914 | 0.059 | 1.227 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN |
| Y(+42.01)SMEHFRWGKPV(-.98) | 0.011 | 0.074 | 0.020 | 0.104 | 1.977 | 0.983 | 0.074 | 1.130 | P01194|COLI_RAT | Y(+42.01)SMEHFRWGKPV(-.98) |
| YEENSRENPF | 0.373 | 0.618 | 0.468 | 0.704 | 1.309 | 0.389 | 0.618 | 0.209 | P10362|SCG2_RAT | YEENSRENPF |
| YGGFLRKYP | 0.046 | 0.189 | 0.036 | 0.150 | 1.765 | 0.820 | 0.150 | 0.824 | P06300|PDYN_RAT | YGGFLRKYP |
| YGGFLRKYPK | 0.172 | 0.381 | 0.282 | 0.531 | 1.536 | 0.619 | 0.381 | 0.419 | P06300|PDYN_RAT | YGGFLRKYPK |
| YGGFLRRI | 0.027 | 0.128 | 0.020 | 0.104 | 1.361 | 0.445 | 0.104 | 0.983 | P06300|PDYN_RAT | YGGFLRRI |
| YGGFLRRQFKVVT | 0.067 | 0.245 | 0.036 | 0.150 | 1.476 | 0.561 | 0.150 | 0.824 | P06300|PDYN_RAT | YGGFLRRQFKVVT |
| YGGFMTSEKSQTPLVT | 0.232 | 0.469 | 0.387 | 0.634 | 1.569 | 0.650 | 0.469 | 0.329 | P01194|COLI_RAT | YGGFMTSEKSQTPLVT |
| YGGFMTSEKSQTPLVTL | 0.202 | 0.437 | 0.152 | 0.361 | 1.539 | 0.622 | 0.361 | 0.443 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTL |
| YGGFMTSEKSQTPLVTLF | 0.456 | 0.676 | 0.387 | 0.634 | 0.842 | -0.248 | 0.634 | 0.198 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTLF |
| YGGFMTSEKSQTPLVTLFKNAIIKN | 0.481 | 0.680 | 0.426 | 0.679 | 0.944 | -0.083 | 0.679 | 0.168 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTLFKNAIIKN |
| YKVNEYQGPVAPSGGFFLFRPRN(-.98) | 0.790 | 0.869 | 0.973 | 0.985 | 0.942 | -0.087 | 0.869 | 0.061 | P12760|NMU_RAT | YKVNEYQGPVAPSGGFFLFRPRN(-.98) |
# get DE features only tibble
uni_res_filt <- uni_res %>%
dplyr::filter(BHT < FDR & BHW < FDR) %>%
mutate(status = case_when(`FC(log2)` < - 0.6 ~ "Down",
`FC(log2)` > 0.6 ~ "Up") )
if (nrow(uni_res_filt) == 0){
print(paste("There is no significant differentiated features between",
temp_d$Label[2], "and", temp_d$Label[1], sep = " "))
} else {
uni_res_filt = uni_res_filt %>%
left_join(., feature_meta, by = c("variable" = "Peptide"))
#write.csv(uni_res_filt, file = paste(combo_list[[i]][1], "vs", combo_list[[i]][2], ".csv", sep = ""))
uni_res_filt %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")
}| variable | pT | BHT | pW | BHW | FC(lin) | FC(log2) | padj | -log10padj | status | Accession | org_peptide_name |
|---|---|---|---|---|---|---|---|---|---|---|---|
| FPAMPLSSLF | 0.000 | 0.006 | 0.001 | 0.011 | 0.405 | -1.305 | 0.006 | 2.207 | Down | P01244|SOMA_RAT | FPAMPLSSLF |
| FPAMPLSSLFA | 0.000 | 0.006 | 0.001 | 0.011 | 0.205 | -2.286 | 0.006 | 2.207 | Down | P01244|SOMA_RAT | FPAMPLSSLFA |
| FPAMPLSSLFAN | 0.000 | 0.006 | 0.000 | 0.006 | 0.240 | -2.058 | 0.006 | 2.253 | Down | P01244|SOMA_RAT | FPAMPLSSLFAN |
| FPAMPLSSLFANA | 0.001 | 0.020 | 0.002 | 0.026 | 0.238 | -2.073 | 0.020 | 1.694 | Down | P01244|SOMA_RAT | FPAMPLSSLFANA |
| FPAMPLSSLFANAVLR | 0.000 | 0.003 | 0.000 | 0.002 | 0.225 | -2.151 | 0.002 | 2.731 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLR |
| FPAMPLSSLFANAVLRA | 0.001 | 0.014 | 0.001 | 0.016 | 0.306 | -1.708 | 0.014 | 1.852 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRA |
| FPAMPLSSLFANAVLRAQH | 0.000 | 0.000 | 0.000 | 0.001 | 0.303 | -1.722 | 0.000 | 3.817 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQH |
| FPAMPLSSLFANAVLRAQHLH | 0.000 | 0.002 | 0.000 | 0.004 | 0.406 | -1.299 | 0.002 | 2.652 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLH |
| FPAMPLSSLFANAVLRAQHLHQ | 0.000 | 0.002 | 0.000 | 0.006 | 0.459 | -1.122 | 0.002 | 2.652 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQ |
| FPAMPLSSLFANAVLRAQHLHQLA | 0.002 | 0.030 | 0.003 | 0.030 | 0.375 | -1.414 | 0.030 | 1.525 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLA |
| FPAMPLSSLFANAVLRAQHLHQLAAD | 0.001 | 0.023 | 0.002 | 0.026 | 0.391 | -1.356 | 0.023 | 1.646 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLAAD |
| LDEGHDPVHESPV | 0.002 | 0.023 | 0.000 | 0.007 | 2.336 | 1.224 | 0.007 | 2.156 | Up | O35314|SCG1_RAT | LDEGHDPVHESPV |
| LLDEGHDPVHESPVDTA | 0.002 | 0.025 | 0.001 | 0.016 | 1.855 | 0.891 | 0.016 | 1.785 | Up | O35314|SCG1_RAT | LLDEGHDPVHESPVDTA |
| RTLYGFGG | 0.003 | 0.036 | 0.003 | 0.030 | 0.546 | -0.873 | 0.030 | 1.520 | Down | P62804|H4_RAT | RTLYGFGG |
| VKVGVNGF | 0.003 | 0.036 | 0.001 | 0.016 | 0.572 | -0.807 | 0.016 | 1.785 | Down | P04797|G3P_RAT | VKVGVNGF |
# volcano plot
volcano_plot(uni_res_annotation, feature_col = "variable", fdr = FDR, log2fc = LOG2FC, save = FALSE)# heatmap
anno <- data.frame(Label = as.factor(t(d5)[, "class"])) %>%
dplyr::filter(Label %in% contrast ) %>%
droplevels()
hm <- d5[-1, d5[1,] %in% contrast ] %>%
rownames_to_column("variable") %>%
mutate(across(-variable, as.numeric)) #%>%
#left_join(., feature_meta, by = c("variable" = "Feature"))
heatmap(hm, feature_col = "variable", sample_anno = anno, feature_anno = feature_meta, feature_label = "Peptide", rowname_switch = TRUE, save = FALSE)contrast = combo_list[[2]]
df = d5_mod %>%
dplyr::filter(., Label %in% contrast ) %>%
droplevels()
temp_d <- df %>%
mutate(across(-Label, ~ 2^(.) )) %>% # d3_mod is log-scale number, this step will de-log and change data back to linear number
group_by(Label) %>%
summarise(across(everything(), mean))
print(paste("Order of Fold Change:", temp_d$Label[1], "over", temp_d$Label[2], sep = " "))[1] "Order of Fold Change: Iso over SP"
uni_res = do_univariate(df, order = c("SP", "Iso"))
uni_res <- uni_res %>%
rowwise() %>%
mutate(padj = min(c(BHT, BHW))) %>%
# get the lowest padj
ungroup() %>%
mutate(`-log10padj` = -log10(padj))
uni_res_annotation = uni_res %>% left_join(., feature_meta, by = c("variable" = "Peptide"))
uni_res_annotation %>%
#mutate(across(-variable, round, digit=3)) %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")| variable | pT | BHT | pW | BHW | FC(lin) | FC(log2) | padj | -log10padj | Accession | org_peptide_name |
|---|---|---|---|---|---|---|---|---|---|---|
| A(+42.01)AYKLVLIRH | 0.059 | 0.192 | 0.076 | 0.222 | 0.688 | -0.540 | 0.192 | 0.716 | P25113|PGAM1_RAT | A(+42.01)AYKLVLIRH |
| A(+42.01)AYKLVLIRHGE | 0.955 | 0.966 | 0.797 | 0.908 | 1.013 | 0.019 | 0.908 | 0.042 | P25113|PGAM1_RAT | A(+42.01)AYKLVLIRHGE |
| AAFQKVVAGVASALAHKYH | 0.077 | 0.223 | 0.088 | 0.240 | 0.618 | -0.694 | 0.223 | 0.652 | P02091|HBB1_RAT:P11517|HBB2_RAT | AAFQKVVAGVASALAHKYH |
| AEAFPLEF | 0.067 | 0.201 | 0.076 | 0.222 | 1.724 | 0.786 | 0.201 | 0.697 | P01194|COLI_RAT | AEAFPLEF |
| AEEETAGGDGRPEPSP | 0.687 | 0.834 | 0.652 | 0.804 | 1.251 | 0.323 | 0.804 | 0.095 | P01194|COLI_RAT | AEEETAGGDGRPEPSP |
| AEEETAGGDGRPEPSPR | 0.820 | 0.888 | 1.000 | 1.000 | 1.037 | 0.053 | 0.888 | 0.051 | P01194|COLI_RAT | AEEETAGGDGRPEPSPR |
| AEEETAGGDGRPEPSPRE(-.98) | 0.922 | 0.945 | 0.438 | 0.625 | 1.100 | 0.137 | 0.625 | 0.204 | P01194|COLI_RAT | AEEETAGGDGRPEPSPRE(-.98) |
| AFQKVVAGVASALAHKYH | 0.766 | 0.873 | 0.652 | 0.804 | 0.795 | -0.332 | 0.804 | 0.095 | P02091|HBB1_RAT:P11517|HBB2_RAT | AFQKVVAGVASALAHKYH |
| AGTQESVDSAKP | 0.040 | 0.163 | 0.040 | 0.156 | 1.951 | 0.965 | 0.156 | 0.807 | P01186|NEU2_RAT | AGTQESVDSAKP |
| AGTQESVDSAKPRVY | 0.639 | 0.798 | 0.401 | 0.592 | 1.338 | 0.420 | 0.592 | 0.227 | P01186|NEU2_RAT | AGTQESVDSAKPRVY |
| AKVAVLGA | 0.442 | 0.642 | 0.699 | 0.831 | 0.937 | -0.093 | 0.642 | 0.192 | P04636|MDHM_RAT | AKVAVLGA |
| AQAAFQKVVAGVASALAHKYH | 0.025 | 0.120 | 0.047 | 0.172 | 0.589 | -0.763 | 0.120 | 0.919 | P02091|HBB1_RAT:P11517|HBB2_RAT | AQAAFQKVVAGVASALAHKYH |
| ASALAHKYH | 0.335 | 0.545 | 0.401 | 0.592 | 1.317 | 0.398 | 0.545 | 0.264 | P02091|HBB1_RAT:P11517|HBB2_RAT | ASALAHKYH |
| ASLDKFLASVSTVLTSKYR | 0.006 | 0.050 | 0.013 | 0.081 | 0.433 | -1.207 | 0.050 | 1.305 | P01946|HBA_RAT | ASLDKFLASVSTVLTSKYR |
| AVDQDLGPEVPPENVL(-.98) | 0.192 | 0.388 | 0.193 | 0.373 | 1.225 | 0.293 | 0.373 | 0.429 | Q9QXU9|PCS1N_RAT | AVDQDLGPEVPPENVL(-.98) |
| DEGHDPVHESPVDTA | 0.013 | 0.086 | 0.013 | 0.081 | 1.859 | 0.894 | 0.081 | 1.092 | O35314|SCG1_RAT | DEGHDPVHESPVDTA |
| DPVHESPVDT | 0.258 | 0.466 | 0.243 | 0.423 | 0.844 | -0.245 | 0.423 | 0.373 | O35314|SCG1_RAT | DPVHESPVDT |
| DPVHESPVDTA | 0.625 | 0.795 | 0.949 | 0.966 | 1.041 | 0.058 | 0.795 | 0.100 | O35314|SCG1_RAT | DPVHESPVDTA |
| EAFPLEF | 0.095 | 0.250 | 0.151 | 0.326 | 1.585 | 0.665 | 0.250 | 0.602 | P01194|COLI_RAT | EAFPLEF |
| EEETAGGDGRPEPSPRE(-.98) | 0.676 | 0.834 | 0.332 | 0.518 | 1.029 | 0.041 | 0.518 | 0.286 | P01194|COLI_RAT | EEETAGGDGRPEPSPRE(-.98) |
| EETAGGDGRPEPSPRE(-.98) | 0.692 | 0.834 | 0.652 | 0.804 | 0.852 | -0.231 | 0.804 | 0.095 | P01194|COLI_RAT | EETAGGDGRPEPSPRE(-.98) |
| EGFFRLT | 0.005 | 0.049 | 0.002 | 0.023 | 0.657 | -0.605 | 0.023 | 1.630 | P01186|NEU2_RAT | EGFFRLT |
| ELDQLLHY | 0.867 | 0.923 | 0.606 | 0.777 | 0.890 | -0.169 | 0.777 | 0.110 | O35314|SCG1_RAT | ELDQLLHY |
| ELEGEQPD | 0.080 | 0.224 | 0.151 | 0.326 | 1.386 | 0.470 | 0.224 | 0.650 | P01194|COLI_RAT | ELEGEQPD |
| ESVDSAKPRVY | 0.011 | 0.080 | 0.013 | 0.081 | 0.663 | -0.593 | 0.080 | 1.098 | P01186|NEU2_RAT | ESVDSAKPRVY |
| F(+42.01)PAMPLSSLFANAVLRAQHLH | 0.738 | 0.869 | 0.748 | 0.857 | 1.235 | 0.304 | 0.857 | 0.067 | P01244|SOMA_RAT | F(+42.01)PAMPLSSLFANAVLRAQHLH |
| FLASVSTVLTSKYR | 0.222 | 0.420 | 0.606 | 0.777 | 0.812 | -0.300 | 0.420 | 0.377 | P01946|HBA_RAT | FLASVSTVLTSKYR |
| FMTSEKSQTP | 0.179 | 0.380 | 0.101 | 0.256 | 1.489 | 0.574 | 0.256 | 0.592 | P01194|COLI_RAT | FMTSEKSQTP |
| FNPYFDPL | 0.330 | 0.545 | 0.217 | 0.395 | 1.121 | 0.165 | 0.395 | 0.403 | O35314|SCG1_RAT | FNPYFDPL |
| FPAM(+15.99)PLSSLFANAVLR | 0.753 | 0.869 | 0.898 | 0.956 | 0.842 | -0.249 | 0.869 | 0.061 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLR |
| FPAM(+15.99)PLSSLFANAVLRAQH | 0.637 | 0.798 | 0.699 | 0.831 | 0.833 | -0.263 | 0.798 | 0.098 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLRAQH |
| FPAM(+15.99)PLSSLFANAVLRAQHLH | 0.055 | 0.192 | 0.065 | 0.210 | 0.480 | -1.060 | 0.192 | 0.716 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLRAQHLH |
| FPAMPLS | 0.293 | 0.507 | 0.193 | 0.373 | 0.747 | -0.421 | 0.373 | 0.429 | P01244|SOMA_RAT | FPAMPLS |
| FPAMPLSS | 0.064 | 0.201 | 0.076 | 0.222 | 0.622 | -0.685 | 0.201 | 0.697 | P01244|SOMA_RAT | FPAMPLSS |
| FPAMPLSSL | 0.014 | 0.087 | 0.028 | 0.144 | 0.557 | -0.844 | 0.087 | 1.059 | P01244|SOMA_RAT | FPAMPLSSL |
| FPAMPLSSLF | 0.041 | 0.163 | 0.040 | 0.156 | 0.557 | -0.844 | 0.156 | 0.807 | P01244|SOMA_RAT | FPAMPLSSLF |
| FPAMPLSSLFA | 0.003 | 0.035 | 0.002 | 0.023 | 0.295 | -1.761 | 0.023 | 1.630 | P01244|SOMA_RAT | FPAMPLSSLFA |
| FPAMPLSSLFAN | 0.002 | 0.029 | 0.002 | 0.025 | 0.323 | -1.630 | 0.025 | 1.601 | P01244|SOMA_RAT | FPAMPLSSLFAN |
| FPAMPLSSLFANA | 0.996 | 0.999 | 0.478 | 0.664 | 0.473 | -1.080 | 0.664 | 0.178 | P01244|SOMA_RAT | FPAMPLSSLFANA |
| FPAMPLSSLFANAVLR | 0.003 | 0.035 | 0.007 | 0.054 | 0.363 | -1.463 | 0.035 | 1.455 | P01244|SOMA_RAT | FPAMPLSSLFANAVLR |
| FPAMPLSSLFANAVLRA | 0.515 | 0.687 | 0.332 | 0.518 | 0.728 | -0.458 | 0.518 | 0.286 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRA |
| FPAMPLSSLFANAVLRAQ | 0.813 | 0.888 | 0.748 | 0.857 | 0.867 | -0.207 | 0.857 | 0.067 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQ |
| FPAMPLSSLFANAVLRAQH | 0.000 | 0.001 | 0.000 | 0.002 | 0.414 | -1.274 | 0.001 | 3.163 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQH |
| FPAMPLSSLFANAVLRAQHLH | 0.001 | 0.023 | 0.001 | 0.019 | 0.481 | -1.056 | 0.019 | 1.722 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLH |
| FPAMPLSSLFANAVLRAQHLHQ | 0.000 | 0.012 | 0.000 | 0.010 | 0.539 | -0.892 | 0.010 | 1.984 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQ |
| FPAMPLSSLFANAVLRAQHLHQL | 0.378 | 0.593 | 0.151 | 0.326 | 0.739 | -0.437 | 0.326 | 0.486 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQL |
| FPAMPLSSLFANAVLRAQHLHQLA | 0.087 | 0.234 | 0.040 | 0.156 | 0.694 | -0.528 | 0.156 | 0.807 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLA |
| FPAMPLSSLFANAVLRAQHLHQLAAD | 0.442 | 0.642 | 0.519 | 0.703 | 0.916 | -0.127 | 0.642 | 0.192 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLAAD |
| FPKPEGSQD | 0.106 | 0.268 | 0.151 | 0.326 | 1.345 | 0.427 | 0.268 | 0.572 | P47868|SCG3_RAT | FPKPEGSQD |
| FPKPEGSQDKSLHN | 0.223 | 0.420 | 0.438 | 0.625 | 0.768 | -0.380 | 0.420 | 0.377 | P47868|SCG3_RAT | FPKPEGSQDKSLHN |
| GPNLVARSKEALA | 0.019 | 0.113 | 0.040 | 0.156 | 0.569 | -0.812 | 0.113 | 0.948 | P02770|ALBU_RAT | GPNLVARSKEALA |
| GPVQFLSRIF | 0.434 | 0.641 | 0.332 | 0.518 | 1.195 | 0.257 | 0.518 | 0.286 | P01244|SOMA_RAT | GPVQFLSRIF |
| GPYRVEHF | 0.112 | 0.273 | 0.047 | 0.172 | 1.329 | 0.411 | 0.172 | 0.763 | P01194|COLI_RAT | GPYRVEHF |
| GPYRVEHFRWGNPPKD | 0.596 | 0.764 | 0.847 | 0.945 | 1.208 | 0.273 | 0.764 | 0.117 | P01194|COLI_RAT | GPYRVEHFRWGNPPKD |
| GRGREPGAYPALDSRQE | 0.380 | 0.593 | 0.217 | 0.395 | 1.245 | 0.316 | 0.395 | 0.403 | O35314|SCG1_RAT | GRGREPGAYPALDSRQE |
| GRTLYGFGG | 0.128 | 0.295 | 0.065 | 0.210 | 0.748 | -0.418 | 0.210 | 0.679 | P62804|H4_RAT | GRTLYGFGG |
| GTQESVDSAKPRVY | 0.747 | 0.869 | 0.652 | 0.804 | 1.071 | 0.100 | 0.804 | 0.095 | P01186|NEU2_RAT | GTQESVDSAKPRVY |
| GVASALAHKYH | 0.011 | 0.080 | 0.019 | 0.109 | 0.506 | -0.982 | 0.080 | 1.098 | P02091|HBB1_RAT:P11517|HBB2_RAT | GVASALAHKYH |
| IKMALQQEGFD | 0.792 | 0.888 | 0.332 | 0.518 | 0.620 | -0.689 | 0.518 | 0.286 | P28841|NEC2_RAT | IKMALQQEGFD |
| KYVMGHF | 0.183 | 0.381 | 0.151 | 0.326 | 1.242 | 0.312 | 0.326 | 0.486 | P01194|COLI_RAT | KYVMGHF |
| KYVMGHFRWD | 0.087 | 0.234 | 0.101 | 0.256 | 1.663 | 0.734 | 0.234 | 0.631 | P01194|COLI_RAT | KYVMGHFRWD |
| LDEGHDPV | 0.001 | 0.023 | 0.001 | 0.018 | 2.018 | 1.013 | 0.018 | 1.746 | O35314|SCG1_RAT | LDEGHDPV |
| LDEGHDPVHESPV | 0.002 | 0.029 | 0.004 | 0.037 | 2.057 | 1.040 | 0.029 | 1.540 | O35314|SCG1_RAT | LDEGHDPVHESPV |
| LENSSPQAPA | 0.062 | 0.199 | 0.076 | 0.222 | 1.548 | 0.631 | 0.199 | 0.702 | Q9QXU9|PCS1N_RAT | LENSSPQAPA |
| LENSSPQAPARRLLPP | 0.115 | 0.273 | 0.056 | 0.186 | 1.700 | 0.765 | 0.186 | 0.730 | Q9QXU9|PCS1N_RAT | LENSSPQAPARRLLPP |
| LLDEGHDPVHESPVD | 0.276 | 0.485 | 0.088 | 0.240 | 1.345 | 0.428 | 0.240 | 0.619 | O35314|SCG1_RAT | LLDEGHDPVHESPVD |
| LLDEGHDPVHESPVDT | 0.161 | 0.351 | 0.040 | 0.156 | 1.439 | 0.525 | 0.156 | 0.807 | O35314|SCG1_RAT | LLDEGHDPVHESPVDT |
| LLDEGHDPVHESPVDTA | 0.002 | 0.025 | 0.001 | 0.019 | 1.833 | 0.874 | 0.019 | 1.722 | O35314|SCG1_RAT | LLDEGHDPVHESPVDTA |
| LLRALASSNARAQQ | 0.013 | 0.086 | 0.004 | 0.037 | 1.707 | 0.771 | 0.037 | 1.427 | Q792G6|GNAS3_RAT | LLRALASSNARAQQ |
| LPGLLLF | 0.901 | 0.941 | 0.748 | 0.857 | 0.855 | -0.226 | 0.857 | 0.067 | P01230|LSHB_RAT | LPGLLLF |
| LPHLPGLLLF | 0.891 | 0.937 | 0.898 | 0.956 | 0.876 | -0.191 | 0.937 | 0.028 | P01230|LSHB_RAT | LPHLPGLLLF |
| LVQLAGTQESVDSAKPRVY | 0.349 | 0.560 | 0.365 | 0.560 | 1.333 | 0.414 | 0.560 | 0.252 | P01186|NEU2_RAT | LVQLAGTQESVDSAKPRVY |
| MDQLAKELT | 0.036 | 0.157 | 0.116 | 0.281 | 1.435 | 0.521 | 0.157 | 0.803 | P10354|CMGA_RAT | MDQLAKELT |
| MDQLAKELTAE | 0.237 | 0.436 | 0.300 | 0.487 | 1.505 | 0.590 | 0.436 | 0.360 | P10354|CMGA_RAT | MDQLAKELTAE |
| MQIFVKTL | 0.278 | 0.485 | 0.300 | 0.487 | 0.704 | -0.505 | 0.485 | 0.314 | P62982|RS27A_RAT:P62986|RL40_RAT:P0CG51|UBB_RAT:Q63429|UBC_RAT | MQIFVKTL |
| NPYFDPLQWKNSDFE | 0.478 | 0.659 | 0.401 | 0.592 | 0.867 | -0.205 | 0.592 | 0.227 | O35314|SCG1_RAT | NPYFDPLQWKNSDFE |
| NQEQAEQGREHL | 0.750 | 0.869 | 0.898 | 0.956 | 0.971 | -0.043 | 0.869 | 0.061 | P10362|SCG2_RAT | NQEQAEQGREHL |
| PESAFSE | 0.001 | 0.023 | 0.001 | 0.015 | 1.948 | 0.962 | 0.015 | 1.821 | P01179|NEU1_RAT | PESAFSE |
| PHFLYPK | 0.036 | 0.157 | 0.034 | 0.156 | 1.480 | 0.566 | 0.156 | 0.807 | P05371|CLUS_RAT | PHFLYPK |
| PMFIVNTNVPRA | 0.485 | 0.662 | 0.562 | 0.749 | 0.898 | -0.156 | 0.662 | 0.179 | P30904|MIF_RAT | PMFIVNTNVPRA |
| PVHESPVDTA | 0.002 | 0.029 | 0.001 | 0.015 | 2.250 | 1.170 | 0.015 | 1.821 | O35314|SCG1_RAT | PVHESPVDTA |
| PVQFLSRIF | 0.878 | 0.929 | 0.949 | 0.966 | 1.118 | 0.162 | 0.929 | 0.032 | P01244|SOMA_RAT | PVQFLSRIF |
| Q(-17.03)ELGKLTGPSNQ | 0.115 | 0.273 | 0.193 | 0.373 | 1.277 | 0.352 | 0.273 | 0.564 | P10362|SCG2_RAT | Q(-17.03)ELGKLTGPSNQ |
| Q(-17.03)EPGAPAAGM | 0.558 | 0.732 | 0.949 | 0.966 | 0.935 | -0.097 | 0.732 | 0.135 | P15087|CBPE_RAT | Q(-17.03)EPGAPAAGM |
| Q(-17.03)EPGAPAAGM(+15.99) | 0.024 | 0.120 | 0.013 | 0.081 | 1.505 | 0.590 | 0.081 | 1.092 | P15087|CBPE_RAT | Q(-17.03)EPGAPAAGM(+15.99) |
| Q(-17.03)KIAEKFSQ | 0.000 | 0.012 | 0.000 | 0.010 | 2.080 | 1.057 | 0.010 | 1.984 | O35314|SCG1_RAT | Q(-17.03)KIAEKFSQ |
| Q(-17.03)KIAEKFSQR(-.98) | 0.009 | 0.070 | 0.008 | 0.065 | 1.614 | 0.691 | 0.065 | 1.187 | O35314|SCG1_RAT | Q(-17.03)KIAEKFSQR(-.98) |
| QAAFQKVVAGVASALAHKYH | 0.325 | 0.544 | 0.478 | 0.664 | 0.732 | -0.450 | 0.544 | 0.264 | P02091|HBB1_RAT:P11517|HBB2_RAT | QAAFQKVVAGVASALAHKYH |
| R(+42.01)PVKVYPNVAENESAEAFPLEF | 0.025 | 0.120 | 0.056 | 0.186 | 2.232 | 1.159 | 0.120 | 0.919 | P01194|COLI_RAT | R(+42.01)PVKVYPNVAENESAEAFPLEF |
| RAEEETAGGDGRPEPSPRE(-.98) | 0.469 | 0.659 | 0.606 | 0.777 | 1.776 | 0.829 | 0.659 | 0.181 | P01194|COLI_RAT | RAEEETAGGDGRPEPSPRE(-.98) |
| RPVKVYPNVAENE | 0.271 | 0.483 | 0.270 | 0.462 | 1.445 | 0.531 | 0.462 | 0.336 | P01194|COLI_RAT | RPVKVYPNVAENE |
| RPVKVYPNVAENES(+79.97)AEAFPLE | 0.416 | 0.632 | 0.562 | 0.749 | 1.122 | 0.167 | 0.632 | 0.200 | P01194|COLI_RAT | RPVKVYPNVAENES(+79.97)AEAFPLE |
| RPVKVYPNVAENES(+79.97)AEAFPLEF | 0.464 | 0.659 | 0.243 | 0.423 | 1.224 | 0.292 | 0.423 | 0.373 | P01194|COLI_RAT | RPVKVYPNVAENES(+79.97)AEAFPLEF |
| RPVKVYPNVAENESAEAFPLE | 0.139 | 0.312 | 0.217 | 0.395 | 1.342 | 0.424 | 0.312 | 0.506 | P01194|COLI_RAT | RPVKVYPNVAENESAEAFPLE |
| RPVKVYPNVAENESAEAFPLEF | 0.478 | 0.659 | 0.699 | 0.831 | 1.028 | 0.040 | 0.659 | 0.181 | P01194|COLI_RAT | RPVKVYPNVAENESAEAFPLEF |
| RRPVKVYPNVAENESAEAFPLEF | 0.563 | 0.733 | 0.519 | 0.703 | 1.038 | 0.054 | 0.703 | 0.153 | P01194|COLI_RAT | RRPVKVYPNVAENESAEAFPLEF |
| RTLYGFGG | 0.035 | 0.157 | 0.019 | 0.109 | 0.646 | -0.630 | 0.109 | 0.964 | P62804|H4_RAT | RTLYGFGG |
| S(+42.01)MEHFRWGKPV(-.98) | 0.098 | 0.256 | 0.101 | 0.256 | 1.740 | 0.799 | 0.256 | 0.592 | P01194|COLI_RAT | S(+42.01)MEHFRWGKPV(-.98) |
| S(+42.01)YSMEHF | 0.950 | 0.966 | 0.898 | 0.956 | 0.874 | -0.195 | 0.956 | 0.020 | P01194|COLI_RAT | S(+42.01)YSMEHF |
| S(+42.01)YSMEHFRWGKPV(-.98) | 0.806 | 0.888 | 0.898 | 0.956 | 1.039 | 0.056 | 0.888 | 0.051 | P01194|COLI_RAT | S(+42.01)YSMEHFRWGKPV(-.98) |
| SAEAFPLEF | 0.910 | 0.943 | 1.000 | 1.000 | 0.770 | -0.378 | 0.943 | 0.026 | P01194|COLI_RAT | SAEAFPLEF |
| SAVISLEGKPL | 0.137 | 0.312 | 0.217 | 0.395 | 0.774 | -0.369 | 0.312 | 0.506 | P45592|COF1_RAT | SAVISLEGKPL |
| SEES(+79.97)QEKEY | 0.218 | 0.420 | 0.300 | 0.487 | 1.246 | 0.318 | 0.420 | 0.377 | O35314|SCG1_RAT | SEES(+79.97)QEKEY |
| SLDKFLA | 0.808 | 0.888 | 0.847 | 0.945 | 0.517 | -0.951 | 0.888 | 0.051 | P01946|HBA_RAT | SLDKFLA |
| SLDKFLASVSTVLTSKYR | 0.401 | 0.620 | 0.300 | 0.487 | 1.046 | 0.064 | 0.487 | 0.312 | P01946|HBA_RAT | SLDKFLASVSTVLTSKYR |
| SLKPEFVDIINAKQ | 0.044 | 0.167 | 0.040 | 0.156 | 0.614 | -0.705 | 0.156 | 0.807 | P48500|TPIS_RAT | SLKPEFVDIINAKQ |
| SLSAASAPLAETSTPL | 0.037 | 0.157 | 0.101 | 0.256 | 1.352 | 0.435 | 0.157 | 0.803 | Q9QXU9|PCS1N_RAT | SLSAASAPLAETSTPL |
| SLSAASAPLAETSTPLRL | 0.022 | 0.120 | 0.040 | 0.156 | 1.646 | 0.719 | 0.120 | 0.919 | Q9QXU9|PCS1N_RAT | SLSAASAPLAETSTPLRL |
| SMEHFRWGKPV(-.98) | 0.170 | 0.366 | 0.193 | 0.373 | 1.407 | 0.493 | 0.366 | 0.437 | P01194|COLI_RAT | SMEHFRWGKPV(-.98) |
| SNRVVDLMAYMASKE | 0.008 | 0.064 | 0.002 | 0.025 | 0.439 | -1.189 | 0.025 | 1.601 | P04797|G3P_RAT | SNRVVDLMAYMASKE |
| SPRIGQILK | 0.056 | 0.192 | 0.076 | 0.222 | 0.616 | -0.698 | 0.192 | 0.716 | P01244|SOMA_RAT | SPRIGQILK |
| SPRIGQILKQ | 0.186 | 0.381 | 0.171 | 0.351 | 1.420 | 0.506 | 0.351 | 0.454 | P01244|SOMA_RAT | SPRIGQILKQ |
| SQENPNTYSEDLDV | 0.336 | 0.545 | 0.519 | 0.703 | 1.243 | 0.314 | 0.545 | 0.264 | P06300|PDYN_RAT | SQENPNTYSEDLDV |
| SSEPEAAPAPRRL | 0.214 | 0.418 | 0.217 | 0.395 | 1.189 | 0.250 | 0.395 | 0.403 | Q9QXU9|PCS1N_RAT | SSEPEAAPAPRRL |
| SVDSAKPRVY | 0.829 | 0.888 | 0.949 | 0.966 | 1.023 | 0.033 | 0.888 | 0.051 | P01186|NEU2_RAT | SVDSAKPRVY |
| SVNPYLQ(-.98) | 0.200 | 0.400 | 0.243 | 0.423 | 1.399 | 0.485 | 0.400 | 0.398 | P27682|7B2_RAT | SVNPYLQ(-.98) |
| SVNPYLQGKRLDNVV | 0.451 | 0.649 | 0.606 | 0.777 | 1.169 | 0.226 | 0.649 | 0.188 | P27682|7B2_RAT | SVNPYLQGKRLDNVV |
| SVNPYLQGKRLDNVVA | 0.081 | 0.224 | 0.116 | 0.281 | 1.260 | 0.333 | 0.224 | 0.650 | P27682|7B2_RAT | SVNPYLQGKRLDNVVA |
| SVPHFSEEEKEPE | 0.001 | 0.025 | 0.000 | 0.015 | 1.737 | 0.796 | 0.015 | 1.821 | P27682|7B2_RAT | SVPHFSEEEKEPE |
| SVSTVLTSKYR | 0.022 | 0.120 | 0.023 | 0.123 | 0.504 | -0.989 | 0.120 | 0.919 | P01946|HBA_RAT | SVSTVLTSKYR |
| SYSMEHF | 0.425 | 0.633 | 0.365 | 0.560 | 0.864 | -0.211 | 0.560 | 0.252 | P01194|COLI_RAT | SYSMEHF |
| SYSMEHFRWGKPV(-.98) | 0.477 | 0.659 | 0.438 | 0.625 | 1.175 | 0.232 | 0.625 | 0.204 | P01194|COLI_RAT | SYSMEHFRWGKPV(-.98) |
| TAYAIYMLAMAAFPKKQN | 0.642 | 0.798 | 0.699 | 0.831 | 0.886 | -0.174 | 0.798 | 0.098 | P35171|CX7A2_RAT | TAYAIYMLAMAAFPKKQN |
| TDMELLRF | 0.418 | 0.632 | 0.699 | 0.831 | 0.597 | -0.744 | 0.632 | 0.200 | P01244|SOMA_RAT | TDMELLRF |
| TLYGFGG | 0.687 | 0.834 | 0.748 | 0.857 | 0.932 | -0.102 | 0.834 | 0.079 | P62804|H4_RAT | TLYGFGG |
| TPAMHASLDKFLASVSTVLTSKYR | 0.003 | 0.035 | 0.002 | 0.025 | 0.324 | -1.627 | 0.025 | 1.601 | P01946|HBA_RAT | TPAMHASLDKFLASVSTVLTSKYR |
| TPLPELFDRVVML | 0.789 | 0.888 | 0.652 | 0.804 | 0.758 | -0.400 | 0.804 | 0.095 | P01237|PRL_RAT | TPLPELFDRVVML |
| TPLVTLF | 0.109 | 0.270 | 0.088 | 0.240 | 1.560 | 0.642 | 0.240 | 0.619 | P01194|COLI_RAT | TPLVTLF |
| TPLVTLFKNAIIKN | 0.225 | 0.420 | 0.171 | 0.351 | 1.154 | 0.206 | 0.351 | 0.454 | P01194|COLI_RAT | TPLVTLFKNAIIKN |
| TQESVDSAKPRVY | 0.307 | 0.524 | 0.270 | 0.462 | 0.887 | -0.172 | 0.462 | 0.336 | P01186|NEU2_RAT | TQESVDSAKPRVY |
| VHLTDAEKA | 0.154 | 0.342 | 0.171 | 0.351 | 0.504 | -0.988 | 0.342 | 0.466 | P02091|HBB1_RAT:P11517|HBB2_RAT | VHLTDAEKA |
| VHLTDAEKAAVN | 0.057 | 0.192 | 0.088 | 0.240 | 0.679 | -0.559 | 0.192 | 0.716 | P02091|HBB1_RAT | VHLTDAEKAAVN |
| VHLTDAEKAAVNG | 0.211 | 0.416 | 0.401 | 0.592 | 0.859 | -0.219 | 0.416 | 0.381 | P02091|HBB1_RAT | VHLTDAEKAAVNG |
| VKVGVNGF | 0.001 | 0.025 | 0.001 | 0.023 | 0.498 | -1.006 | 0.023 | 1.639 | P04797|G3P_RAT | VKVGVNGF |
| VKVGVNGFGRIG | 0.126 | 0.295 | 0.151 | 0.326 | 0.722 | -0.469 | 0.295 | 0.530 | P04797|G3P_RAT | VKVGVNGFGRIG |
| VPHFSEEEKEPE | 0.999 | 0.999 | 1.000 | 1.000 | 1.050 | 0.070 | 0.999 | 0.000 | P27682|7B2_RAT | VPHFSEEEKEPE |
| VQLAGTQESVDSAKP | 0.050 | 0.188 | 0.047 | 0.172 | 1.648 | 0.721 | 0.172 | 0.763 | P01186|NEU2_RAT | VQLAGTQESVDSAKP |
| VQLAGTQESVDSAKPR | 0.544 | 0.719 | 0.171 | 0.351 | 1.499 | 0.584 | 0.351 | 0.454 | P01186|NEU2_RAT | VQLAGTQESVDSAKPR |
| VQLAGTQESVDSAKPRV | 0.067 | 0.201 | 0.101 | 0.256 | 2.319 | 1.214 | 0.201 | 0.697 | P01186|NEU2_RAT | VQLAGTQESVDSAKPRV |
| VQLAGTQESVDSAKPRVY | 0.825 | 0.888 | 0.847 | 0.945 | 1.144 | 0.194 | 0.888 | 0.051 | P01186|NEU2_RAT | VQLAGTQESVDSAKPRVY |
| WSRMDQLAKELT | 0.352 | 0.560 | 0.300 | 0.487 | 1.300 | 0.379 | 0.487 | 0.312 | P10354|CMGA_RAT | WSRMDQLAKELT |
| WSRMDQLAKELTAE | 0.052 | 0.188 | 0.056 | 0.186 | 1.507 | 0.592 | 0.186 | 0.730 | P10354|CMGA_RAT | WSRMDQLAKELTAE |
| Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF | 0.044 | 0.167 | 0.056 | 0.186 | 2.155 | 1.108 | 0.167 | 0.777 | P01194|COLI_RAT | Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF |
| Y(+42.01)GGFMTSEK | 0.762 | 0.873 | 0.898 | 0.956 | 0.911 | -0.135 | 0.873 | 0.059 | P01194|COLI_RAT | Y(+42.01)GGFMTSEK |
| Y(+42.01)GGFMTSEKSQ | 0.815 | 0.888 | 0.898 | 0.956 | 0.967 | -0.049 | 0.888 | 0.051 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQ |
| Y(+42.01)GGFMTSEKSQTP | 0.004 | 0.038 | 0.007 | 0.054 | 1.969 | 0.977 | 0.038 | 1.420 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTP |
| Y(+42.01)GGFMTSEKSQTPL | 0.102 | 0.261 | 0.133 | 0.316 | 1.331 | 0.412 | 0.261 | 0.583 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPL |
| Y(+42.01)GGFMTSEKSQTPLV | 0.322 | 0.544 | 0.438 | 0.625 | 1.157 | 0.210 | 0.544 | 0.264 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLV |
| Y(+42.01)GGFMTSEKSQTPLVT | 0.420 | 0.632 | 0.478 | 0.664 | 1.045 | 0.064 | 0.632 | 0.200 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVT |
| Y(+42.01)GGFMTSEKSQTPLVTL | 0.568 | 0.734 | 0.949 | 0.966 | 0.996 | -0.006 | 0.734 | 0.134 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTL |
| Y(+42.01)GGFMTSEKSQTPLVTLF | 0.066 | 0.201 | 0.116 | 0.281 | 1.101 | 0.138 | 0.201 | 0.697 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLF |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK | 0.241 | 0.439 | 0.193 | 0.373 | 1.040 | 0.057 | 0.373 | 0.429 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN | 0.509 | 0.687 | 0.243 | 0.423 | 0.992 | -0.012 | 0.423 | 0.373 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN |
| Y(+42.01)SMEHFRWGKPV(-.98) | 0.001 | 0.025 | 0.002 | 0.023 | 2.444 | 1.289 | 0.023 | 1.630 | P01194|COLI_RAT | Y(+42.01)SMEHFRWGKPV(-.98) |
| YEENSRENPF | 0.037 | 0.157 | 0.023 | 0.123 | 1.781 | 0.833 | 0.123 | 0.909 | P10362|SCG2_RAT | YEENSRENPF |
| YGGFLRKYP | 0.023 | 0.120 | 0.019 | 0.109 | 1.926 | 0.946 | 0.109 | 0.964 | P06300|PDYN_RAT | YGGFLRKYP |
| YGGFLRKYPK | 0.077 | 0.223 | 0.034 | 0.156 | 1.715 | 0.778 | 0.156 | 0.807 | P06300|PDYN_RAT | YGGFLRKYPK |
| YGGFLRRI | 0.059 | 0.192 | 0.040 | 0.156 | 1.339 | 0.421 | 0.156 | 0.807 | P06300|PDYN_RAT | YGGFLRRI |
| YGGFLRRQFKVVT | 0.186 | 0.381 | 0.151 | 0.326 | 1.264 | 0.338 | 0.326 | 0.486 | P06300|PDYN_RAT | YGGFLRRQFKVVT |
| YGGFMTSEKSQTPLVT | 0.512 | 0.687 | 0.748 | 0.857 | 1.058 | 0.081 | 0.687 | 0.163 | P01194|COLI_RAT | YGGFMTSEKSQTPLVT |
| YGGFMTSEKSQTPLVTL | 0.019 | 0.113 | 0.013 | 0.081 | 2.099 | 1.070 | 0.081 | 1.092 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTL |
| YGGFMTSEKSQTPLVTLF | 0.914 | 0.943 | 0.949 | 0.966 | 1.060 | 0.084 | 0.943 | 0.026 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTLF |
| YGGFMTSEKSQTPLVTLFKNAIIKN | 0.704 | 0.837 | 0.949 | 0.966 | 0.781 | -0.356 | 0.837 | 0.077 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTLFKNAIIKN |
| YKVNEYQGPVAPSGGFFLFRPRN(-.98) | 0.703 | 0.837 | 0.606 | 0.777 | 0.867 | -0.206 | 0.777 | 0.110 | P12760|NMU_RAT | YKVNEYQGPVAPSGGFFLFRPRN(-.98) |
# get DE features only tibble
uni_res_filt <- uni_res %>%
dplyr::filter(BHT < FDR & BHW < FDR) %>%
mutate(status = case_when(`FC(log2)` < - 0.6 ~ "Down",
`FC(log2)` > 0.6 ~ "Up") )
if (nrow(uni_res_filt) == 0){
print(paste("There is no significant differentiated features between",
temp_d$Label[2], "and", temp_d$Label[1], sep = " "))
} else {
uni_res_filt = uni_res_filt %>%
left_join(., feature_meta, by = c("variable" = "Peptide"))
#write.csv(uni_res_filt, file = paste(combo_list[[i]][1], "vs", combo_list[[i]][2], ".csv", sep = ""))
uni_res_filt %>%
#mutate(across(-c(variable, status), round, digit=3)) %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")
}| variable | pT | BHT | pW | BHW | FC(lin) | FC(log2) | padj | -log10padj | status | Accession | org_peptide_name |
|---|---|---|---|---|---|---|---|---|---|---|---|
| EGFFRLT | 0.005 | 0.049 | 0.002 | 0.023 | 0.657 | -0.605 | 0.023 | 1.630 | Down | P01186|NEU2_RAT | EGFFRLT |
| FPAMPLSSLFA | 0.003 | 0.035 | 0.002 | 0.023 | 0.295 | -1.761 | 0.023 | 1.630 | Down | P01244|SOMA_RAT | FPAMPLSSLFA |
| FPAMPLSSLFAN | 0.002 | 0.029 | 0.002 | 0.025 | 0.323 | -1.630 | 0.025 | 1.601 | Down | P01244|SOMA_RAT | FPAMPLSSLFAN |
| FPAMPLSSLFANAVLRAQH | 0.000 | 0.001 | 0.000 | 0.002 | 0.414 | -1.274 | 0.001 | 3.163 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQH |
| FPAMPLSSLFANAVLRAQHLH | 0.001 | 0.023 | 0.001 | 0.019 | 0.481 | -1.056 | 0.019 | 1.722 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLH |
| FPAMPLSSLFANAVLRAQHLHQ | 0.000 | 0.012 | 0.000 | 0.010 | 0.539 | -0.892 | 0.010 | 1.984 | Down | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQ |
| LDEGHDPV | 0.001 | 0.023 | 0.001 | 0.018 | 2.018 | 1.013 | 0.018 | 1.746 | Up | O35314|SCG1_RAT | LDEGHDPV |
| LDEGHDPVHESPV | 0.002 | 0.029 | 0.004 | 0.037 | 2.057 | 1.040 | 0.029 | 1.540 | Up | O35314|SCG1_RAT | LDEGHDPVHESPV |
| LLDEGHDPVHESPVDTA | 0.002 | 0.025 | 0.001 | 0.019 | 1.833 | 0.874 | 0.019 | 1.722 | Up | O35314|SCG1_RAT | LLDEGHDPVHESPVDTA |
| PESAFSE | 0.001 | 0.023 | 0.001 | 0.015 | 1.948 | 0.962 | 0.015 | 1.821 | Up | P01179|NEU1_RAT | PESAFSE |
| PVHESPVDTA | 0.002 | 0.029 | 0.001 | 0.015 | 2.250 | 1.170 | 0.015 | 1.821 | Up | O35314|SCG1_RAT | PVHESPVDTA |
| Q(-17.03)KIAEKFSQ | 0.000 | 0.012 | 0.000 | 0.010 | 2.080 | 1.057 | 0.010 | 1.984 | Up | O35314|SCG1_RAT | Q(-17.03)KIAEKFSQ |
| SVPHFSEEEKEPE | 0.001 | 0.025 | 0.000 | 0.015 | 1.737 | 0.796 | 0.015 | 1.821 | Up | P27682|7B2_RAT | SVPHFSEEEKEPE |
| TPAMHASLDKFLASVSTVLTSKYR | 0.003 | 0.035 | 0.002 | 0.025 | 0.324 | -1.627 | 0.025 | 1.601 | Down | P01946|HBA_RAT | TPAMHASLDKFLASVSTVLTSKYR |
| VKVGVNGF | 0.001 | 0.025 | 0.001 | 0.023 | 0.498 | -1.006 | 0.023 | 1.639 | Down | P04797|G3P_RAT | VKVGVNGF |
| Y(+42.01)SMEHFRWGKPV(-.98) | 0.001 | 0.025 | 0.002 | 0.023 | 2.444 | 1.289 | 0.023 | 1.630 | Up | P01194|COLI_RAT | Y(+42.01)SMEHFRWGKPV(-.98) |
# volcano plot
volcano_plot(uni_res_annotation, feature_col = "variable", fdr = FDR, log2fc = LOG2FC, save = FALSE)# heatmap
anno <- data.frame(Label = as.factor(t(d5)[, "class"])) %>%
dplyr::filter(Label %in% contrast ) %>%
droplevels()
hm <- d5[-1, d5[1,] %in% contrast ] %>%
rownames_to_column("variable") %>%
mutate(across(-variable, as.numeric)) #%>%
#left_join(., feature_meta, by = c("variable" = "Feature"))
heatmap(hm, feature_col = "variable", sample_anno = anno, feature_anno = feature_meta, feature_label = "Peptide", rowname_switch = TRUE, save = FALSE)contrast = combo_list[[3]]
df = d5_mod %>%
dplyr::filter(., Label %in% contrast ) %>%
droplevels()
temp_d <- df %>%
mutate(across(-Label, ~ 2^(.) )) %>% # d3_mod is log-scale number, this step will de-log and change data back to linear number
group_by(Label) %>%
summarise(across(everything(), mean))
print(paste("Order of Fold Change:", temp_d$Label[2], "over", temp_d$Label[1], sep = " "))[1] "Order of Fold Change: SP over No"
uni_res = do_univariate(df, order = c("No", "SP"))
uni_res <- uni_res %>%
rowwise() %>%
mutate(padj = min(c(BHT, BHW))) %>%
# get the lowest padj
ungroup() %>%
mutate(`-log10padj` = -log10(padj))
uni_res_annotation = uni_res %>% left_join(., feature_meta, by = c("variable" = "Peptide"))
uni_res_annotation %>%
#mutate(across(-variable, round, digit=3)) %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")| variable | pT | BHT | pW | BHW | FC(lin) | FC(log2) | padj | -log10padj | Accession | org_peptide_name |
|---|---|---|---|---|---|---|---|---|---|---|
| A(+42.01)AYKLVLIRH | 0.030 | 0.483 | 0.013 | 0.348 | 1.580 | 0.660 | 0.348 | 0.459 | P25113|PGAM1_RAT | A(+42.01)AYKLVLIRH |
| A(+42.01)AYKLVLIRHGE | 0.642 | 0.973 | 0.756 | 0.984 | 1.245 | 0.316 | 0.973 | 0.012 | P25113|PGAM1_RAT | A(+42.01)AYKLVLIRHGE |
| AAFQKVVAGVASALAHKYH | 0.164 | 0.659 | 0.251 | 0.909 | 1.465 | 0.551 | 0.659 | 0.181 | P02091|HBB1_RAT:P11517|HBB2_RAT | AAFQKVVAGVASALAHKYH |
| AEAFPLEF | 0.329 | 0.868 | 0.282 | 0.909 | 0.758 | -0.400 | 0.868 | 0.062 | P01194|COLI_RAT | AEAFPLEF |
| AEEETAGGDGRPEPSP | 0.464 | 0.874 | 0.756 | 0.984 | 0.914 | -0.129 | 0.874 | 0.058 | P01194|COLI_RAT | AEEETAGGDGRPEPSP |
| AEEETAGGDGRPEPSPR | 0.395 | 0.868 | 0.557 | 0.963 | 0.837 | -0.257 | 0.868 | 0.062 | P01194|COLI_RAT | AEEETAGGDGRPEPSPR |
| AEEETAGGDGRPEPSPRE(-.98) | 0.584 | 0.933 | 0.557 | 0.963 | 0.878 | -0.188 | 0.933 | 0.030 | P01194|COLI_RAT | AEEETAGGDGRPEPSPRE(-.98) |
| AFQKVVAGVASALAHKYH | 0.944 | 0.979 | 0.705 | 0.984 | 1.218 | 0.284 | 0.979 | 0.009 | P02091|HBB1_RAT:P11517|HBB2_RAT | AFQKVVAGVASALAHKYH |
| AGTQESVDSAKP | 0.055 | 0.496 | 0.072 | 0.562 | 0.716 | -0.482 | 0.496 | 0.304 | P01186|NEU2_RAT | AGTQESVDSAKP |
| AGTQESVDSAKPRVY | 0.131 | 0.612 | 0.132 | 0.637 | 0.729 | -0.455 | 0.612 | 0.214 | P01186|NEU2_RAT | AGTQESVDSAKPRVY |
| AKVAVLGA | 0.529 | 0.885 | 0.512 | 0.963 | 0.872 | -0.197 | 0.885 | 0.053 | P04636|MDHM_RAT | AKVAVLGA |
| AQAAFQKVVAGVASALAHKYH | 0.061 | 0.496 | 0.043 | 0.503 | 1.488 | 0.573 | 0.496 | 0.304 | P02091|HBB1_RAT:P11517|HBB2_RAT | AQAAFQKVVAGVASALAHKYH |
| ASALAHKYH | 0.683 | 0.973 | 0.863 | 0.984 | 0.913 | -0.131 | 0.973 | 0.012 | P02091|HBB1_RAT:P11517|HBB2_RAT | ASALAHKYH |
| ASLDKFLASVSTVLTSKYR | 0.369 | 0.868 | 0.605 | 0.963 | 1.155 | 0.208 | 0.868 | 0.062 | P01946|HBA_RAT | ASLDKFLASVSTVLTSKYR |
| AVDQDLGPEVPPENVL(-.98) | 0.242 | 0.779 | 0.099 | 0.622 | 0.720 | -0.475 | 0.622 | 0.206 | Q9QXU9|PCS1N_RAT | AVDQDLGPEVPPENVL(-.98) |
| DEGHDPVHESPVDTA | 0.292 | 0.866 | 0.512 | 0.963 | 0.867 | -0.206 | 0.866 | 0.062 | O35314|SCG1_RAT | DEGHDPVHESPVDTA |
| DPVHESPVDT | 0.457 | 0.874 | 0.512 | 0.963 | 1.101 | 0.138 | 0.874 | 0.058 | O35314|SCG1_RAT | DPVHESPVDT |
| DPVHESPVDTA | 0.958 | 0.979 | 0.756 | 0.984 | 1.063 | 0.088 | 0.979 | 0.009 | O35314|SCG1_RAT | DPVHESPVDTA |
| EAFPLEF | 0.049 | 0.496 | 0.061 | 0.556 | 0.613 | -0.706 | 0.496 | 0.304 | P01194|COLI_RAT | EAFPLEF |
| EEETAGGDGRPEPSPRE(-.98) | 0.409 | 0.868 | 0.605 | 0.963 | 0.863 | -0.212 | 0.868 | 0.062 | P01194|COLI_RAT | EEETAGGDGRPEPSPRE(-.98) |
| EETAGGDGRPEPSPRE(-.98) | 0.157 | 0.659 | 0.061 | 0.556 | 0.557 | -0.844 | 0.556 | 0.255 | P01194|COLI_RAT | EETAGGDGRPEPSPRE(-.98) |
| EGFFRLT | 0.394 | 0.868 | 0.512 | 0.963 | 1.117 | 0.159 | 0.868 | 0.062 | P01186|NEU2_RAT | EGFFRLT |
| ELDQLLHY | 0.979 | 0.991 | 0.973 | 0.985 | 1.092 | 0.127 | 0.985 | 0.007 | O35314|SCG1_RAT | ELDQLLHY |
| ELEGEQPD | 0.130 | 0.612 | 0.114 | 0.626 | 0.750 | -0.416 | 0.612 | 0.214 | P01194|COLI_RAT | ELEGEQPD |
| ESVDSAKPRVY | 0.992 | 0.993 | 0.918 | 0.984 | 0.890 | -0.169 | 0.984 | 0.007 | P01186|NEU2_RAT | ESVDSAKPRVY |
| F(+42.01)PAMPLSSLFANAVLRAQHLH | 0.507 | 0.878 | 0.863 | 0.984 | 0.683 | -0.550 | 0.878 | 0.057 | P01244|SOMA_RAT | F(+42.01)PAMPLSSLFANAVLRAQHLH |
| FLASVSTVLTSKYR | 0.492 | 0.876 | 0.654 | 0.975 | 1.114 | 0.156 | 0.876 | 0.057 | P01946|HBA_RAT | FLASVSTVLTSKYR |
| FMTSEKSQTP | 0.374 | 0.868 | 0.468 | 0.959 | 0.844 | -0.244 | 0.868 | 0.062 | P01194|COLI_RAT | FMTSEKSQTP |
| FNPYFDPL | 0.382 | 0.868 | 0.426 | 0.932 | 0.799 | -0.324 | 0.868 | 0.062 | O35314|SCG1_RAT | FNPYFDPL |
| FPAM(+15.99)PLSSLFANAVLR | 0.165 | 0.659 | 0.251 | 0.909 | 0.598 | -0.743 | 0.659 | 0.181 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLR |
| FPAM(+15.99)PLSSLFANAVLRAQH | 0.229 | 0.773 | 0.282 | 0.909 | 0.727 | -0.460 | 0.773 | 0.112 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLRAQH |
| FPAM(+15.99)PLSSLFANAVLRAQHLH | 0.844 | 0.979 | 0.918 | 0.984 | 1.006 | 0.008 | 0.979 | 0.009 | P01244|SOMA_RAT | FPAM(+15.99)PLSSLFANAVLRAQHLH |
| FPAMPLS | 0.923 | 0.979 | 0.973 | 0.985 | 1.003 | 0.004 | 0.979 | 0.009 | P01244|SOMA_RAT | FPAMPLS |
| FPAMPLSS | 0.408 | 0.868 | 0.557 | 0.963 | 1.298 | 0.376 | 0.868 | 0.062 | P01244|SOMA_RAT | FPAMPLSS |
| FPAMPLSSL | 0.767 | 0.973 | 0.918 | 0.984 | 1.118 | 0.161 | 0.973 | 0.012 | P01244|SOMA_RAT | FPAMPLSSL |
| FPAMPLSSLF | 0.097 | 0.552 | 0.114 | 0.626 | 0.726 | -0.461 | 0.552 | 0.258 | P01244|SOMA_RAT | FPAMPLSSLF |
| FPAMPLSSLFA | 0.278 | 0.860 | 0.282 | 0.909 | 0.695 | -0.525 | 0.860 | 0.066 | P01244|SOMA_RAT | FPAMPLSSLFA |
| FPAMPLSSLFAN | 0.307 | 0.866 | 0.468 | 0.959 | 0.744 | -0.427 | 0.866 | 0.062 | P01244|SOMA_RAT | FPAMPLSSLFAN |
| FPAMPLSSLFANA | 0.057 | 0.496 | 0.072 | 0.562 | 0.502 | -0.994 | 0.496 | 0.304 | P01244|SOMA_RAT | FPAMPLSSLFANA |
| FPAMPLSSLFANAVLR | 0.104 | 0.552 | 0.036 | 0.488 | 0.621 | -0.688 | 0.488 | 0.312 | P01244|SOMA_RAT | FPAMPLSSLFANAVLR |
| FPAMPLSSLFANAVLRA | 0.010 | 0.324 | 0.006 | 0.326 | 0.420 | -1.250 | 0.324 | 0.490 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRA |
| FPAMPLSSLFANAVLRAQ | 0.016 | 0.375 | 0.010 | 0.331 | 0.565 | -0.824 | 0.331 | 0.480 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQ |
| FPAMPLSSLFANAVLRAQH | 0.092 | 0.552 | 0.173 | 0.729 | 0.733 | -0.448 | 0.552 | 0.258 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQH |
| FPAMPLSSLFANAVLRAQHLH | 0.342 | 0.868 | 0.314 | 0.909 | 0.845 | -0.243 | 0.868 | 0.062 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLH |
| FPAMPLSSLFANAVLRAQHLHQ | 0.305 | 0.866 | 0.197 | 0.808 | 0.853 | -0.230 | 0.808 | 0.092 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQ |
| FPAMPLSSLFANAVLRAQHLHQL | 0.064 | 0.496 | 0.029 | 0.483 | 0.524 | -0.932 | 0.483 | 0.316 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQL |
| FPAMPLSSLFANAVLRAQHLHQLA | 0.049 | 0.496 | 0.024 | 0.440 | 0.541 | -0.887 | 0.440 | 0.356 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLA |
| FPAMPLSSLFANAVLRAQHLHQLAAD | 0.004 | 0.305 | 0.006 | 0.326 | 0.427 | -1.229 | 0.305 | 0.516 | P01244|SOMA_RAT | FPAMPLSSLFANAVLRAQHLHQLAAD |
| FPKPEGSQD | 0.091 | 0.552 | 0.314 | 0.909 | 0.753 | -0.410 | 0.552 | 0.258 | P47868|SCG3_RAT | FPKPEGSQD |
| FPKPEGSQDKSLHN | 0.764 | 0.973 | 0.863 | 0.984 | 1.036 | 0.051 | 0.973 | 0.012 | P47868|SCG3_RAT | FPKPEGSQDKSLHN |
| GPNLVARSKEALA | 0.379 | 0.868 | 0.282 | 0.909 | 1.188 | 0.249 | 0.868 | 0.062 | P02770|ALBU_RAT | GPNLVARSKEALA |
| GPVQFLSRIF | 0.032 | 0.483 | 0.051 | 0.526 | 1.629 | 0.704 | 0.483 | 0.316 | P01244|SOMA_RAT | GPVQFLSRIF |
| GPYRVEHF | 0.956 | 0.979 | 1.000 | 1.000 | 1.048 | 0.068 | 0.979 | 0.009 | P01194|COLI_RAT | GPYRVEHF |
| GPYRVEHFRWGNPPKD | 0.738 | 0.973 | 0.426 | 0.932 | 1.271 | 0.346 | 0.932 | 0.031 | P01194|COLI_RAT | GPYRVEHFRWGNPPKD |
| GRGREPGAYPALDSRQE | 0.682 | 0.973 | 0.756 | 0.984 | 0.929 | -0.107 | 0.973 | 0.012 | O35314|SCG1_RAT | GRGREPGAYPALDSRQE |
| GRTLYGFGG | 0.913 | 0.979 | 0.654 | 0.975 | 1.031 | 0.045 | 0.975 | 0.011 | P62804|H4_RAT | GRTLYGFGG |
| GTQESVDSAKPRVY | 0.059 | 0.496 | 0.132 | 0.637 | 0.839 | -0.254 | 0.496 | 0.304 | P01186|NEU2_RAT | GTQESVDSAKPRVY |
| GVASALAHKYH | 0.732 | 0.973 | 0.705 | 0.984 | 1.067 | 0.093 | 0.973 | 0.012 | P02091|HBB1_RAT:P11517|HBB2_RAT | GVASALAHKYH |
| IKMALQQEGFD | 0.667 | 0.973 | 0.605 | 0.963 | 1.658 | 0.729 | 0.963 | 0.016 | P28841|NEC2_RAT | IKMALQQEGFD |
| KYVMGHF | 0.192 | 0.722 | 0.282 | 0.909 | 0.869 | -0.202 | 0.722 | 0.141 | P01194|COLI_RAT | KYVMGHF |
| KYVMGHFRWD | 0.918 | 0.979 | 0.863 | 0.984 | 0.836 | -0.258 | 0.979 | 0.009 | P01194|COLI_RAT | KYVMGHFRWD |
| LDEGHDPV | 0.060 | 0.496 | 0.099 | 0.622 | 0.759 | -0.398 | 0.496 | 0.304 | O35314|SCG1_RAT | LDEGHDPV |
| LDEGHDPVHESPV | 0.740 | 0.973 | 0.918 | 0.984 | 1.136 | 0.184 | 0.973 | 0.012 | O35314|SCG1_RAT | LDEGHDPVHESPV |
| LENSSPQAPA | 0.312 | 0.866 | 0.349 | 0.909 | 0.853 | -0.230 | 0.866 | 0.062 | Q9QXU9|PCS1N_RAT | LENSSPQAPA |
| LENSSPQAPARRLLPP | 0.690 | 0.973 | 0.756 | 0.984 | 0.977 | -0.034 | 0.973 | 0.012 | Q9QXU9|PCS1N_RAT | LENSSPQAPARRLLPP |
| LLDEGHDPVHESPVD | 0.703 | 0.973 | 0.863 | 0.984 | 1.094 | 0.130 | 0.973 | 0.012 | O35314|SCG1_RAT | LLDEGHDPVHESPVD |
| LLDEGHDPVHESPVDT | 0.436 | 0.874 | 0.349 | 0.909 | 0.848 | -0.238 | 0.874 | 0.058 | O35314|SCG1_RAT | LLDEGHDPVHESPVDT |
| LLDEGHDPVHESPVDTA | 0.852 | 0.979 | 0.654 | 0.975 | 1.012 | 0.017 | 0.975 | 0.011 | O35314|SCG1_RAT | LLDEGHDPVHESPVDTA |
| LLRALASSNARAQQ | 0.328 | 0.868 | 0.605 | 0.963 | 0.898 | -0.156 | 0.868 | 0.062 | Q792G6|GNAS3_RAT | LLRALASSNARAQQ |
| LPGLLLF | 0.101 | 0.552 | 0.099 | 0.622 | 0.656 | -0.607 | 0.552 | 0.258 | P01230|LSHB_RAT | LPGLLLF |
| LPHLPGLLLF | 0.083 | 0.552 | 0.085 | 0.622 | 0.547 | -0.870 | 0.552 | 0.258 | P01230|LSHB_RAT | LPHLPGLLLF |
| LVQLAGTQESVDSAKPRVY | 0.719 | 0.973 | 0.512 | 0.963 | 1.082 | 0.114 | 0.963 | 0.016 | P01186|NEU2_RAT | LVQLAGTQESVDSAKPRVY |
| MDQLAKELT | 0.299 | 0.866 | 0.426 | 0.932 | 0.768 | -0.380 | 0.866 | 0.062 | P10354|CMGA_RAT | MDQLAKELT |
| MDQLAKELTAE | 0.796 | 0.973 | 0.756 | 0.984 | 0.873 | -0.197 | 0.973 | 0.012 | P10354|CMGA_RAT | MDQLAKELTAE |
| MQIFVKTL | 0.816 | 0.973 | 0.918 | 0.984 | 1.015 | 0.021 | 0.973 | 0.012 | P62982|RS27A_RAT:P62986|RL40_RAT:P0CG51|UBB_RAT:Q63429|UBC_RAT | MQIFVKTL |
| NPYFDPLQWKNSDFE | 0.690 | 0.973 | 0.605 | 0.963 | 0.866 | -0.208 | 0.963 | 0.016 | O35314|SCG1_RAT | NPYFDPLQWKNSDFE |
| NQEQAEQGREHL | 0.533 | 0.885 | 0.705 | 0.984 | 0.736 | -0.441 | 0.885 | 0.053 | P10362|SCG2_RAT | NQEQAEQGREHL |
| PESAFSE | 0.025 | 0.450 | 0.043 | 0.503 | 0.676 | -0.565 | 0.450 | 0.347 | P01179|NEU1_RAT | PESAFSE |
| PHFLYPK | 0.477 | 0.874 | 0.387 | 0.932 | 0.889 | -0.169 | 0.874 | 0.058 | P05371|CLUS_RAT | PHFLYPK |
| PMFIVNTNVPRA | 0.812 | 0.973 | 0.973 | 0.985 | 0.967 | -0.048 | 0.973 | 0.012 | P30904|MIF_RAT | PMFIVNTNVPRA |
| PVHESPVDTA | 0.078 | 0.552 | 0.072 | 0.562 | 0.705 | -0.504 | 0.552 | 0.258 | O35314|SCG1_RAT | PVHESPVDTA |
| PVQFLSRIF | 0.203 | 0.722 | 0.349 | 0.909 | 1.251 | 0.323 | 0.722 | 0.141 | P01244|SOMA_RAT | PVQFLSRIF |
| Q(-17.03)ELGKLTGPSNQ | 0.704 | 0.973 | 0.918 | 0.984 | 1.071 | 0.100 | 0.973 | 0.012 | P10362|SCG2_RAT | Q(-17.03)ELGKLTGPSNQ |
| Q(-17.03)EPGAPAAGM | 0.718 | 0.973 | 0.863 | 0.984 | 1.115 | 0.157 | 0.973 | 0.012 | P15087|CBPE_RAT | Q(-17.03)EPGAPAAGM |
| Q(-17.03)EPGAPAAGM(+15.99) | 0.804 | 0.973 | 0.756 | 0.984 | 1.030 | 0.042 | 0.973 | 0.012 | P15087|CBPE_RAT | Q(-17.03)EPGAPAAGM(+15.99) |
| Q(-17.03)KIAEKFSQ | 0.889 | 0.979 | 0.282 | 0.909 | 0.733 | -0.449 | 0.909 | 0.041 | O35314|SCG1_RAT | Q(-17.03)KIAEKFSQ |
| Q(-17.03)KIAEKFSQR(-.98) | 0.471 | 0.874 | 0.557 | 0.963 | 0.936 | -0.096 | 0.874 | 0.058 | O35314|SCG1_RAT | Q(-17.03)KIAEKFSQR(-.98) |
| QAAFQKVVAGVASALAHKYH | 0.212 | 0.740 | 0.223 | 0.871 | 1.480 | 0.565 | 0.740 | 0.131 | P02091|HBB1_RAT:P11517|HBB2_RAT | QAAFQKVVAGVASALAHKYH |
| R(+42.01)PVKVYPNVAENESAEAFPLEF | 0.361 | 0.868 | 0.387 | 0.932 | 0.627 | -0.673 | 0.868 | 0.062 | P01194|COLI_RAT | R(+42.01)PVKVYPNVAENESAEAFPLEF |
| RAEEETAGGDGRPEPSPRE(-.98) | 0.604 | 0.952 | 0.756 | 0.984 | 0.695 | -0.525 | 0.952 | 0.021 | P01194|COLI_RAT | RAEEETAGGDGRPEPSPRE(-.98) |
| RPVKVYPNVAENE | 0.890 | 0.979 | 0.918 | 0.984 | 1.051 | 0.071 | 0.979 | 0.009 | P01194|COLI_RAT | RPVKVYPNVAENE |
| RPVKVYPNVAENES(+79.97)AEAFPLE | 0.148 | 0.656 | 0.314 | 0.909 | 0.833 | -0.263 | 0.656 | 0.183 | P01194|COLI_RAT | RPVKVYPNVAENES(+79.97)AEAFPLE |
| RPVKVYPNVAENES(+79.97)AEAFPLEF | 0.004 | 0.305 | 0.003 | 0.326 | 0.397 | -1.331 | 0.305 | 0.516 | P01194|COLI_RAT | RPVKVYPNVAENES(+79.97)AEAFPLEF |
| RPVKVYPNVAENESAEAFPLE | 0.887 | 0.979 | 0.973 | 0.985 | 1.024 | 0.035 | 0.979 | 0.009 | P01194|COLI_RAT | RPVKVYPNVAENESAEAFPLE |
| RPVKVYPNVAENESAEAFPLEF | 0.367 | 0.868 | 0.314 | 0.909 | 0.893 | -0.164 | 0.868 | 0.062 | P01194|COLI_RAT | RPVKVYPNVAENESAEAFPLEF |
| RRPVKVYPNVAENESAEAFPLEF | 0.904 | 0.979 | 0.809 | 0.984 | 0.992 | -0.011 | 0.979 | 0.009 | P01194|COLI_RAT | RRPVKVYPNVAENESAEAFPLEF |
| RTLYGFGG | 0.367 | 0.868 | 0.349 | 0.909 | 0.845 | -0.243 | 0.868 | 0.062 | P62804|H4_RAT | RTLYGFGG |
| S(+42.01)MEHFRWGKPV(-.98) | 0.236 | 0.773 | 0.314 | 0.909 | 0.840 | -0.252 | 0.773 | 0.112 | P01194|COLI_RAT | S(+42.01)MEHFRWGKPV(-.98) |
| S(+42.01)YSMEHF | 0.489 | 0.876 | 0.809 | 0.984 | 1.009 | 0.013 | 0.876 | 0.057 | P01194|COLI_RAT | S(+42.01)YSMEHF |
| S(+42.01)YSMEHFRWGKPV(-.98) | 0.474 | 0.874 | 0.387 | 0.932 | 0.905 | -0.144 | 0.874 | 0.058 | P01194|COLI_RAT | S(+42.01)YSMEHFRWGKPV(-.98) |
| SAEAFPLEF | 0.897 | 0.979 | 0.973 | 0.985 | 1.203 | 0.266 | 0.979 | 0.009 | P01194|COLI_RAT | SAEAFPLEF |
| SAVISLEGKPL | 0.623 | 0.973 | 0.557 | 0.963 | 1.053 | 0.075 | 0.963 | 0.016 | P45592|COF1_RAT | SAVISLEGKPL |
| SEES(+79.97)QEKEY | 0.289 | 0.866 | 0.387 | 0.932 | 0.786 | -0.348 | 0.866 | 0.062 | O35314|SCG1_RAT | SEES(+79.97)QEKEY |
| SLDKFLA | 0.784 | 0.973 | 0.863 | 0.984 | 1.323 | 0.404 | 0.973 | 0.012 | P01946|HBA_RAT | SLDKFLA |
| SLDKFLASVSTVLTSKYR | 0.671 | 0.973 | 0.973 | 0.985 | 0.724 | -0.467 | 0.973 | 0.012 | P01946|HBA_RAT | SLDKFLASVSTVLTSKYR |
| SLKPEFVDIINAKQ | 0.800 | 0.973 | 0.605 | 0.963 | 1.057 | 0.080 | 0.963 | 0.016 | P48500|TPIS_RAT | SLKPEFVDIINAKQ |
| SLSAASAPLAETSTPL | 0.430 | 0.874 | 0.099 | 0.622 | 0.886 | -0.175 | 0.622 | 0.206 | Q9QXU9|PCS1N_RAT | SLSAASAPLAETSTPL |
| SLSAASAPLAETSTPLRL | 0.330 | 0.868 | 0.426 | 0.932 | 0.849 | -0.236 | 0.868 | 0.062 | Q9QXU9|PCS1N_RAT | SLSAASAPLAETSTPLRL |
| SMEHFRWGKPV(-.98) | 0.402 | 0.868 | 0.605 | 0.963 | 1.380 | 0.464 | 0.868 | 0.062 | P01194|COLI_RAT | SMEHFRWGKPV(-.98) |
| SNRVVDLMAYMASKE | 0.413 | 0.868 | 0.468 | 0.959 | 1.226 | 0.294 | 0.868 | 0.062 | P04797|G3P_RAT | SNRVVDLMAYMASKE |
| SPRIGQILK | 0.255 | 0.805 | 0.349 | 0.909 | 1.334 | 0.415 | 0.805 | 0.094 | P01244|SOMA_RAT | SPRIGQILK |
| SPRIGQILKQ | 0.738 | 0.973 | 0.863 | 0.984 | 0.982 | -0.027 | 0.973 | 0.012 | P01244|SOMA_RAT | SPRIGQILKQ |
| SQENPNTYSEDLDV | 0.200 | 0.722 | 0.426 | 0.932 | 0.839 | -0.253 | 0.722 | 0.141 | P06300|PDYN_RAT | SQENPNTYSEDLDV |
| SSEPEAAPAPRRL | 0.022 | 0.443 | 0.036 | 0.488 | 0.682 | -0.553 | 0.443 | 0.354 | Q9QXU9|PCS1N_RAT | SSEPEAAPAPRRL |
| SVDSAKPRVY | 0.094 | 0.552 | 0.223 | 0.871 | 0.591 | -0.758 | 0.552 | 0.258 | P01186|NEU2_RAT | SVDSAKPRVY |
| SVNPYLQ(-.98) | 0.690 | 0.973 | 0.863 | 0.984 | 0.917 | -0.124 | 0.973 | 0.012 | P27682|7B2_RAT | SVNPYLQ(-.98) |
| SVNPYLQGKRLDNVV | 0.891 | 0.979 | 1.000 | 1.000 | 0.941 | -0.088 | 0.979 | 0.009 | P27682|7B2_RAT | SVNPYLQGKRLDNVV |
| SVNPYLQGKRLDNVVA | 0.103 | 0.552 | 0.132 | 0.637 | 1.170 | 0.227 | 0.552 | 0.258 | P27682|7B2_RAT | SVNPYLQGKRLDNVVA |
| SVPHFSEEEKEPE | 0.960 | 0.979 | 0.863 | 0.984 | 0.959 | -0.061 | 0.979 | 0.009 | P27682|7B2_RAT | SVPHFSEEEKEPE |
| SVSTVLTSKYR | 0.928 | 0.979 | 0.918 | 0.984 | 0.897 | -0.156 | 0.979 | 0.009 | P01946|HBA_RAT | SVSTVLTSKYR |
| SYSMEHF | 0.509 | 0.878 | 0.426 | 0.932 | 1.255 | 0.328 | 0.878 | 0.057 | P01194|COLI_RAT | SYSMEHF |
| SYSMEHFRWGKPV(-.98) | 0.869 | 0.979 | 0.918 | 0.984 | 1.098 | 0.135 | 0.979 | 0.009 | P01194|COLI_RAT | SYSMEHFRWGKPV(-.98) |
| TAYAIYMLAMAAFPKKQN | 0.553 | 0.907 | 0.809 | 0.984 | 0.986 | -0.020 | 0.907 | 0.043 | P35171|CX7A2_RAT | TAYAIYMLAMAAFPKKQN |
| TDMELLRF | 0.858 | 0.979 | 0.973 | 0.985 | 0.973 | -0.040 | 0.979 | 0.009 | P01244|SOMA_RAT | TDMELLRF |
| TLYGFGG | 0.231 | 0.773 | 0.152 | 0.673 | 0.860 | -0.218 | 0.673 | 0.172 | P62804|H4_RAT | TLYGFGG |
| TPAMHASLDKFLASVSTVLTSKYR | 0.672 | 0.973 | 0.756 | 0.984 | 0.654 | -0.613 | 0.973 | 0.012 | P01946|HBA_RAT | TPAMHASLDKFLASVSTVLTSKYR |
| TPLPELFDRVVML | 0.745 | 0.973 | 0.387 | 0.932 | 1.659 | 0.730 | 0.932 | 0.031 | P01237|PRL_RAT | TPLPELFDRVVML |
| TPLVTLF | 0.154 | 0.659 | 0.152 | 0.673 | 0.671 | -0.575 | 0.659 | 0.181 | P01194|COLI_RAT | TPLVTLF |
| TPLVTLFKNAIIKN | 0.413 | 0.868 | 0.468 | 0.959 | 1.442 | 0.528 | 0.868 | 0.062 | P01194|COLI_RAT | TPLVTLFKNAIIKN |
| TQESVDSAKPRVY | 0.993 | 0.993 | 0.973 | 0.985 | 0.981 | -0.028 | 0.985 | 0.007 | P01186|NEU2_RAT | TQESVDSAKPRVY |
| VHLTDAEKA | 0.951 | 0.979 | 0.863 | 0.984 | 1.140 | 0.189 | 0.979 | 0.009 | P02091|HBB1_RAT:P11517|HBB2_RAT | VHLTDAEKA |
| VHLTDAEKAAVN | 0.784 | 0.973 | 0.973 | 0.985 | 1.019 | 0.028 | 0.973 | 0.012 | P02091|HBB1_RAT | VHLTDAEKAAVN |
| VHLTDAEKAAVNG | 0.884 | 0.979 | 0.918 | 0.984 | 0.913 | -0.131 | 0.979 | 0.009 | P02091|HBB1_RAT | VHLTDAEKAAVNG |
| VKVGVNGF | 0.507 | 0.878 | 0.605 | 0.963 | 1.147 | 0.198 | 0.878 | 0.057 | P04797|G3P_RAT | VKVGVNGF |
| VKVGVNGFGRIG | 0.441 | 0.874 | 0.654 | 0.975 | 1.178 | 0.236 | 0.874 | 0.058 | P04797|G3P_RAT | VKVGVNGFGRIG |
| VPHFSEEEKEPE | 0.458 | 0.874 | 0.512 | 0.963 | 1.095 | 0.130 | 0.874 | 0.058 | P27682|7B2_RAT | VPHFSEEEKEPE |
| VQLAGTQESVDSAKP | 0.877 | 0.979 | 0.605 | 0.963 | 0.923 | -0.116 | 0.963 | 0.016 | P01186|NEU2_RAT | VQLAGTQESVDSAKP |
| VQLAGTQESVDSAKPR | 0.819 | 0.973 | 0.863 | 0.984 | 0.968 | -0.048 | 0.973 | 0.012 | P01186|NEU2_RAT | VQLAGTQESVDSAKPR |
| VQLAGTQESVDSAKPRV | 0.112 | 0.572 | 0.173 | 0.729 | 0.698 | -0.519 | 0.572 | 0.242 | P01186|NEU2_RAT | VQLAGTQESVDSAKPRV |
| VQLAGTQESVDSAKPRVY | 0.805 | 0.973 | 0.809 | 0.984 | 0.958 | -0.062 | 0.973 | 0.012 | P01186|NEU2_RAT | VQLAGTQESVDSAKPRVY |
| WSRMDQLAKELT | 0.534 | 0.885 | 0.468 | 0.959 | 0.864 | -0.211 | 0.885 | 0.053 | P10354|CMGA_RAT | WSRMDQLAKELT |
| WSRMDQLAKELTAE | 0.634 | 0.973 | 0.756 | 0.984 | 0.979 | -0.031 | 0.973 | 0.012 | P10354|CMGA_RAT | WSRMDQLAKELTAE |
| Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF | 0.014 | 0.375 | 0.020 | 0.440 | 0.472 | -1.084 | 0.375 | 0.426 | P01194|COLI_RAT | Y(+42.01)GGFM(+15.99)TSEKSQTPLVTLF |
| Y(+42.01)GGFMTSEK | 0.516 | 0.882 | 0.426 | 0.932 | 1.273 | 0.348 | 0.882 | 0.055 | P01194|COLI_RAT | Y(+42.01)GGFMTSEK |
| Y(+42.01)GGFMTSEKSQ | 0.962 | 0.979 | 0.863 | 0.984 | 1.158 | 0.212 | 0.979 | 0.009 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQ |
| Y(+42.01)GGFMTSEKSQTP | 0.055 | 0.496 | 0.051 | 0.526 | 0.725 | -0.463 | 0.496 | 0.304 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTP |
| Y(+42.01)GGFMTSEKSQTPL | 0.118 | 0.587 | 0.114 | 0.626 | 0.709 | -0.495 | 0.587 | 0.231 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPL |
| Y(+42.01)GGFMTSEKSQTPLV | 0.448 | 0.874 | 0.654 | 0.975 | 0.850 | -0.235 | 0.874 | 0.058 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLV |
| Y(+42.01)GGFMTSEKSQTPLVT | 0.193 | 0.722 | 0.349 | 0.909 | 0.787 | -0.345 | 0.722 | 0.141 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVT |
| Y(+42.01)GGFMTSEKSQTPLVTL | 0.040 | 0.496 | 0.114 | 0.626 | 0.563 | -0.828 | 0.496 | 0.304 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTL |
| Y(+42.01)GGFMTSEKSQTPLVTLF | 0.007 | 0.324 | 0.024 | 0.440 | 0.390 | -1.360 | 0.324 | 0.490 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLF |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK | 0.102 | 0.552 | 0.132 | 0.637 | 0.704 | -0.507 | 0.552 | 0.258 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIK |
| Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN | 0.009 | 0.324 | 0.008 | 0.326 | 0.535 | -0.903 | 0.324 | 0.490 | P01194|COLI_RAT | Y(+42.01)GGFMTSEKSQTPLVTLFKNAIIKN |
| Y(+42.01)SMEHFRWGKPV(-.98) | 0.480 | 0.874 | 0.809 | 0.984 | 0.809 | -0.306 | 0.874 | 0.058 | P01194|COLI_RAT | Y(+42.01)SMEHFRWGKPV(-.98) |
| YEENSRENPF | 0.202 | 0.722 | 0.152 | 0.673 | 0.735 | -0.444 | 0.673 | 0.172 | P10362|SCG2_RAT | YEENSRENPF |
| YGGFLRKYP | 0.425 | 0.874 | 0.605 | 0.963 | 0.917 | -0.126 | 0.874 | 0.058 | P06300|PDYN_RAT | YGGFLRKYP |
| YGGFLRKYPK | 0.570 | 0.926 | 0.918 | 0.984 | 0.896 | -0.159 | 0.926 | 0.033 | P06300|PDYN_RAT | YGGFLRKYPK |
| YGGFLRRI | 0.830 | 0.979 | 0.863 | 0.984 | 1.017 | 0.024 | 0.979 | 0.009 | P06300|PDYN_RAT | YGGFLRRI |
| YGGFLRRQFKVVT | 0.784 | 0.973 | 0.654 | 0.975 | 1.168 | 0.224 | 0.973 | 0.012 | P06300|PDYN_RAT | YGGFLRRQFKVVT |
| YGGFMTSEKSQTPLVT | 0.789 | 0.973 | 0.557 | 0.963 | 1.484 | 0.569 | 0.963 | 0.016 | P01194|COLI_RAT | YGGFMTSEKSQTPLVT |
| YGGFMTSEKSQTPLVTL | 0.145 | 0.656 | 0.314 | 0.909 | 0.733 | -0.448 | 0.656 | 0.183 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTL |
| YGGFMTSEKSQTPLVTLF | 0.379 | 0.868 | 0.349 | 0.909 | 0.794 | -0.332 | 0.868 | 0.062 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTLF |
| YGGFMTSEKSQTPLVTLFKNAIIKN | 0.767 | 0.973 | 0.557 | 0.963 | 1.209 | 0.273 | 0.963 | 0.016 | P01194|COLI_RAT | YGGFMTSEKSQTPLVTLFKNAIIKN |
| YKVNEYQGPVAPSGGFFLFRPRN(-.98) | 0.586 | 0.933 | 0.654 | 0.975 | 1.086 | 0.120 | 0.933 | 0.030 | P12760|NMU_RAT | YKVNEYQGPVAPSGGFFLFRPRN(-.98) |
# get DE features only tibble
uni_res_filt <- uni_res %>%
dplyr::filter(BHT < FDR & BHW < FDR) %>%
mutate(status = case_when(`FC(log2)` < - 0.6 ~ "Down",
`FC(log2)` > 0.6 ~ "Up") )
if (nrow(uni_res_filt) == 0){
print(paste("There is no significant differentiated features between",
temp_d$Label[2], "and", temp_d$Label[1], sep = " "))
} else {
uni_res_filt = uni_res_filt %>%
left_join(., feature_meta, by = c("variable" = "Peptide"))
#write.csv(uni_res_filt, file = paste(combo_list[[i]][1], "vs", combo_list[[i]][2], ".csv", sep = ""))
uni_res_filt %>%
#mutate(across(-c(variable, status), round, digit=3)) %>%
knitr::kable(., digits = 3, "html") %>%
kableExtra::kable_styling(bootstrap_options = c("striped", "hover", "condensed", "responsive")) %>%
kableExtra::scroll_box(width = "100%", height = "500px")
}[1] "There is no significant differentiated features between SP and No"
# volcano plot
volcano_plot(uni_res_annotation, feature_col = "variable", fdr = FDR, log2fc = LOG2FC, save = FALSE)# heatmap
anno <- data.frame(Label = as.factor(t(d5)[, "class"])) %>%
dplyr::filter(Label %in% contrast ) %>%
droplevels()
hm <- d5[-1, d5[1,] %in% contrast ] %>%
rownames_to_column("variable") %>%
mutate(across(-variable, as.numeric)) #%>%
#left_join(., feature_meta, by = c("variable" = "Feature"))
heatmap(hm, feature_col = "variable", sample_anno = anno, feature_anno = feature_meta, feature_label = "Peptide", rowname_switch = TRUE, save = FALSE)All group heatmaps
# for ordered column without clustering samples
col_order = c("No", "SP", "Iso")
# data wrangling for all group heatmap
norm_d2 = t(norm_d1) %>% as.data.frame()
norm_d3 = norm_d2 %>%
arrange(factor(class, levels = col_order))
norm_d4 = t(norm_d3) %>% as.data.frame()
norm_d4_mod = norm_d4[-1,] %>%
as.data.frame() %>%
rownames_to_column(., var = "rowname") %>%
mutate(across(-rowname, as.numeric)) %>%
column_to_rownames(., var = "rowname")
anno <- data.frame(Label = as.factor(t(norm_d4)[, "class"]))
# levels() only change the name of each level, it doesn't reorder
# factor() to reorder factor level
anno$Label = factor(anno$Label, levels = col_order)
#levels(anno$Label)
rownames(norm_d4_mod) = feature_name$name
heatmap(norm_d4_mod, sample_anno = anno, sample_anno_col = "Label", feature_anno = feature_meta, feature_label = "Peptide", cluster_col_switch = FALSE, rowname_switch = TRUE, save = FALSE)heatmap(norm_d4_mod, sample_anno = anno, sample_anno_col = "Label", feature_anno = feature_meta, feature_label = "Peptide", cluster_col_switch = TRUE, rowname_switch = TRUE, save = FALSE)Reproducibility
The amount of time took to generate the report:
Sys.time() - start_timeTime difference of 22.00739 secs
R session information:
sessionInfo()R version 4.2.1 (2022-06-23 ucrt)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19045)
Matrix products: default
locale:
[1] LC_COLLATE=English_United States.utf8
[2] LC_CTYPE=English_United States.utf8
[3] LC_MONETARY=English_United States.utf8
[4] LC_NUMERIC=C
[5] LC_TIME=English_United States.utf8
attached base packages:
[1] grid stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] plotly_4.10.1 VennDiagram_1.7.3 futile.logger_1.4.3
[4] wesanderson_0.3.6 RColorBrewer_1.1-3 extrafont_0.19
[7] pheatmap_1.0.12 ggrepel_0.9.3 ropls_1.28.2
[10] ProteoMM_1.14.0 pROC_1.18.2 pcaMethods_1.88.0
[13] Biobase_2.56.0 BiocGenerics_0.42.0 proBatch_1.11.0
[16] cowplot_1.1.1 impute_1.70.0 statTarget_1.26.0
[19] knitr_1.43.1 lubridate_1.9.2 forcats_1.0.0
[22] stringr_1.5.0 dplyr_1.1.2 purrr_1.0.1
[25] readr_2.1.4 tidyr_1.3.0 tibble_3.2.1
[28] ggplot2_3.4.2 tidyverse_2.0.0
loaded via a namespace (and not attached):
[1] backports_1.4.1 Hmisc_5.1-0
[3] qqman_0.1.8 corrplot_0.92
[5] systemfonts_1.0.4 plyr_1.8.8
[7] lazyeval_0.2.2 splines_4.2.1
[9] BiocParallel_1.30.4 GenomeInfoDb_1.32.4
[11] sva_3.44.0 digest_0.6.31
[13] foreach_1.5.2 htmltools_0.5.5
[15] viridis_0.6.3 GO.db_3.15.0
[17] fansi_1.0.4 ggfortify_0.4.16
[19] magrittr_2.0.3 checkmate_2.2.0
[21] memoise_2.0.1 cluster_2.1.4
[23] doParallel_1.0.17 tzdb_0.4.0
[25] limma_3.52.4 fastcluster_1.2.3
[27] Biostrings_2.64.1 annotate_1.74.0
[29] matrixStats_0.63.0 svglite_2.1.1
[31] extrafontdb_1.0 timechange_0.2.0
[33] pdist_1.2.1 colorspace_2.1-0
[35] rvest_1.0.3 blob_1.2.4
[37] rrcov_1.7-2 xfun_0.39
[39] crayon_1.5.2 RCurl_1.98-1.12
[41] jsonlite_1.8.4 genefilter_1.78.0
[43] lme4_1.1-33 survival_3.5-5
[45] iterators_1.0.14 glue_1.6.2
[47] kableExtra_1.3.4 gtable_0.3.3
[49] zlibbioc_1.42.0 XVector_0.36.0
[51] webshot_0.5.4 DelayedArray_0.22.0
[53] Rttf2pt1_1.3.12 DEoptimR_1.0-13
[55] scales_1.2.1 futile.options_1.0.1
[57] vsn_3.64.0 mvtnorm_1.1-3
[59] DBI_1.1.3 edgeR_3.38.4
[61] Rcpp_1.0.10 MultiDataSet_1.24.0
[63] viridisLite_0.4.2 xtable_1.8-4
[65] htmlTable_2.4.1 foreign_0.8-84
[67] bit_4.0.5 preprocessCore_1.58.0
[69] Formula_1.2-5 stats4_4.2.1
[71] htmlwidgets_1.6.2 httr_1.4.6
[73] calibrate_1.7.7 farver_2.1.1
[75] pkgconfig_2.0.3 XML_3.99-0.14
[77] nnet_7.3-19 locfit_1.5-9.7
[79] utf8_1.2.3 dynamicTreeCut_1.63-1
[81] labeling_0.4.2 tidyselect_1.2.0
[83] rlang_1.1.1 reshape2_1.4.4
[85] AnnotationDbi_1.58.0 munsell_0.5.0
[87] tools_4.2.1 cachem_1.0.8
[89] cli_3.6.1 generics_0.1.3
[91] RSQLite_2.3.1 pls_2.8-2
[93] evaluate_0.21 fastmap_1.1.1
[95] yaml_2.3.7 bit64_4.0.5
[97] robustbase_0.95-1 randomForest_4.7-1.1
[99] ROC_1.72.0 KEGGREST_1.36.3
[101] nlme_3.1-162 formatR_1.14
[103] xml2_1.3.4 compiler_4.2.1
[105] rstudioapi_0.14 png_0.1-8
[107] affyio_1.66.0 pcaPP_2.0-3
[109] stringi_1.7.12 highr_0.10
[111] lattice_0.21-8 Matrix_1.5-4
[113] nloptr_2.0.3 vctrs_0.6.2
[115] pillar_1.9.0 lifecycle_1.0.3
[117] BiocManager_1.30.20 pvca_1.36.0
[119] data.table_1.14.8 bitops_1.0-7
[121] GenomicRanges_1.48.0 R6_2.5.1
[123] affy_1.74.0 gridExtra_2.3
[125] IRanges_2.30.1 codetools_0.2-19
[127] lambda.r_1.2.4 boot_1.3-28.1
[129] MASS_7.3-60 SummarizedExperiment_1.26.1
[131] withr_2.5.0 S4Vectors_0.34.0
[133] GenomeInfoDbData_1.2.8 MultiAssayExperiment_1.22.0
[135] mgcv_1.8-42 parallel_4.2.1
[137] hms_1.1.3 rpart_4.1.19
[139] minqa_1.2.5 rmarkdown_2.21
[141] MatrixGenerics_1.8.1 WGCNA_1.72-1
[143] base64enc_0.1-3